Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01018:02017
Extra
PDB:
ATOM 1 O3' A A1017 54.553 98.972 110.008 1.00 42.81 O
ATOM 2 P G A1018 53.278 98.093 110.454 1.00 43.85 P
ATOM 3 OP1 G A1018 52.815 98.578 111.793 1.00 39.22 O
ATOM 4 OP2 G A1018 53.598 96.651 110.262 1.00 42.30 O
ATOM 5 O5' G A1018 52.176 98.482 109.373 1.00 42.65 O
ATOM 6 C5' G A1018 51.688 99.825 109.276 1.00 40.64 C
ATOM 7 C4' G A1018 51.794 100.313 107.853 1.00 39.37 C
ATOM 8 O4' G A1018 51.192 101.635 107.764 1.00 38.55 O
ATOM 9 C3' G A1018 53.214 100.466 107.318 1.00 38.90 C
ATOM 10 O3' G A1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 11 C2' G A1018 53.514 101.927 107.631 1.00 39.03 C
ATOM 12 O2' G A1018 54.523 102.462 106.802 1.00 41.38 O
ATOM 13 C1' G A1018 52.160 102.562 107.324 1.00 37.73 C
ATOM 14 N9 G A1018 51.861 103.862 107.919 1.00 35.97 N
ATOM 15 C8 G A1018 52.531 104.522 108.919 1.00 35.48 C
ATOM 16 N7 G A1018 52.008 105.684 109.205 1.00 34.52 N
ATOM 17 C5 G A1018 50.927 105.794 108.347 1.00 35.05 C
ATOM 18 C6 G A1018 49.983 106.839 108.182 1.00 36.11 C
ATOM 19 O6 G A1018 49.899 107.911 108.796 1.00 36.61 O
ATOM 20 N1 G A1018 49.064 106.541 107.179 1.00 37.14 N
ATOM 21 C2 G A1018 49.050 105.389 106.431 1.00 37.06 C
ATOM 22 N2 G A1018 48.091 105.293 105.499 1.00 38.95 N
ATOM 23 N3 G A1018 49.914 104.407 106.582 1.00 36.87 N
ATOM 24 C4 G A1018 50.821 104.676 107.549 1.00 36.51 C
ATOM 25 P C A1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 26 OP1 C A1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 27 OP2 C A1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 28 O5' C A1019 55.476 99.515 105.208 1.00 41.41 O
TER
ATOM 1 O3' G B2016 43.859 108.487 103.870 1.00 31.74 O
ATOM 2 P C B2017 45.124 107.500 103.720 1.00 32.75 P
ATOM 3 OP1 C B2017 44.703 106.417 102.804 1.00 29.74 O
ATOM 4 OP2 C B2017 45.652 107.147 105.072 1.00 34.09 O
ATOM 5 O5' C B2017 46.220 108.396 102.991 1.00 31.79 O
ATOM 6 C5' C B2017 47.610 108.062 103.072 1.00 32.18 C
ATOM 7 C4' C B2017 48.422 108.945 102.153 1.00 35.71 C
ATOM 8 O4' C B2017 48.212 108.586 100.772 1.00 36.28 O
ATOM 9 C3' C B2017 48.086 110.427 102.149 1.00 37.00 C
ATOM 10 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 11 C2' C B2017 48.758 110.901 100.858 1.00 36.92 C
ATOM 12 O2' C B2017 50.121 111.201 101.071 1.00 38.90 O
ATOM 13 C1' C B2017 48.694 109.646 99.976 1.00 36.92 C
ATOM 14 N1 C B2017 47.939 109.707 98.710 1.00 36.99 N
ATOM 15 C2 C B2017 48.636 109.493 97.509 1.00 37.79 C
ATOM 16 O2 C B2017 49.859 109.310 97.551 1.00 37.90 O
ATOM 17 N3 C B2017 47.958 109.495 96.335 1.00 36.74 N
ATOM 18 C4 C B2017 46.642 109.713 96.330 1.00 36.30 C
ATOM 19 N4 C B2017 46.009 109.689 95.155 1.00 35.27 N
ATOM 20 C5 C B2017 45.913 109.961 97.533 1.00 35.43 C
ATOM 21 C6 C B2017 46.594 109.949 98.689 1.00 36.08 C
ATOM 22 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 23 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 24 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 25 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
TER
ATOM 2 P G A1018 53.278 98.093 110.454 1.00 43.85 P
ATOM 3 OP1 G A1018 52.815 98.578 111.793 1.00 39.22 O
ATOM 4 OP2 G A1018 53.598 96.651 110.262 1.00 42.30 O
ATOM 5 O5' G A1018 52.176 98.482 109.373 1.00 42.65 O
ATOM 6 C5' G A1018 51.688 99.825 109.276 1.00 40.64 C
ATOM 7 C4' G A1018 51.794 100.313 107.853 1.00 39.37 C
ATOM 8 O4' G A1018 51.192 101.635 107.764 1.00 38.55 O
ATOM 9 C3' G A1018 53.214 100.466 107.318 1.00 38.90 C
ATOM 10 O3' G A1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 11 C2' G A1018 53.514 101.927 107.631 1.00 39.03 C
ATOM 12 O2' G A1018 54.523 102.462 106.802 1.00 41.38 O
ATOM 13 C1' G A1018 52.160 102.562 107.324 1.00 37.73 C
ATOM 14 N9 G A1018 51.861 103.862 107.919 1.00 35.97 N
ATOM 15 C8 G A1018 52.531 104.522 108.919 1.00 35.48 C
ATOM 16 N7 G A1018 52.008 105.684 109.205 1.00 34.52 N
ATOM 17 C5 G A1018 50.927 105.794 108.347 1.00 35.05 C
ATOM 18 C6 G A1018 49.983 106.839 108.182 1.00 36.11 C
ATOM 19 O6 G A1018 49.899 107.911 108.796 1.00 36.61 O
ATOM 20 N1 G A1018 49.064 106.541 107.179 1.00 37.14 N
ATOM 21 C2 G A1018 49.050 105.389 106.431 1.00 37.06 C
ATOM 22 N2 G A1018 48.091 105.293 105.499 1.00 38.95 N
ATOM 23 N3 G A1018 49.914 104.407 106.582 1.00 36.87 N
ATOM 24 C4 G A1018 50.821 104.676 107.549 1.00 36.51 C
ATOM 25 P C A1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 26 OP1 C A1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 27 OP2 C A1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 28 O5' C A1019 55.476 99.515 105.208 1.00 41.41 O
TER
ATOM 1 O3' G B2016 43.859 108.487 103.870 1.00 31.74 O
ATOM 2 P C B2017 45.124 107.500 103.720 1.00 32.75 P
ATOM 3 OP1 C B2017 44.703 106.417 102.804 1.00 29.74 O
ATOM 4 OP2 C B2017 45.652 107.147 105.072 1.00 34.09 O
ATOM 5 O5' C B2017 46.220 108.396 102.991 1.00 31.79 O
ATOM 6 C5' C B2017 47.610 108.062 103.072 1.00 32.18 C
ATOM 7 C4' C B2017 48.422 108.945 102.153 1.00 35.71 C
ATOM 8 O4' C B2017 48.212 108.586 100.772 1.00 36.28 O
ATOM 9 C3' C B2017 48.086 110.427 102.149 1.00 37.00 C
ATOM 10 O3' C B2017 48.729 111.067 103.249 1.00 40.63 O
ATOM 11 C2' C B2017 48.758 110.901 100.858 1.00 36.92 C
ATOM 12 O2' C B2017 50.121 111.201 101.071 1.00 38.90 O
ATOM 13 C1' C B2017 48.694 109.646 99.976 1.00 36.92 C
ATOM 14 N1 C B2017 47.939 109.707 98.710 1.00 36.99 N
ATOM 15 C2 C B2017 48.636 109.493 97.509 1.00 37.79 C
ATOM 16 O2 C B2017 49.859 109.310 97.551 1.00 37.90 O
ATOM 17 N3 C B2017 47.958 109.495 96.335 1.00 36.74 N
ATOM 18 C4 C B2017 46.642 109.713 96.330 1.00 36.30 C
ATOM 19 N4 C B2017 46.009 109.689 95.155 1.00 35.27 N
ATOM 20 C5 C B2017 45.913 109.961 97.533 1.00 35.43 C
ATOM 21 C6 C B2017 46.594 109.949 98.689 1.00 36.08 C
ATOM 22 P G B2018 47.876 111.574 104.515 1.00 43.16 P
ATOM 23 OP1 G B2018 47.164 110.422 105.139 1.00 43.11 O
ATOM 24 OP2 G B2018 47.114 112.783 104.118 1.00 43.31 O
ATOM 25 O5' G B2018 49.011 112.079 105.500 1.00 42.20 O
TER
Atoms:
OP1: (52.815,98.578,111.793)
OP2: (53.598,96.651,110.262)
C3': (53.214,100.466,107.318)
C1': (52.160,102.562,107.324)
C5': (51.688,99.825,109.276)
O6: (49.899,107.911,108.796)
O4': (51.192,101.635,107.764)
C8: (52.531,104.522,108.919)
C2: (49.050,105.389,106.431)
C6: (49.983,106.839,108.182)
C5: (50.927,105.794,108.347)
C4: (50.821,104.676,107.549)
P: (53.278,98.093,110.454)
C4': (51.794,100.313,107.853)
C2': (53.514,101.927,107.631)
O2': (54.523,102.462,106.802)
N1: (49.064,106.541,107.179)
N2: (48.091,105.293,105.499)
N3: (49.914,104.407,106.582)
N7: (52.008,105.684,109.205)
N9: (51.861,103.862,107.919)
O5': (52.176,98.482,109.373)
O3': (53.183,100.286,105.906)
OP2: (53.598,96.651,110.262)
C3': (53.214,100.466,107.318)
C1': (52.160,102.562,107.324)
C5': (51.688,99.825,109.276)
O6: (49.899,107.911,108.796)
O4': (51.192,101.635,107.764)
C8: (52.531,104.522,108.919)
C2: (49.050,105.389,106.431)
C6: (49.983,106.839,108.182)
C5: (50.927,105.794,108.347)
C4: (50.821,104.676,107.549)
P: (53.278,98.093,110.454)
C4': (51.794,100.313,107.853)
C2': (53.514,101.927,107.631)
O2': (54.523,102.462,106.802)
N1: (49.064,106.541,107.179)
N2: (48.091,105.293,105.499)
N3: (49.914,104.407,106.582)
N7: (52.008,105.684,109.205)
N9: (51.861,103.862,107.919)
O5': (52.176,98.482,109.373)
O3': (53.183,100.286,105.906)
C2: (48.636,109.493,97.509)
OP1: (44.703,106.417,102.804)
OP2: (45.652,107.147,105.072)
C4: (46.642,109.713,96.330)
O5': (46.220,108.396,102.991)
C3': (48.086,110.427,102.149)
C1': (48.694,109.646,99.976)
O4': (48.212,108.586,100.772)
C5': (47.610,108.062,103.072)
P: (45.124,107.500,103.720)
O2: (49.859,109.310,97.551)
C4': (48.422,108.945,102.153)
C2': (48.758,110.901,100.858)
O2': (50.121,111.201,101.071)
N1: (47.939,109.707,98.710)
N3: (47.958,109.495,96.335)
N4: (46.009,109.689,95.155)
C6: (46.594,109.949,98.689)
C5: (45.913,109.961,97.533)
O3': (48.729,111.067,103.249)
OP1: (44.703,106.417,102.804)
OP2: (45.652,107.147,105.072)
C4: (46.642,109.713,96.330)
O5': (46.220,108.396,102.991)
C3': (48.086,110.427,102.149)
C1': (48.694,109.646,99.976)
O4': (48.212,108.586,100.772)
C5': (47.610,108.062,103.072)
P: (45.124,107.500,103.720)
O2: (49.859,109.310,97.551)
C4': (48.422,108.945,102.153)
C2': (48.758,110.901,100.858)
O2': (50.121,111.201,101.071)
N1: (47.939,109.707,98.710)
N3: (47.958,109.495,96.335)
N4: (46.009,109.689,95.155)
C6: (46.594,109.949,98.689)
C5: (45.913,109.961,97.533)
O3': (48.729,111.067,103.249)
Image (generated by PyMOL):