Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1D4R:B23:B22
Extra
PDB:
ATOM 1 O3' A A 22 13.506 0.113 23.697 1.00 54.46 O
ATOM 2 P C A 23 13.324 -0.423 25.200 1.00 55.84 P
ATOM 3 OP1 C A 23 12.679 0.703 25.918 1.00 52.94 O
ATOM 4 OP2 C A 23 14.576 -1.005 25.734 1.00 57.77 O
ATOM 5 O5' C A 23 12.292 -1.632 25.061 1.00 54.78 O
ATOM 6 C5' C A 23 10.930 -1.393 24.743 1.00 49.93 C
ATOM 7 C4' C A 23 10.259 -2.667 24.281 1.00 47.80 C
ATOM 8 O4' C A 23 10.902 -3.183 23.083 1.00 45.52 O
ATOM 9 C3' C A 23 10.243 -3.852 25.236 1.00 48.44 C
ATOM 10 O3' C A 23 9.229 -3.712 26.241 1.00 47.17 O
ATOM 11 C2' C A 23 9.949 -4.989 24.264 1.00 44.36 C
ATOM 12 O2' C A 23 8.610 -4.972 23.813 1.00 41.39 O
ATOM 13 C1' C A 23 10.858 -4.606 23.096 1.00 47.62 C
ATOM 14 N1 C A 23 12.233 -5.146 23.218 1.00 46.15 N
ATOM 15 C2 C A 23 12.486 -6.461 22.773 1.00 49.98 C
ATOM 16 O2 C A 23 11.566 -7.104 22.247 1.00 41.40 O
ATOM 17 N3 C A 23 13.728 -6.992 22.928 1.00 42.23 N
ATOM 18 C4 C A 23 14.694 -6.266 23.495 1.00 47.87 C
ATOM 19 N4 C A 23 15.878 -6.844 23.677 1.00 46.73 N
ATOM 20 C5 C A 23 14.479 -4.917 23.917 1.00 52.53 C
ATOM 21 C6 C A 23 13.245 -4.403 23.764 1.00 47.57 C
ATOM 22 P C A 24 9.437 -4.390 27.687 1.00 56.41 P
ATOM 23 OP1 C A 24 8.510 -3.695 28.606 1.00 58.93 O
ATOM 24 OP2 C A 24 10.887 -4.429 28.012 1.00 56.20 O
ATOM 25 O5' C A 24 8.933 -5.892 27.499 1.00 53.00 O
TER
ATOM 1 O3' G B 21 19.306 0.435 21.871 1.00 60.32 O
ATOM 2 P A B 22 18.681 -0.098 23.249 1.00 57.57 P
ATOM 3 OP1 A B 22 18.863 1.004 24.227 1.00 59.74 O
ATOM 4 OP2 A B 22 19.200 -1.453 23.573 1.00 56.43 O
ATOM 5 O5' A B 22 17.124 -0.239 22.926 1.00 57.83 O
ATOM 6 C5' A B 22 16.403 0.823 22.301 1.00 53.87 C
ATOM 7 C4' A B 22 15.040 0.344 21.848 1.00 51.64 C
ATOM 8 O4' A B 22 15.163 -0.370 20.585 1.00 55.25 O
ATOM 9 C3' A B 22 14.303 -0.617 22.776 1.00 50.38 C
ATOM 10 O3' A B 22 13.506 0.113 23.697 1.00 54.46 O
ATOM 11 C2' A B 22 13.401 -1.355 21.800 1.00 48.81 C
ATOM 12 O2' A B 22 12.292 -0.558 21.448 1.00 40.83 O
ATOM 13 C1' A B 22 14.337 -1.527 20.600 1.00 50.01 C
ATOM 14 N9 A B 22 15.194 -2.718 20.684 1.00 46.19 N
ATOM 15 C8 A B 22 16.497 -2.789 21.126 1.00 52.80 C
ATOM 16 N7 A B 22 16.993 -4.003 21.119 1.00 49.36 N
ATOM 17 C5 A B 22 15.956 -4.784 20.635 1.00 51.74 C
ATOM 18 C6 A B 22 15.850 -6.166 20.394 1.00 54.50 C
ATOM 19 N6 A B 22 16.843 -7.032 20.634 1.00 57.21 N
ATOM 20 N1 A B 22 14.675 -6.635 19.897 1.00 47.04 N
ATOM 21 C2 A B 22 13.686 -5.759 19.672 1.00 49.82 C
ATOM 22 N3 A B 22 13.665 -4.436 19.867 1.00 42.28 N
ATOM 23 C4 A B 22 14.844 -4.006 20.353 1.00 46.92 C
ATOM 24 P C B 23 13.324 -0.423 25.200 1.00 55.84 P
ATOM 25 OP1 C B 23 12.679 0.703 25.918 1.00 52.94 O
ATOM 26 OP2 C B 23 14.576 -1.005 25.734 1.00 57.77 O
ATOM 27 O5' C B 23 12.292 -1.632 25.061 1.00 54.78 O
TER
ATOM 2 P C A 23 13.324 -0.423 25.200 1.00 55.84 P
ATOM 3 OP1 C A 23 12.679 0.703 25.918 1.00 52.94 O
ATOM 4 OP2 C A 23 14.576 -1.005 25.734 1.00 57.77 O
ATOM 5 O5' C A 23 12.292 -1.632 25.061 1.00 54.78 O
ATOM 6 C5' C A 23 10.930 -1.393 24.743 1.00 49.93 C
ATOM 7 C4' C A 23 10.259 -2.667 24.281 1.00 47.80 C
ATOM 8 O4' C A 23 10.902 -3.183 23.083 1.00 45.52 O
ATOM 9 C3' C A 23 10.243 -3.852 25.236 1.00 48.44 C
ATOM 10 O3' C A 23 9.229 -3.712 26.241 1.00 47.17 O
ATOM 11 C2' C A 23 9.949 -4.989 24.264 1.00 44.36 C
ATOM 12 O2' C A 23 8.610 -4.972 23.813 1.00 41.39 O
ATOM 13 C1' C A 23 10.858 -4.606 23.096 1.00 47.62 C
ATOM 14 N1 C A 23 12.233 -5.146 23.218 1.00 46.15 N
ATOM 15 C2 C A 23 12.486 -6.461 22.773 1.00 49.98 C
ATOM 16 O2 C A 23 11.566 -7.104 22.247 1.00 41.40 O
ATOM 17 N3 C A 23 13.728 -6.992 22.928 1.00 42.23 N
ATOM 18 C4 C A 23 14.694 -6.266 23.495 1.00 47.87 C
ATOM 19 N4 C A 23 15.878 -6.844 23.677 1.00 46.73 N
ATOM 20 C5 C A 23 14.479 -4.917 23.917 1.00 52.53 C
ATOM 21 C6 C A 23 13.245 -4.403 23.764 1.00 47.57 C
ATOM 22 P C A 24 9.437 -4.390 27.687 1.00 56.41 P
ATOM 23 OP1 C A 24 8.510 -3.695 28.606 1.00 58.93 O
ATOM 24 OP2 C A 24 10.887 -4.429 28.012 1.00 56.20 O
ATOM 25 O5' C A 24 8.933 -5.892 27.499 1.00 53.00 O
TER
ATOM 1 O3' G B 21 19.306 0.435 21.871 1.00 60.32 O
ATOM 2 P A B 22 18.681 -0.098 23.249 1.00 57.57 P
ATOM 3 OP1 A B 22 18.863 1.004 24.227 1.00 59.74 O
ATOM 4 OP2 A B 22 19.200 -1.453 23.573 1.00 56.43 O
ATOM 5 O5' A B 22 17.124 -0.239 22.926 1.00 57.83 O
ATOM 6 C5' A B 22 16.403 0.823 22.301 1.00 53.87 C
ATOM 7 C4' A B 22 15.040 0.344 21.848 1.00 51.64 C
ATOM 8 O4' A B 22 15.163 -0.370 20.585 1.00 55.25 O
ATOM 9 C3' A B 22 14.303 -0.617 22.776 1.00 50.38 C
ATOM 10 O3' A B 22 13.506 0.113 23.697 1.00 54.46 O
ATOM 11 C2' A B 22 13.401 -1.355 21.800 1.00 48.81 C
ATOM 12 O2' A B 22 12.292 -0.558 21.448 1.00 40.83 O
ATOM 13 C1' A B 22 14.337 -1.527 20.600 1.00 50.01 C
ATOM 14 N9 A B 22 15.194 -2.718 20.684 1.00 46.19 N
ATOM 15 C8 A B 22 16.497 -2.789 21.126 1.00 52.80 C
ATOM 16 N7 A B 22 16.993 -4.003 21.119 1.00 49.36 N
ATOM 17 C5 A B 22 15.956 -4.784 20.635 1.00 51.74 C
ATOM 18 C6 A B 22 15.850 -6.166 20.394 1.00 54.50 C
ATOM 19 N6 A B 22 16.843 -7.032 20.634 1.00 57.21 N
ATOM 20 N1 A B 22 14.675 -6.635 19.897 1.00 47.04 N
ATOM 21 C2 A B 22 13.686 -5.759 19.672 1.00 49.82 C
ATOM 22 N3 A B 22 13.665 -4.436 19.867 1.00 42.28 N
ATOM 23 C4 A B 22 14.844 -4.006 20.353 1.00 46.92 C
ATOM 24 P C B 23 13.324 -0.423 25.200 1.00 55.84 P
ATOM 25 OP1 C B 23 12.679 0.703 25.918 1.00 52.94 O
ATOM 26 OP2 C B 23 14.576 -1.005 25.734 1.00 57.77 O
ATOM 27 O5' C B 23 12.292 -1.632 25.061 1.00 54.78 O
TER
Atoms:
C2: (12.486,-6.461,22.773)
OP1: (12.679,0.703,25.918)
OP2: (14.576,-1.005,25.734)
C4: (14.694,-6.266,23.495)
O5': (12.292,-1.632,25.061)
C3': (10.243,-3.852,25.236)
C1': (10.858,-4.606,23.096)
O4': (10.902,-3.183,23.083)
C5': (10.930,-1.393,24.743)
P: (13.324,-0.423,25.200)
O2: (11.566,-7.104,22.247)
C4': (10.259,-2.667,24.281)
C2': (9.949,-4.989,24.264)
O2': (8.610,-4.972,23.813)
N1: (12.233,-5.146,23.218)
N3: (13.728,-6.992,22.928)
N4: (15.878,-6.844,23.677)
C6: (13.245,-4.403,23.764)
C5: (14.479,-4.917,23.917)
O3': (9.229,-3.712,26.241)
OP1: (12.679,0.703,25.918)
OP2: (14.576,-1.005,25.734)
C4: (14.694,-6.266,23.495)
O5': (12.292,-1.632,25.061)
C3': (10.243,-3.852,25.236)
C1': (10.858,-4.606,23.096)
O4': (10.902,-3.183,23.083)
C5': (10.930,-1.393,24.743)
P: (13.324,-0.423,25.200)
O2: (11.566,-7.104,22.247)
C4': (10.259,-2.667,24.281)
C2': (9.949,-4.989,24.264)
O2': (8.610,-4.972,23.813)
N1: (12.233,-5.146,23.218)
N3: (13.728,-6.992,22.928)
N4: (15.878,-6.844,23.677)
C6: (13.245,-4.403,23.764)
C5: (14.479,-4.917,23.917)
O3': (9.229,-3.712,26.241)
OP1: (18.863,1.004,24.227)
OP2: (19.200,-1.453,23.573)
C3': (14.303,-0.617,22.776)
C1': (14.337,-1.527,20.600)
C5': (16.403,0.823,22.301)
O4': (15.163,-0.370,20.585)
C8: (16.497,-2.789,21.126)
O2': (12.292,-0.558,21.448)
C6: (15.850,-6.166,20.394)
C5: (15.956,-4.784,20.635)
C4: (14.844,-4.006,20.353)
P: (18.681,-0.098,23.249)
C4': (15.040,0.344,21.848)
C2': (13.401,-1.355,21.800)
C2: (13.686,-5.759,19.672)
N1: (14.675,-6.635,19.897)
N3: (13.665,-4.436,19.867)
N6: (16.843,-7.032,20.634)
N7: (16.993,-4.003,21.119)
N9: (15.194,-2.718,20.684)
O5': (17.124,-0.239,22.926)
O3': (13.506,0.113,23.697)
OP2: (19.200,-1.453,23.573)
C3': (14.303,-0.617,22.776)
C1': (14.337,-1.527,20.600)
C5': (16.403,0.823,22.301)
O4': (15.163,-0.370,20.585)
C8: (16.497,-2.789,21.126)
O2': (12.292,-0.558,21.448)
C6: (15.850,-6.166,20.394)
C5: (15.956,-4.784,20.635)
C4: (14.844,-4.006,20.353)
P: (18.681,-0.098,23.249)
C4': (15.040,0.344,21.848)
C2': (13.401,-1.355,21.800)
C2: (13.686,-5.759,19.672)
N1: (14.675,-6.635,19.897)
N3: (13.665,-4.436,19.867)
N6: (16.843,-7.032,20.634)
N7: (16.993,-4.003,21.119)
N9: (15.194,-2.718,20.684)
O5': (17.124,-0.239,22.926)
O3': (13.506,0.113,23.697)
Image (generated by PyMOL):