Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02065:02064
Extra
PDB:
ATOM 1 O3' A A2064 90.853 99.110 73.761 1.00 37.18 O
ATOM 2 P C A2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 3 OP1 C A2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 4 OP2 C A2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 5 O5' C A2065 89.921 99.070 71.449 1.00 38.75 O
ATOM 6 C5' C A2065 88.938 98.028 71.544 1.00 37.25 C
ATOM 7 C4' C A2065 87.845 98.256 70.545 1.00 34.86 C
ATOM 8 O4' C A2065 87.046 99.379 70.964 1.00 36.46 O
ATOM 9 C3' C A2065 88.324 98.639 69.165 1.00 34.90 C
ATOM 10 O3' C A2065 88.678 97.485 68.423 1.00 37.39 O
ATOM 11 C2' C A2065 87.112 99.354 68.601 1.00 35.54 C
ATOM 12 O2' C A2065 86.098 98.465 68.205 1.00 37.81 O
ATOM 13 C1' C A2065 86.615 100.104 69.831 1.00 34.86 C
ATOM 14 N1 C A2065 87.157 101.462 69.922 1.00 34.90 N
ATOM 15 C2 C A2065 86.526 102.486 69.223 1.00 36.54 C
ATOM 16 O2 C A2065 85.518 102.223 68.547 1.00 36.41 O
ATOM 17 N3 C A2065 87.025 103.738 69.300 1.00 36.03 N
ATOM 18 C4 C A2065 88.104 103.980 70.043 1.00 35.34 C
ATOM 19 N4 C A2065 88.558 105.228 70.099 1.00 36.65 N
ATOM 20 C5 C A2065 88.763 102.955 70.762 1.00 35.85 C
ATOM 21 C6 C A2065 88.264 101.723 70.675 1.00 36.03 C
ATOM 22 P U A2066 89.750 97.603 67.233 1.00 37.26 P
ATOM 23 OP1 U A2066 89.840 96.267 66.586 1.00 36.41 O
ATOM 24 OP2 U A2066 90.978 98.260 67.738 1.00 39.17 O
ATOM 25 O5' U A2066 89.049 98.591 66.214 1.00 36.24 O
TER
ATOM 1 O3' U B2063 94.926 102.210 75.061 1.00 51.57 O
ATOM 2 P A B2064 93.650 103.139 75.338 1.00 48.91 P
ATOM 3 OP1 A B2064 93.639 104.205 74.306 1.00 46.88 O
ATOM 4 OP2 A B2064 93.658 103.505 76.783 1.00 47.08 O
ATOM 5 O5' A B2064 92.415 102.177 75.075 1.00 45.80 O
ATOM 6 C5' A B2064 92.136 101.065 75.946 1.00 42.08 C
ATOM 7 C4' A B2064 90.731 100.573 75.703 1.00 40.01 C
ATOM 8 O4' A B2064 89.790 101.587 76.143 1.00 39.92 O
ATOM 9 C3' A B2064 90.412 100.375 74.232 1.00 39.64 C
ATOM 10 O3' A B2064 90.853 99.110 73.761 1.00 37.18 O
ATOM 11 C2' A B2064 88.904 100.560 74.184 1.00 40.22 C
ATOM 12 O2' A B2064 88.209 99.400 74.591 1.00 43.52 O
ATOM 13 C1' A B2064 88.703 101.657 75.235 1.00 40.43 C
ATOM 14 N9 A B2064 88.595 103.035 74.733 1.00 40.56 N
ATOM 15 C8 A B2064 89.409 104.103 75.024 1.00 40.07 C
ATOM 16 N7 A B2064 89.026 105.228 74.471 1.00 39.73 N
ATOM 17 C5 A B2064 87.895 104.877 73.748 1.00 39.37 C
ATOM 18 C6 A B2064 87.019 105.625 72.941 1.00 39.64 C
ATOM 19 N6 A B2064 87.166 106.928 72.692 1.00 39.34 N
ATOM 20 N1 A B2064 85.974 104.979 72.386 1.00 40.16 N
ATOM 21 C2 A B2064 85.836 103.671 72.619 1.00 39.98 C
ATOM 22 N3 A B2064 86.597 102.858 73.345 1.00 38.97 N
ATOM 23 C4 A B2064 87.621 103.530 73.893 1.00 39.65 C
ATOM 24 P C B2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 25 OP1 C B2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 26 OP2 C B2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 27 O5' C B2065 89.921 99.070 71.449 1.00 38.75 O
TER
ATOM 2 P C A2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 3 OP1 C A2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 4 OP2 C A2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 5 O5' C A2065 89.921 99.070 71.449 1.00 38.75 O
ATOM 6 C5' C A2065 88.938 98.028 71.544 1.00 37.25 C
ATOM 7 C4' C A2065 87.845 98.256 70.545 1.00 34.86 C
ATOM 8 O4' C A2065 87.046 99.379 70.964 1.00 36.46 O
ATOM 9 C3' C A2065 88.324 98.639 69.165 1.00 34.90 C
ATOM 10 O3' C A2065 88.678 97.485 68.423 1.00 37.39 O
ATOM 11 C2' C A2065 87.112 99.354 68.601 1.00 35.54 C
ATOM 12 O2' C A2065 86.098 98.465 68.205 1.00 37.81 O
ATOM 13 C1' C A2065 86.615 100.104 69.831 1.00 34.86 C
ATOM 14 N1 C A2065 87.157 101.462 69.922 1.00 34.90 N
ATOM 15 C2 C A2065 86.526 102.486 69.223 1.00 36.54 C
ATOM 16 O2 C A2065 85.518 102.223 68.547 1.00 36.41 O
ATOM 17 N3 C A2065 87.025 103.738 69.300 1.00 36.03 N
ATOM 18 C4 C A2065 88.104 103.980 70.043 1.00 35.34 C
ATOM 19 N4 C A2065 88.558 105.228 70.099 1.00 36.65 N
ATOM 20 C5 C A2065 88.763 102.955 70.762 1.00 35.85 C
ATOM 21 C6 C A2065 88.264 101.723 70.675 1.00 36.03 C
ATOM 22 P U A2066 89.750 97.603 67.233 1.00 37.26 P
ATOM 23 OP1 U A2066 89.840 96.267 66.586 1.00 36.41 O
ATOM 24 OP2 U A2066 90.978 98.260 67.738 1.00 39.17 O
ATOM 25 O5' U A2066 89.049 98.591 66.214 1.00 36.24 O
TER
ATOM 1 O3' U B2063 94.926 102.210 75.061 1.00 51.57 O
ATOM 2 P A B2064 93.650 103.139 75.338 1.00 48.91 P
ATOM 3 OP1 A B2064 93.639 104.205 74.306 1.00 46.88 O
ATOM 4 OP2 A B2064 93.658 103.505 76.783 1.00 47.08 O
ATOM 5 O5' A B2064 92.415 102.177 75.075 1.00 45.80 O
ATOM 6 C5' A B2064 92.136 101.065 75.946 1.00 42.08 C
ATOM 7 C4' A B2064 90.731 100.573 75.703 1.00 40.01 C
ATOM 8 O4' A B2064 89.790 101.587 76.143 1.00 39.92 O
ATOM 9 C3' A B2064 90.412 100.375 74.232 1.00 39.64 C
ATOM 10 O3' A B2064 90.853 99.110 73.761 1.00 37.18 O
ATOM 11 C2' A B2064 88.904 100.560 74.184 1.00 40.22 C
ATOM 12 O2' A B2064 88.209 99.400 74.591 1.00 43.52 O
ATOM 13 C1' A B2064 88.703 101.657 75.235 1.00 40.43 C
ATOM 14 N9 A B2064 88.595 103.035 74.733 1.00 40.56 N
ATOM 15 C8 A B2064 89.409 104.103 75.024 1.00 40.07 C
ATOM 16 N7 A B2064 89.026 105.228 74.471 1.00 39.73 N
ATOM 17 C5 A B2064 87.895 104.877 73.748 1.00 39.37 C
ATOM 18 C6 A B2064 87.019 105.625 72.941 1.00 39.64 C
ATOM 19 N6 A B2064 87.166 106.928 72.692 1.00 39.34 N
ATOM 20 N1 A B2064 85.974 104.979 72.386 1.00 40.16 N
ATOM 21 C2 A B2064 85.836 103.671 72.619 1.00 39.98 C
ATOM 22 N3 A B2064 86.597 102.858 73.345 1.00 38.97 N
ATOM 23 C4 A B2064 87.621 103.530 73.893 1.00 39.65 C
ATOM 24 P C B2065 91.300 98.952 72.232 1.00 40.17 P
ATOM 25 OP1 C B2065 91.830 97.580 72.044 1.00 40.77 O
ATOM 26 OP2 C B2065 92.144 100.108 71.852 1.00 40.78 O
ATOM 27 O5' C B2065 89.921 99.070 71.449 1.00 38.75 O
TER
Atoms:
C2: (86.526,102.486,69.223)
OP1: (91.830,97.580,72.044)
OP2: (92.144,100.108,71.852)
C4: (88.104,103.980,70.043)
O5': (89.921,99.070,71.449)
C3': (88.324,98.639,69.165)
C1': (86.615,100.104,69.831)
O4': (87.046,99.379,70.964)
C5': (88.938,98.028,71.544)
P: (91.300,98.952,72.232)
O2: (85.518,102.223,68.547)
C4': (87.845,98.256,70.545)
C2': (87.112,99.354,68.601)
O2': (86.098,98.465,68.205)
N1: (87.157,101.462,69.922)
N3: (87.025,103.738,69.300)
N4: (88.558,105.228,70.099)
C6: (88.264,101.723,70.675)
C5: (88.763,102.955,70.762)
O3': (88.678,97.485,68.423)
OP1: (91.830,97.580,72.044)
OP2: (92.144,100.108,71.852)
C4: (88.104,103.980,70.043)
O5': (89.921,99.070,71.449)
C3': (88.324,98.639,69.165)
C1': (86.615,100.104,69.831)
O4': (87.046,99.379,70.964)
C5': (88.938,98.028,71.544)
P: (91.300,98.952,72.232)
O2: (85.518,102.223,68.547)
C4': (87.845,98.256,70.545)
C2': (87.112,99.354,68.601)
O2': (86.098,98.465,68.205)
N1: (87.157,101.462,69.922)
N3: (87.025,103.738,69.300)
N4: (88.558,105.228,70.099)
C6: (88.264,101.723,70.675)
C5: (88.763,102.955,70.762)
O3': (88.678,97.485,68.423)
OP1: (93.639,104.205,74.306)
OP2: (93.658,103.505,76.783)
C3': (90.412,100.375,74.232)
C1': (88.703,101.657,75.235)
C5': (92.136,101.065,75.946)
O4': (89.790,101.587,76.143)
C8: (89.409,104.103,75.024)
O2': (88.209,99.400,74.591)
C6: (87.019,105.625,72.941)
C5: (87.895,104.877,73.748)
C4: (87.621,103.530,73.893)
P: (93.650,103.139,75.338)
C4': (90.731,100.573,75.703)
C2': (88.904,100.560,74.184)
C2: (85.836,103.671,72.619)
N1: (85.974,104.979,72.386)
N3: (86.597,102.858,73.345)
N6: (87.166,106.928,72.692)
N7: (89.026,105.228,74.471)
N9: (88.595,103.035,74.733)
O5': (92.415,102.177,75.075)
O3': (90.853,99.110,73.761)
OP2: (93.658,103.505,76.783)
C3': (90.412,100.375,74.232)
C1': (88.703,101.657,75.235)
C5': (92.136,101.065,75.946)
O4': (89.790,101.587,76.143)
C8: (89.409,104.103,75.024)
O2': (88.209,99.400,74.591)
C6: (87.019,105.625,72.941)
C5: (87.895,104.877,73.748)
C4: (87.621,103.530,73.893)
P: (93.650,103.139,75.338)
C4': (90.731,100.573,75.703)
C2': (88.904,100.560,74.184)
C2: (85.836,103.671,72.619)
N1: (85.974,104.979,72.386)
N3: (86.597,102.858,73.345)
N6: (87.166,106.928,72.692)
N7: (89.026,105.228,74.471)
N9: (88.595,103.035,74.733)
O5': (92.415,102.177,75.075)
O3': (90.853,99.110,73.761)
Image (generated by PyMOL):