Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01018:02017
Extra
PDB:
ATOM 1 O3' A A1017 54.529 98.889 110.050 1.00 45.74 O
ATOM 2 P G A1018 53.256 98.008 110.490 1.00 47.57 P
ATOM 3 OP1 G A1018 52.765 98.531 111.801 1.00 43.82 O
ATOM 4 OP2 G A1018 53.603 96.570 110.348 1.00 48.84 O
ATOM 5 O5' G A1018 52.174 98.344 109.376 1.00 44.78 O
ATOM 6 C5' G A1018 51.672 99.673 109.247 1.00 42.59 C
ATOM 7 C4' G A1018 51.817 100.146 107.828 1.00 40.06 C
ATOM 8 O4' G A1018 51.238 101.473 107.739 1.00 38.91 O
ATOM 9 C3' G A1018 53.243 100.272 107.304 1.00 38.37 C
ATOM 10 O3' G A1018 53.203 100.094 105.891 1.00 39.42 O
ATOM 11 C2' G A1018 53.563 101.730 107.610 1.00 38.72 C
ATOM 12 O2' G A1018 54.562 102.240 106.757 1.00 38.84 O
ATOM 13 C1' G A1018 52.217 102.384 107.302 1.00 39.21 C
ATOM 14 N9 G A1018 51.914 103.689 107.883 1.00 39.47 N
ATOM 15 C8 G A1018 52.581 104.367 108.875 1.00 40.25 C
ATOM 16 N7 G A1018 52.043 105.525 109.155 1.00 40.00 N
ATOM 17 C5 G A1018 50.956 105.614 108.300 1.00 40.52 C
ATOM 18 C6 G A1018 49.995 106.642 108.137 1.00 41.04 C
ATOM 19 O6 G A1018 49.899 107.713 108.743 1.00 41.80 O
ATOM 20 N1 G A1018 49.071 106.324 107.149 1.00 41.90 N
ATOM 21 C2 G A1018 49.064 105.162 106.417 1.00 42.34 C
ATOM 22 N2 G A1018 48.083 105.033 105.516 1.00 44.44 N
ATOM 23 N3 G A1018 49.950 104.197 106.560 1.00 41.51 N
ATOM 24 C4 G A1018 50.863 104.488 107.511 1.00 40.90 C
ATOM 25 P C A1019 53.972 98.863 105.203 1.00 42.51 P
ATOM 26 OP1 C A1019 53.473 98.744 103.809 1.00 43.61 O
ATOM 27 OP2 C A1019 53.899 97.681 106.099 1.00 43.06 O
ATOM 28 O5' C A1019 55.478 99.367 105.098 1.00 40.89 O
TER
ATOM 1 O3' G B2016 43.946 108.424 103.813 1.00 33.39 O
ATOM 2 P C B2017 45.245 107.481 103.664 1.00 35.09 P
ATOM 3 OP1 C B2017 44.869 106.382 102.750 1.00 34.21 O
ATOM 4 OP2 C B2017 45.749 107.160 105.027 1.00 33.85 O
ATOM 5 O5' C B2017 46.307 108.398 102.910 1.00 34.95 O
ATOM 6 C5' C B2017 47.721 108.180 103.061 1.00 36.05 C
ATOM 7 C4' C B2017 48.506 109.068 102.111 1.00 38.95 C
ATOM 8 O4' C B2017 48.304 108.652 100.742 1.00 39.35 O
ATOM 9 C3' C B2017 48.121 110.540 102.038 1.00 40.11 C
ATOM 10 O3' C B2017 48.749 111.280 103.081 1.00 42.26 O
ATOM 11 C2' C B2017 48.793 110.976 100.734 1.00 39.59 C
ATOM 12 O2' C B2017 50.150 111.296 100.956 1.00 41.80 O
ATOM 13 C1' C B2017 48.759 109.691 99.902 1.00 38.16 C
ATOM 14 N1 C B2017 47.988 109.701 98.646 1.00 36.42 N
ATOM 15 C2 C B2017 48.667 109.450 97.454 1.00 36.11 C
ATOM 16 O2 C B2017 49.882 109.272 97.492 1.00 35.88 O
ATOM 17 N3 C B2017 47.982 109.411 96.288 1.00 36.30 N
ATOM 18 C4 C B2017 46.668 109.623 96.284 1.00 36.28 C
ATOM 19 N4 C B2017 46.031 109.565 95.115 1.00 33.29 N
ATOM 20 C5 C B2017 45.948 109.904 97.483 1.00 37.24 C
ATOM 21 C6 C B2017 46.642 109.934 98.633 1.00 37.77 C
ATOM 22 P G B2018 47.969 111.602 104.450 1.00 44.68 P
ATOM 23 OP1 G B2018 46.840 110.648 104.677 1.00 43.88 O
ATOM 24 OP2 G B2018 47.718 113.066 104.481 1.00 42.48 O
ATOM 25 O5' G B2018 49.084 111.268 105.524 1.00 41.04 O
TER
ATOM 2 P G A1018 53.256 98.008 110.490 1.00 47.57 P
ATOM 3 OP1 G A1018 52.765 98.531 111.801 1.00 43.82 O
ATOM 4 OP2 G A1018 53.603 96.570 110.348 1.00 48.84 O
ATOM 5 O5' G A1018 52.174 98.344 109.376 1.00 44.78 O
ATOM 6 C5' G A1018 51.672 99.673 109.247 1.00 42.59 C
ATOM 7 C4' G A1018 51.817 100.146 107.828 1.00 40.06 C
ATOM 8 O4' G A1018 51.238 101.473 107.739 1.00 38.91 O
ATOM 9 C3' G A1018 53.243 100.272 107.304 1.00 38.37 C
ATOM 10 O3' G A1018 53.203 100.094 105.891 1.00 39.42 O
ATOM 11 C2' G A1018 53.563 101.730 107.610 1.00 38.72 C
ATOM 12 O2' G A1018 54.562 102.240 106.757 1.00 38.84 O
ATOM 13 C1' G A1018 52.217 102.384 107.302 1.00 39.21 C
ATOM 14 N9 G A1018 51.914 103.689 107.883 1.00 39.47 N
ATOM 15 C8 G A1018 52.581 104.367 108.875 1.00 40.25 C
ATOM 16 N7 G A1018 52.043 105.525 109.155 1.00 40.00 N
ATOM 17 C5 G A1018 50.956 105.614 108.300 1.00 40.52 C
ATOM 18 C6 G A1018 49.995 106.642 108.137 1.00 41.04 C
ATOM 19 O6 G A1018 49.899 107.713 108.743 1.00 41.80 O
ATOM 20 N1 G A1018 49.071 106.324 107.149 1.00 41.90 N
ATOM 21 C2 G A1018 49.064 105.162 106.417 1.00 42.34 C
ATOM 22 N2 G A1018 48.083 105.033 105.516 1.00 44.44 N
ATOM 23 N3 G A1018 49.950 104.197 106.560 1.00 41.51 N
ATOM 24 C4 G A1018 50.863 104.488 107.511 1.00 40.90 C
ATOM 25 P C A1019 53.972 98.863 105.203 1.00 42.51 P
ATOM 26 OP1 C A1019 53.473 98.744 103.809 1.00 43.61 O
ATOM 27 OP2 C A1019 53.899 97.681 106.099 1.00 43.06 O
ATOM 28 O5' C A1019 55.478 99.367 105.098 1.00 40.89 O
TER
ATOM 1 O3' G B2016 43.946 108.424 103.813 1.00 33.39 O
ATOM 2 P C B2017 45.245 107.481 103.664 1.00 35.09 P
ATOM 3 OP1 C B2017 44.869 106.382 102.750 1.00 34.21 O
ATOM 4 OP2 C B2017 45.749 107.160 105.027 1.00 33.85 O
ATOM 5 O5' C B2017 46.307 108.398 102.910 1.00 34.95 O
ATOM 6 C5' C B2017 47.721 108.180 103.061 1.00 36.05 C
ATOM 7 C4' C B2017 48.506 109.068 102.111 1.00 38.95 C
ATOM 8 O4' C B2017 48.304 108.652 100.742 1.00 39.35 O
ATOM 9 C3' C B2017 48.121 110.540 102.038 1.00 40.11 C
ATOM 10 O3' C B2017 48.749 111.280 103.081 1.00 42.26 O
ATOM 11 C2' C B2017 48.793 110.976 100.734 1.00 39.59 C
ATOM 12 O2' C B2017 50.150 111.296 100.956 1.00 41.80 O
ATOM 13 C1' C B2017 48.759 109.691 99.902 1.00 38.16 C
ATOM 14 N1 C B2017 47.988 109.701 98.646 1.00 36.42 N
ATOM 15 C2 C B2017 48.667 109.450 97.454 1.00 36.11 C
ATOM 16 O2 C B2017 49.882 109.272 97.492 1.00 35.88 O
ATOM 17 N3 C B2017 47.982 109.411 96.288 1.00 36.30 N
ATOM 18 C4 C B2017 46.668 109.623 96.284 1.00 36.28 C
ATOM 19 N4 C B2017 46.031 109.565 95.115 1.00 33.29 N
ATOM 20 C5 C B2017 45.948 109.904 97.483 1.00 37.24 C
ATOM 21 C6 C B2017 46.642 109.934 98.633 1.00 37.77 C
ATOM 22 P G B2018 47.969 111.602 104.450 1.00 44.68 P
ATOM 23 OP1 G B2018 46.840 110.648 104.677 1.00 43.88 O
ATOM 24 OP2 G B2018 47.718 113.066 104.481 1.00 42.48 O
ATOM 25 O5' G B2018 49.084 111.268 105.524 1.00 41.04 O
TER
Atoms:
OP1: (52.765,98.531,111.801)
OP2: (53.603,96.570,110.348)
C3': (53.243,100.272,107.304)
C1': (52.217,102.384,107.302)
C5': (51.672,99.673,109.247)
O6: (49.899,107.713,108.743)
O4': (51.238,101.473,107.739)
C8: (52.581,104.367,108.875)
C2: (49.064,105.162,106.417)
C6: (49.995,106.642,108.137)
C5: (50.956,105.614,108.300)
C4: (50.863,104.488,107.511)
P: (53.256,98.008,110.490)
C4': (51.817,100.146,107.828)
C2': (53.563,101.730,107.610)
O2': (54.562,102.240,106.757)
N1: (49.071,106.324,107.149)
N2: (48.083,105.033,105.516)
N3: (49.950,104.197,106.560)
N7: (52.043,105.525,109.155)
N9: (51.914,103.689,107.883)
O5': (52.174,98.344,109.376)
O3': (53.203,100.094,105.891)
OP2: (53.603,96.570,110.348)
C3': (53.243,100.272,107.304)
C1': (52.217,102.384,107.302)
C5': (51.672,99.673,109.247)
O6: (49.899,107.713,108.743)
O4': (51.238,101.473,107.739)
C8: (52.581,104.367,108.875)
C2: (49.064,105.162,106.417)
C6: (49.995,106.642,108.137)
C5: (50.956,105.614,108.300)
C4: (50.863,104.488,107.511)
P: (53.256,98.008,110.490)
C4': (51.817,100.146,107.828)
C2': (53.563,101.730,107.610)
O2': (54.562,102.240,106.757)
N1: (49.071,106.324,107.149)
N2: (48.083,105.033,105.516)
N3: (49.950,104.197,106.560)
N7: (52.043,105.525,109.155)
N9: (51.914,103.689,107.883)
O5': (52.174,98.344,109.376)
O3': (53.203,100.094,105.891)
C2: (48.667,109.450,97.454)
OP1: (44.869,106.382,102.750)
OP2: (45.749,107.160,105.027)
C4: (46.668,109.623,96.284)
O5': (46.307,108.398,102.910)
C3': (48.121,110.540,102.038)
C1': (48.759,109.691,99.902)
O4': (48.304,108.652,100.742)
C5': (47.721,108.180,103.061)
P: (45.245,107.481,103.664)
O2: (49.882,109.272,97.492)
C4': (48.506,109.068,102.111)
C2': (48.793,110.976,100.734)
O2': (50.150,111.296,100.956)
N1: (47.988,109.701,98.646)
N3: (47.982,109.411,96.288)
N4: (46.031,109.565,95.115)
C6: (46.642,109.934,98.633)
C5: (45.948,109.904,97.483)
O3': (48.749,111.280,103.081)
OP1: (44.869,106.382,102.750)
OP2: (45.749,107.160,105.027)
C4: (46.668,109.623,96.284)
O5': (46.307,108.398,102.910)
C3': (48.121,110.540,102.038)
C1': (48.759,109.691,99.902)
O4': (48.304,108.652,100.742)
C5': (47.721,108.180,103.061)
P: (45.245,107.481,103.664)
O2: (49.882,109.272,97.492)
C4': (48.506,109.068,102.111)
C2': (48.793,110.976,100.734)
O2': (50.150,111.296,100.956)
N1: (47.988,109.701,98.646)
N3: (47.982,109.411,96.288)
N4: (46.031,109.565,95.115)
C6: (46.642,109.934,98.633)
C5: (45.948,109.904,97.483)
O3': (48.749,111.280,103.081)
Image (generated by PyMOL):