Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0141:0140
Extra
PDB:
ATOM 1 O3' A A 140 61.402 122.337 40.248 1.00 37.03 O
ATOM 2 P C A 141 62.581 121.344 39.813 1.00 37.68 P
ATOM 3 OP1 C A 141 62.487 120.181 40.726 1.00 36.61 O
ATOM 4 OP2 C A 141 63.854 122.103 39.727 1.00 38.28 O
ATOM 5 O5' C A 141 62.163 120.878 38.346 1.00 37.01 O
ATOM 6 C5' C A 141 60.946 120.136 38.126 1.00 37.24 C
ATOM 7 C4' C A 141 60.738 119.889 36.653 1.00 35.89 C
ATOM 8 O4' C A 141 60.428 121.134 35.986 1.00 36.60 O
ATOM 9 C3' C A 141 61.953 119.356 35.921 1.00 35.74 C
ATOM 10 O3' C A 141 62.046 117.949 36.043 1.00 34.77 O
ATOM 11 C2' C A 141 61.680 119.780 34.489 1.00 37.64 C
ATOM 12 O2' C A 141 60.768 118.918 33.848 1.00 40.14 O
ATOM 13 C1' C A 141 61.028 121.147 34.701 1.00 38.23 C
ATOM 14 N1 C A 141 61.992 122.263 34.644 1.00 39.70 N
ATOM 15 C2 C A 141 62.319 122.811 33.400 1.00 40.06 C
ATOM 16 O2 C A 141 61.788 122.352 32.380 1.00 40.07 O
ATOM 17 N3 C A 141 63.208 123.826 33.340 1.00 41.13 N
ATOM 18 C4 C A 141 63.766 124.292 34.456 1.00 41.09 C
ATOM 19 N4 C A 141 64.646 125.285 34.344 1.00 41.70 N
ATOM 20 C5 C A 141 63.450 123.760 35.735 1.00 41.06 C
ATOM 21 C6 C A 141 62.566 122.757 35.784 1.00 41.20 C
ATOM 22 P C A 142 63.486 117.253 36.099 1.00 35.63 P
ATOM 23 OP1 C A 142 63.312 115.779 36.032 1.00 35.23 O
ATOM 24 OP2 C A 142 64.227 117.857 37.229 1.00 36.60 O
ATOM 25 O5' C A 142 64.183 117.730 34.757 1.00 33.90 O
TER
ATOM 1 O3' A B 139 59.980 128.125 41.101 1.00 45.17 O
ATOM 2 P A B 140 61.535 127.861 41.416 1.00 44.96 P
ATOM 3 OP1 A B 140 61.662 127.797 42.895 1.00 45.93 O
ATOM 4 OP2 A B 140 62.356 128.831 40.648 1.00 46.93 O
ATOM 5 O5' A B 140 61.813 126.400 40.850 1.00 41.75 O
ATOM 6 C5' A B 140 61.160 125.277 41.445 1.00 39.02 C
ATOM 7 C4' A B 140 60.391 124.497 40.408 1.00 38.04 C
ATOM 8 O4' A B 140 59.778 125.405 39.456 1.00 36.93 O
ATOM 9 C3' A B 140 61.195 123.551 39.540 1.00 36.81 C
ATOM 10 O3' A B 140 61.402 122.337 40.248 1.00 37.03 O
ATOM 11 C2' A B 140 60.265 123.368 38.348 1.00 36.09 C
ATOM 12 O2' A B 140 59.178 122.516 38.648 1.00 36.69 O
ATOM 13 C1' A B 140 59.717 124.786 38.184 1.00 35.86 C
ATOM 14 N9 A B 140 60.476 125.600 37.232 1.00 36.03 N
ATOM 15 C8 A B 140 61.421 126.561 37.491 1.00 34.10 C
ATOM 16 N7 A B 140 61.906 127.125 36.414 1.00 33.32 N
ATOM 17 C5 A B 140 61.242 126.490 35.374 1.00 33.01 C
ATOM 18 C6 A B 140 61.302 126.638 33.981 1.00 31.73 C
ATOM 19 N6 A B 140 62.106 127.500 33.360 1.00 32.45 N
ATOM 20 N1 A B 140 60.500 125.857 33.234 1.00 30.50 N
ATOM 21 C2 A B 140 59.705 124.987 33.846 1.00 30.57 C
ATOM 22 N3 A B 140 59.559 124.750 35.139 1.00 32.43 N
ATOM 23 C4 A B 140 60.364 125.546 35.861 1.00 34.57 C
ATOM 24 P C B 141 62.581 121.344 39.813 1.00 37.68 P
ATOM 25 OP1 C B 141 62.487 120.181 40.726 1.00 36.61 O
ATOM 26 OP2 C B 141 63.854 122.103 39.727 1.00 38.28 O
ATOM 27 O5' C B 141 62.163 120.878 38.346 1.00 37.01 O
TER
ATOM 2 P C A 141 62.581 121.344 39.813 1.00 37.68 P
ATOM 3 OP1 C A 141 62.487 120.181 40.726 1.00 36.61 O
ATOM 4 OP2 C A 141 63.854 122.103 39.727 1.00 38.28 O
ATOM 5 O5' C A 141 62.163 120.878 38.346 1.00 37.01 O
ATOM 6 C5' C A 141 60.946 120.136 38.126 1.00 37.24 C
ATOM 7 C4' C A 141 60.738 119.889 36.653 1.00 35.89 C
ATOM 8 O4' C A 141 60.428 121.134 35.986 1.00 36.60 O
ATOM 9 C3' C A 141 61.953 119.356 35.921 1.00 35.74 C
ATOM 10 O3' C A 141 62.046 117.949 36.043 1.00 34.77 O
ATOM 11 C2' C A 141 61.680 119.780 34.489 1.00 37.64 C
ATOM 12 O2' C A 141 60.768 118.918 33.848 1.00 40.14 O
ATOM 13 C1' C A 141 61.028 121.147 34.701 1.00 38.23 C
ATOM 14 N1 C A 141 61.992 122.263 34.644 1.00 39.70 N
ATOM 15 C2 C A 141 62.319 122.811 33.400 1.00 40.06 C
ATOM 16 O2 C A 141 61.788 122.352 32.380 1.00 40.07 O
ATOM 17 N3 C A 141 63.208 123.826 33.340 1.00 41.13 N
ATOM 18 C4 C A 141 63.766 124.292 34.456 1.00 41.09 C
ATOM 19 N4 C A 141 64.646 125.285 34.344 1.00 41.70 N
ATOM 20 C5 C A 141 63.450 123.760 35.735 1.00 41.06 C
ATOM 21 C6 C A 141 62.566 122.757 35.784 1.00 41.20 C
ATOM 22 P C A 142 63.486 117.253 36.099 1.00 35.63 P
ATOM 23 OP1 C A 142 63.312 115.779 36.032 1.00 35.23 O
ATOM 24 OP2 C A 142 64.227 117.857 37.229 1.00 36.60 O
ATOM 25 O5' C A 142 64.183 117.730 34.757 1.00 33.90 O
TER
ATOM 1 O3' A B 139 59.980 128.125 41.101 1.00 45.17 O
ATOM 2 P A B 140 61.535 127.861 41.416 1.00 44.96 P
ATOM 3 OP1 A B 140 61.662 127.797 42.895 1.00 45.93 O
ATOM 4 OP2 A B 140 62.356 128.831 40.648 1.00 46.93 O
ATOM 5 O5' A B 140 61.813 126.400 40.850 1.00 41.75 O
ATOM 6 C5' A B 140 61.160 125.277 41.445 1.00 39.02 C
ATOM 7 C4' A B 140 60.391 124.497 40.408 1.00 38.04 C
ATOM 8 O4' A B 140 59.778 125.405 39.456 1.00 36.93 O
ATOM 9 C3' A B 140 61.195 123.551 39.540 1.00 36.81 C
ATOM 10 O3' A B 140 61.402 122.337 40.248 1.00 37.03 O
ATOM 11 C2' A B 140 60.265 123.368 38.348 1.00 36.09 C
ATOM 12 O2' A B 140 59.178 122.516 38.648 1.00 36.69 O
ATOM 13 C1' A B 140 59.717 124.786 38.184 1.00 35.86 C
ATOM 14 N9 A B 140 60.476 125.600 37.232 1.00 36.03 N
ATOM 15 C8 A B 140 61.421 126.561 37.491 1.00 34.10 C
ATOM 16 N7 A B 140 61.906 127.125 36.414 1.00 33.32 N
ATOM 17 C5 A B 140 61.242 126.490 35.374 1.00 33.01 C
ATOM 18 C6 A B 140 61.302 126.638 33.981 1.00 31.73 C
ATOM 19 N6 A B 140 62.106 127.500 33.360 1.00 32.45 N
ATOM 20 N1 A B 140 60.500 125.857 33.234 1.00 30.50 N
ATOM 21 C2 A B 140 59.705 124.987 33.846 1.00 30.57 C
ATOM 22 N3 A B 140 59.559 124.750 35.139 1.00 32.43 N
ATOM 23 C4 A B 140 60.364 125.546 35.861 1.00 34.57 C
ATOM 24 P C B 141 62.581 121.344 39.813 1.00 37.68 P
ATOM 25 OP1 C B 141 62.487 120.181 40.726 1.00 36.61 O
ATOM 26 OP2 C B 141 63.854 122.103 39.727 1.00 38.28 O
ATOM 27 O5' C B 141 62.163 120.878 38.346 1.00 37.01 O
TER
Atoms:
C2: (62.319,122.811,33.400)
OP1: (62.487,120.181,40.726)
OP2: (63.854,122.103,39.727)
C4: (63.766,124.292,34.456)
O5': (62.163,120.878,38.346)
C3': (61.953,119.356,35.921)
C1': (61.028,121.147,34.701)
O4': (60.428,121.134,35.986)
C5': (60.946,120.136,38.126)
P: (62.581,121.344,39.813)
O2: (61.788,122.352,32.380)
C4': (60.738,119.889,36.653)
C2': (61.680,119.780,34.489)
O2': (60.768,118.918,33.848)
N1: (61.992,122.263,34.644)
N3: (63.208,123.826,33.340)
N4: (64.646,125.285,34.344)
C6: (62.566,122.757,35.784)
C5: (63.450,123.760,35.735)
O3': (62.046,117.949,36.043)
OP1: (62.487,120.181,40.726)
OP2: (63.854,122.103,39.727)
C4: (63.766,124.292,34.456)
O5': (62.163,120.878,38.346)
C3': (61.953,119.356,35.921)
C1': (61.028,121.147,34.701)
O4': (60.428,121.134,35.986)
C5': (60.946,120.136,38.126)
P: (62.581,121.344,39.813)
O2: (61.788,122.352,32.380)
C4': (60.738,119.889,36.653)
C2': (61.680,119.780,34.489)
O2': (60.768,118.918,33.848)
N1: (61.992,122.263,34.644)
N3: (63.208,123.826,33.340)
N4: (64.646,125.285,34.344)
C6: (62.566,122.757,35.784)
C5: (63.450,123.760,35.735)
O3': (62.046,117.949,36.043)
OP1: (61.662,127.797,42.895)
OP2: (62.356,128.831,40.648)
C3': (61.195,123.551,39.540)
C1': (59.717,124.786,38.184)
C5': (61.160,125.277,41.445)
O4': (59.778,125.405,39.456)
C8: (61.421,126.561,37.491)
O2': (59.178,122.516,38.648)
C6: (61.302,126.638,33.981)
C5: (61.242,126.490,35.374)
C4: (60.364,125.546,35.861)
P: (61.535,127.861,41.416)
C4': (60.391,124.497,40.408)
C2': (60.265,123.368,38.348)
C2: (59.705,124.987,33.846)
N1: (60.500,125.857,33.234)
N3: (59.559,124.750,35.139)
N6: (62.106,127.500,33.360)
N7: (61.906,127.125,36.414)
N9: (60.476,125.600,37.232)
O5': (61.813,126.400,40.850)
O3': (61.402,122.337,40.248)
OP2: (62.356,128.831,40.648)
C3': (61.195,123.551,39.540)
C1': (59.717,124.786,38.184)
C5': (61.160,125.277,41.445)
O4': (59.778,125.405,39.456)
C8: (61.421,126.561,37.491)
O2': (59.178,122.516,38.648)
C6: (61.302,126.638,33.981)
C5: (61.242,126.490,35.374)
C4: (60.364,125.546,35.861)
P: (61.535,127.861,41.416)
C4': (60.391,124.497,40.408)
C2': (60.265,123.368,38.348)
C2: (59.705,124.987,33.846)
N1: (60.500,125.857,33.234)
N3: (59.559,124.750,35.139)
N6: (62.106,127.500,33.360)
N7: (61.906,127.125,36.414)
N9: (60.476,125.600,37.232)
O5': (61.813,126.400,40.850)
O3': (61.402,122.337,40.248)
Image (generated by PyMOL):