ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0333:0318

Extra

PDB:
ATOM 1 O3' C A 332 26.114 141.841 26.965 1.00 50.70 O
ATOM 2 P G A 333 26.396 140.766 25.810 1.00 51.11 P
ATOM 3 OP1 G A 333 27.808 140.905 25.371 1.00 52.08 O
ATOM 4 OP2 G A 333 25.296 140.876 24.824 1.00 55.32 O
ATOM 5 O5' G A 333 26.222 139.390 26.574 1.00 52.01 O
ATOM 6 C5' G A 333 26.714 138.149 26.072 1.00 50.65 C
ATOM 7 C4' G A 333 26.759 137.164 27.214 1.00 52.34 C
ATOM 8 O4' G A 333 25.758 137.528 28.203 1.00 52.72 O
ATOM 9 C3' G A 333 26.521 135.704 26.881 1.00 51.27 C
ATOM 10 O3' G A 333 27.756 135.072 26.582 1.00 50.71 O
ATOM 11 C2' G A 333 25.893 135.175 28.166 1.00 52.82 C
ATOM 12 O2' G A 333 26.857 134.943 29.174 1.00 51.91 O
ATOM 13 C1' G A 333 25.054 136.378 28.611 1.00 54.44 C
ATOM 14 N9 G A 333 23.692 136.479 28.085 1.00 57.60 N
ATOM 15 C8 G A 333 23.155 137.543 27.395 1.00 57.65 C
ATOM 16 N7 G A 333 21.898 137.377 27.087 1.00 59.01 N
ATOM 17 C5 G A 333 21.584 136.123 27.594 1.00 60.78 C
ATOM 18 C6 G A 333 20.361 135.402 27.566 1.00 61.28 C
ATOM 19 O6 G A 333 19.277 135.741 27.075 1.00 62.77 O
ATOM 20 N1 G A 333 20.482 134.167 28.195 1.00 60.47 N
ATOM 21 C2 G A 333 21.629 133.686 28.775 1.00 59.59 C
ATOM 22 N2 G A 333 21.544 132.472 29.335 1.00 58.65 N
ATOM 23 N3 G A 333 22.775 134.345 28.806 1.00 59.64 N
ATOM 24 C4 G A 333 22.681 135.550 28.204 1.00 59.22 C
ATOM 25 P U A 334 27.795 133.834 25.568 1.00 54.67 P
ATOM 26 OP1 U A 334 29.121 133.171 25.699 1.00 54.88 O
ATOM 27 OP2 U A 334 27.348 134.312 24.234 1.00 53.80 O
ATOM 28 O5' U A 334 26.685 132.843 26.135 1.00 55.11 O
TER

ATOM 1 O3' A B 317 19.255 128.956 27.037 1.00 52.67 O
ATOM 2 P C B 318 20.097 128.582 28.357 1.00 51.85 P
ATOM 3 OP1 C B 318 20.125 129.827 29.165 1.00 50.19 O
ATOM 4 OP2 C B 318 21.380 127.927 27.958 1.00 47.44 O
ATOM 5 O5' C B 318 19.204 127.515 29.138 1.00 51.63 O
ATOM 6 C5' C B 318 17.934 127.877 29.722 1.00 49.56 C
ATOM 7 C4' C B 318 17.697 127.073 30.980 1.00 50.48 C
ATOM 8 O4' C B 318 16.366 127.361 31.494 1.00 51.47 O
ATOM 9 C3' C B 318 17.749 125.555 30.814 1.00 50.53 C
ATOM 10 O3' C B 318 18.174 124.979 32.049 1.00 52.12 O
ATOM 11 C2' C B 318 16.281 125.207 30.617 1.00 49.71 C
ATOM 12 O2' C B 318 15.959 123.883 30.966 1.00 49.38 O
ATOM 13 C1' C B 318 15.644 126.156 31.618 1.00 52.00 C
ATOM 14 N1 C B 318 14.209 126.417 31.441 1.00 56.29 N
ATOM 15 C2 C B 318 13.737 127.036 30.265 1.00 58.64 C
ATOM 16 O2 C B 318 14.545 127.344 29.369 1.00 60.69 O
ATOM 17 N3 C B 318 12.411 127.280 30.140 1.00 60.21 N
ATOM 18 C4 C B 318 11.571 126.934 31.123 1.00 61.37 C
ATOM 19 N4 C B 318 10.271 127.200 30.966 1.00 61.91 N
ATOM 20 C5 C B 318 12.025 126.301 32.315 1.00 60.46 C
ATOM 21 C6 C B 318 13.336 126.063 32.429 1.00 57.50 C
ATOM 22 P A B 319 19.650 124.360 32.197 1.00 53.53 P
ATOM 23 OP1 A B 319 20.262 124.200 30.863 1.00 54.38 O
ATOM 24 OP2 A B 319 19.560 123.183 33.092 1.00 55.32 O
ATOM 25 O5' A B 319 20.434 125.489 33.007 1.00 54.20 O
TER

Atoms:
OP1: (27.808,140.905,25.371)
OP2: (25.296,140.876,24.824)
C3': (26.521,135.704,26.881)
C1': (25.054,136.378,28.611)
C5': (26.714,138.149,26.072)
O6: (19.277,135.741,27.075)
O4': (25.758,137.528,28.203)
C8: (23.155,137.543,27.395)
C2: (21.629,133.686,28.775)
C6: (20.361,135.402,27.566)
C5: (21.584,136.123,27.594)
C4: (22.681,135.550,28.204)
P: (26.396,140.766,25.810)
C4': (26.759,137.164,27.214)
C2': (25.893,135.175,28.166)
O2': (26.857,134.943,29.174)
N1: (20.482,134.167,28.195)
N2: (21.544,132.472,29.335)
N3: (22.775,134.345,28.806)
N7: (21.898,137.377,27.087)
N9: (23.692,136.479,28.085)
O5': (26.222,139.390,26.574)
O3': (27.756,135.072,26.582)
C2: (13.737,127.036,30.265)
OP1: (20.125,129.827,29.165)
OP2: (21.380,127.927,27.958)
C4: (11.571,126.934,31.123)
O5': (19.204,127.515,29.138)
C3': (17.749,125.555,30.814)
C1': (15.644,126.156,31.618)
O4': (16.366,127.361,31.494)
C5': (17.934,127.877,29.722)
P: (20.097,128.582,28.357)
O2: (14.545,127.344,29.369)
C4': (17.697,127.073,30.980)
C2': (16.281,125.207,30.617)
O2': (15.959,123.883,30.966)
N1: (14.209,126.417,31.441)
N3: (12.411,127.280,30.140)
N4: (10.271,127.200,30.966)
C6: (13.336,126.063,32.429)
C5: (12.025,126.301,32.315)
O3': (18.174,124.979,32.049)
Image (generated by PyMOL):
PyMOL image
show in jmol