Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0582:0581
Extra
PDB:
ATOM 1 O3' A A 581 0.332 106.251 97.673 1.00 39.84 O
ATOM 2 P C A 582 -0.745 107.112 96.840 1.00 40.74 P
ATOM 3 OP1 C A 582 -0.205 108.473 96.570 1.00 39.14 O
ATOM 4 OP2 C A 582 -2.051 106.980 97.533 1.00 42.05 O
ATOM 5 O5' C A 582 -0.849 106.331 95.457 1.00 37.88 O
ATOM 6 C5' C A 582 0.254 106.297 94.548 1.00 37.56 C
ATOM 7 C4' C A 582 -0.089 105.458 93.338 1.00 39.95 C
ATOM 8 O4' C A 582 -0.415 104.107 93.760 1.00 40.54 O
ATOM 9 C3' C A 582 -1.307 105.887 92.538 1.00 38.59 C
ATOM 10 O3' C A 582 -0.985 106.918 91.627 1.00 39.32 O
ATOM 11 C2' C A 582 -1.660 104.606 91.806 1.00 40.22 C
ATOM 12 O2' C A 582 -0.779 104.359 90.731 1.00 38.30 O
ATOM 13 C1' C A 582 -1.409 103.567 92.899 1.00 41.46 C
ATOM 14 N1 C A 582 -2.624 103.291 93.695 1.00 44.95 N
ATOM 15 C2 C A 582 -3.517 102.286 93.259 1.00 45.80 C
ATOM 16 O2 C A 582 -3.237 101.620 92.240 1.00 45.62 O
ATOM 17 N3 C A 582 -4.656 102.066 93.966 1.00 45.49 N
ATOM 18 C4 C A 582 -4.911 102.789 95.061 1.00 45.07 C
ATOM 19 N4 C A 582 -6.053 102.563 95.709 1.00 45.99 N
ATOM 20 C5 C A 582 -4.008 103.786 95.539 1.00 44.61 C
ATOM 21 C6 C A 582 -2.894 104.004 94.834 1.00 43.84 C
ATOM 22 P U A 583 -2.109 107.981 91.197 1.00 43.52 P
ATOM 23 OP1 U A 583 -1.510 108.844 90.133 1.00 41.84 O
ATOM 24 OP2 U A 583 -2.657 108.616 92.437 1.00 39.16 O
ATOM 25 O5' U A 583 -3.241 107.082 90.523 1.00 39.94 O
TER
ATOM 1 O3' G B 580 -2.139 102.436 101.548 1.00 45.42 O
ATOM 2 P A B 581 -2.775 103.859 101.154 1.00 47.51 P
ATOM 3 OP1 A B 581 -2.687 104.724 102.368 1.00 45.61 O
ATOM 4 OP2 A B 581 -4.082 103.698 100.461 1.00 46.25 O
ATOM 5 O5' A B 581 -1.734 104.403 100.078 1.00 47.70 O
ATOM 6 C5' A B 581 -0.383 104.763 100.453 1.00 44.86 C
ATOM 7 C4' A B 581 0.564 104.461 99.320 1.00 43.19 C
ATOM 8 O4' A B 581 0.748 103.027 99.224 1.00 43.78 O
ATOM 9 C3' A B 581 0.074 104.877 97.944 1.00 42.39 C
ATOM 10 O3' A B 581 0.332 106.251 97.673 1.00 39.84 O
ATOM 11 C2' A B 581 0.843 103.931 97.037 1.00 44.98 C
ATOM 12 O2' A B 581 2.184 104.342 96.855 1.00 47.27 O
ATOM 13 C1' A B 581 0.816 102.641 97.863 1.00 47.07 C
ATOM 14 N9 A B 581 -0.367 101.830 97.577 1.00 52.57 N
ATOM 15 C8 A B 581 -1.499 101.716 98.351 1.00 54.58 C
ATOM 16 N7 A B 581 -2.429 100.963 97.821 1.00 55.67 N
ATOM 17 C5 A B 581 -1.875 100.543 96.621 1.00 55.75 C
ATOM 18 C6 A B 581 -2.374 99.737 95.584 1.00 56.61 C
ATOM 19 N6 A B 581 -3.598 99.197 95.589 1.00 55.50 N
ATOM 20 N1 A B 581 -1.566 99.505 94.525 1.00 57.35 N
ATOM 21 C2 A B 581 -0.344 100.058 94.519 1.00 56.44 C
ATOM 22 N3 A B 581 0.234 100.839 95.429 1.00 56.74 N
ATOM 23 C4 A B 581 -0.596 101.050 96.467 1.00 54.90 C
ATOM 24 P C B 582 -0.745 107.112 96.840 1.00 40.74 P
ATOM 25 OP1 C B 582 -0.205 108.473 96.570 1.00 39.14 O
ATOM 26 OP2 C B 582 -2.051 106.980 97.533 1.00 42.05 O
ATOM 27 O5' C B 582 -0.849 106.331 95.457 1.00 37.88 O
TER
ATOM 2 P C A 582 -0.745 107.112 96.840 1.00 40.74 P
ATOM 3 OP1 C A 582 -0.205 108.473 96.570 1.00 39.14 O
ATOM 4 OP2 C A 582 -2.051 106.980 97.533 1.00 42.05 O
ATOM 5 O5' C A 582 -0.849 106.331 95.457 1.00 37.88 O
ATOM 6 C5' C A 582 0.254 106.297 94.548 1.00 37.56 C
ATOM 7 C4' C A 582 -0.089 105.458 93.338 1.00 39.95 C
ATOM 8 O4' C A 582 -0.415 104.107 93.760 1.00 40.54 O
ATOM 9 C3' C A 582 -1.307 105.887 92.538 1.00 38.59 C
ATOM 10 O3' C A 582 -0.985 106.918 91.627 1.00 39.32 O
ATOM 11 C2' C A 582 -1.660 104.606 91.806 1.00 40.22 C
ATOM 12 O2' C A 582 -0.779 104.359 90.731 1.00 38.30 O
ATOM 13 C1' C A 582 -1.409 103.567 92.899 1.00 41.46 C
ATOM 14 N1 C A 582 -2.624 103.291 93.695 1.00 44.95 N
ATOM 15 C2 C A 582 -3.517 102.286 93.259 1.00 45.80 C
ATOM 16 O2 C A 582 -3.237 101.620 92.240 1.00 45.62 O
ATOM 17 N3 C A 582 -4.656 102.066 93.966 1.00 45.49 N
ATOM 18 C4 C A 582 -4.911 102.789 95.061 1.00 45.07 C
ATOM 19 N4 C A 582 -6.053 102.563 95.709 1.00 45.99 N
ATOM 20 C5 C A 582 -4.008 103.786 95.539 1.00 44.61 C
ATOM 21 C6 C A 582 -2.894 104.004 94.834 1.00 43.84 C
ATOM 22 P U A 583 -2.109 107.981 91.197 1.00 43.52 P
ATOM 23 OP1 U A 583 -1.510 108.844 90.133 1.00 41.84 O
ATOM 24 OP2 U A 583 -2.657 108.616 92.437 1.00 39.16 O
ATOM 25 O5' U A 583 -3.241 107.082 90.523 1.00 39.94 O
TER
ATOM 1 O3' G B 580 -2.139 102.436 101.548 1.00 45.42 O
ATOM 2 P A B 581 -2.775 103.859 101.154 1.00 47.51 P
ATOM 3 OP1 A B 581 -2.687 104.724 102.368 1.00 45.61 O
ATOM 4 OP2 A B 581 -4.082 103.698 100.461 1.00 46.25 O
ATOM 5 O5' A B 581 -1.734 104.403 100.078 1.00 47.70 O
ATOM 6 C5' A B 581 -0.383 104.763 100.453 1.00 44.86 C
ATOM 7 C4' A B 581 0.564 104.461 99.320 1.00 43.19 C
ATOM 8 O4' A B 581 0.748 103.027 99.224 1.00 43.78 O
ATOM 9 C3' A B 581 0.074 104.877 97.944 1.00 42.39 C
ATOM 10 O3' A B 581 0.332 106.251 97.673 1.00 39.84 O
ATOM 11 C2' A B 581 0.843 103.931 97.037 1.00 44.98 C
ATOM 12 O2' A B 581 2.184 104.342 96.855 1.00 47.27 O
ATOM 13 C1' A B 581 0.816 102.641 97.863 1.00 47.07 C
ATOM 14 N9 A B 581 -0.367 101.830 97.577 1.00 52.57 N
ATOM 15 C8 A B 581 -1.499 101.716 98.351 1.00 54.58 C
ATOM 16 N7 A B 581 -2.429 100.963 97.821 1.00 55.67 N
ATOM 17 C5 A B 581 -1.875 100.543 96.621 1.00 55.75 C
ATOM 18 C6 A B 581 -2.374 99.737 95.584 1.00 56.61 C
ATOM 19 N6 A B 581 -3.598 99.197 95.589 1.00 55.50 N
ATOM 20 N1 A B 581 -1.566 99.505 94.525 1.00 57.35 N
ATOM 21 C2 A B 581 -0.344 100.058 94.519 1.00 56.44 C
ATOM 22 N3 A B 581 0.234 100.839 95.429 1.00 56.74 N
ATOM 23 C4 A B 581 -0.596 101.050 96.467 1.00 54.90 C
ATOM 24 P C B 582 -0.745 107.112 96.840 1.00 40.74 P
ATOM 25 OP1 C B 582 -0.205 108.473 96.570 1.00 39.14 O
ATOM 26 OP2 C B 582 -2.051 106.980 97.533 1.00 42.05 O
ATOM 27 O5' C B 582 -0.849 106.331 95.457 1.00 37.88 O
TER
Atoms:
C2: (-3.517,102.286,93.259)
OP1: (-0.205,108.473,96.570)
OP2: (-2.051,106.980,97.533)
C4: (-4.911,102.789,95.061)
O5': (-0.849,106.331,95.457)
C3': (-1.307,105.887,92.538)
C1': (-1.409,103.567,92.899)
O4': (-0.415,104.107,93.760)
C5': (0.254,106.297,94.548)
P: (-0.745,107.112,96.840)
O2: (-3.237,101.620,92.240)
C4': (-0.089,105.458,93.338)
C2': (-1.660,104.606,91.806)
O2': (-0.779,104.359,90.731)
N1: (-2.624,103.291,93.695)
N3: (-4.656,102.066,93.966)
N4: (-6.053,102.563,95.709)
C6: (-2.894,104.004,94.834)
C5: (-4.008,103.786,95.539)
O3': (-0.985,106.918,91.627)
OP1: (-0.205,108.473,96.570)
OP2: (-2.051,106.980,97.533)
C4: (-4.911,102.789,95.061)
O5': (-0.849,106.331,95.457)
C3': (-1.307,105.887,92.538)
C1': (-1.409,103.567,92.899)
O4': (-0.415,104.107,93.760)
C5': (0.254,106.297,94.548)
P: (-0.745,107.112,96.840)
O2: (-3.237,101.620,92.240)
C4': (-0.089,105.458,93.338)
C2': (-1.660,104.606,91.806)
O2': (-0.779,104.359,90.731)
N1: (-2.624,103.291,93.695)
N3: (-4.656,102.066,93.966)
N4: (-6.053,102.563,95.709)
C6: (-2.894,104.004,94.834)
C5: (-4.008,103.786,95.539)
O3': (-0.985,106.918,91.627)
OP1: (-2.687,104.724,102.368)
OP2: (-4.082,103.698,100.461)
C3': (0.074,104.877,97.944)
C1': (0.816,102.641,97.863)
C5': (-0.383,104.763,100.453)
O4': (0.748,103.027,99.224)
C8: (-1.499,101.716,98.351)
O2': (2.184,104.342,96.855)
C6: (-2.374,99.737,95.584)
C5: (-1.875,100.543,96.621)
C4: (-0.596,101.050,96.467)
P: (-2.775,103.859,101.154)
C4': (0.564,104.461,99.320)
C2': (0.843,103.931,97.037)
C2: (-0.344,100.058,94.519)
N1: (-1.566,99.505,94.525)
N3: (0.234,100.839,95.429)
N6: (-3.598,99.197,95.589)
N7: (-2.429,100.963,97.821)
N9: (-0.367,101.830,97.577)
O5': (-1.734,104.403,100.078)
O3': (0.332,106.251,97.673)
OP2: (-4.082,103.698,100.461)
C3': (0.074,104.877,97.944)
C1': (0.816,102.641,97.863)
C5': (-0.383,104.763,100.453)
O4': (0.748,103.027,99.224)
C8: (-1.499,101.716,98.351)
O2': (2.184,104.342,96.855)
C6: (-2.374,99.737,95.584)
C5: (-1.875,100.543,96.621)
C4: (-0.596,101.050,96.467)
P: (-2.775,103.859,101.154)
C4': (0.564,104.461,99.320)
C2': (0.843,103.931,97.037)
C2: (-0.344,100.058,94.519)
N1: (-1.566,99.505,94.525)
N3: (0.234,100.839,95.429)
N6: (-3.598,99.197,95.589)
N7: (-2.429,100.963,97.821)
N9: (-0.367,101.830,97.577)
O5': (-1.734,104.403,100.078)
O3': (0.332,106.251,97.673)
Image (generated by PyMOL):