ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUX:I4:I3

Extra

PDB:
ATOM 1 O3' A A 3 -60.898 -10.216 -22.505 1.00 91.57 O
ATOM 2 P C A 4 -61.003 -10.896 -21.077 1.00 63.37 P
ATOM 3 OP1 C A 4 -62.233 -11.713 -21.166 1.00 81.42 O
ATOM 4 OP2 C A 4 -60.822 -9.843 -20.055 1.00 66.98 O
ATOM 5 O5' C A 4 -59.737 -11.848 -20.955 1.00 56.05 O
ATOM 6 C5' C A 4 -59.723 -13.158 -21.522 1.00 74.37 C
ATOM 7 C4' C A 4 -58.364 -13.791 -21.298 1.00 80.58 C
ATOM 8 O4' C A 4 -57.368 -12.986 -21.974 1.00 78.99 O
ATOM 9 C3' C A 4 -57.843 -13.826 -19.865 1.00 90.61 C
ATOM 10 O3' C A 4 -58.420 -14.881 -19.087 1.00 96.21 O
ATOM 11 C2' C A 4 -56.361 -14.056 -20.099 1.00 85.97 C
ATOM 12 O2' C A 4 -56.049 -15.410 -20.358 1.00 94.10 O
ATOM 13 C1' C A 4 -56.126 -13.148 -21.313 1.00 66.17 C
ATOM 14 N1 C A 4 -55.542 -11.834 -20.862 1.00 51.72 N
ATOM 15 C2 C A 4 -54.141 -11.701 -20.750 1.00 64.66 C
ATOM 16 O2 C A 4 -53.363 -12.624 -21.055 1.00 50.54 O
ATOM 17 N3 C A 4 -53.646 -10.520 -20.308 1.00 68.76 N
ATOM 18 C4 C A 4 -54.420 -9.500 -19.967 1.00 69.56 C
ATOM 19 N4 C A 4 -53.801 -8.386 -19.560 1.00 51.39 N
ATOM 20 C5 C A 4 -55.840 -9.608 -20.054 1.00 68.82 C
ATOM 21 C6 C A 4 -56.348 -10.777 -20.491 1.00 63.81 C
ATOM 22 P A A 5 -59.376 -14.584 -17.836 1.00 89.56 P
ATOM 23 OP1 A A 5 -60.739 -14.956 -18.285 1.00 69.38 O
ATOM 24 OP2 A A 5 -59.050 -13.267 -17.220 1.00 65.08 O
ATOM 25 O5' A A 5 -58.940 -15.672 -16.770 1.00 84.05 O
TER

ATOM 1 O3' C B 2 -60.554 -4.191 -23.173 1.00 93.33 O
ATOM 2 P A B 3 -60.401 -5.088 -21.853 1.00 95.88 P
ATOM 3 OP1 A B 3 -61.743 -5.096 -21.214 1.00 75.70 O
ATOM 4 OP2 A B 3 -59.202 -4.693 -21.079 1.00 76.05 O
ATOM 5 O5' A B 3 -60.077 -6.528 -22.443 1.00 89.19 O
ATOM 6 C5' A B 3 -60.966 -7.197 -23.323 1.00 92.31 C
ATOM 7 C4' A B 3 -60.278 -8.421 -23.885 1.00 77.04 C
ATOM 8 O4' A B 3 -59.067 -8.048 -24.568 1.00 74.85 O
ATOM 9 C3' A B 3 -59.804 -9.410 -22.841 1.00 81.21 C
ATOM 10 O3' A B 3 -60.898 -10.216 -22.505 1.00 91.57 O
ATOM 11 C2' A B 3 -58.715 -10.173 -23.573 1.00 75.82 C
ATOM 12 O2' A B 3 -59.248 -11.199 -24.392 1.00 70.51 O
ATOM 13 C1' A B 3 -58.083 -9.050 -24.392 1.00 63.22 C
ATOM 14 N9 A B 3 -56.903 -8.414 -23.806 1.00 52.80 N
ATOM 15 C8 A B 3 -56.778 -7.181 -23.197 1.00 54.29 C
ATOM 16 N7 A B 3 -55.567 -6.891 -22.790 1.00 54.02 N
ATOM 17 C5 A B 3 -54.845 -8.008 -23.167 1.00 54.55 C
ATOM 18 C6 A B 3 -53.486 -8.330 -23.034 1.00 55.31 C
ATOM 19 N6 A B 3 -52.619 -7.495 -22.449 1.00 52.31 N
ATOM 20 N1 A B 3 -53.086 -9.541 -23.517 1.00 52.55 N
ATOM 21 C2 A B 3 -53.964 -10.365 -24.113 1.00 65.07 C
ATOM 22 N3 A B 3 -55.278 -10.163 -24.299 1.00 71.85 N
ATOM 23 C4 A B 3 -55.649 -8.959 -23.797 1.00 62.58 C
ATOM 24 P C B 4 -61.003 -10.896 -21.077 1.00 63.37 P
ATOM 25 OP1 C B 4 -62.233 -11.713 -21.166 1.00 81.42 O
ATOM 26 OP2 C B 4 -60.822 -9.843 -20.055 1.00 66.98 O
ATOM 27 O5' C B 4 -59.737 -11.848 -20.955 1.00 56.05 O
TER

Atoms:
C2: (-54.141,-11.701,-20.750)
OP1: (-62.233,-11.713,-21.166)
OP2: (-60.822,-9.843,-20.055)
C4: (-54.420,-9.500,-19.967)
O5': (-59.737,-11.848,-20.955)
C3': (-57.843,-13.826,-19.865)
C1': (-56.126,-13.148,-21.313)
O4': (-57.368,-12.986,-21.974)
C5': (-59.723,-13.158,-21.522)
P: (-61.003,-10.896,-21.077)
O2: (-53.363,-12.624,-21.055)
C4': (-58.364,-13.791,-21.298)
C2': (-56.361,-14.056,-20.099)
O2': (-56.049,-15.410,-20.358)
N1: (-55.542,-11.834,-20.862)
N3: (-53.646,-10.520,-20.308)
N4: (-53.801,-8.386,-19.560)
C6: (-56.348,-10.777,-20.491)
C5: (-55.840,-9.608,-20.054)
O3': (-58.420,-14.881,-19.087)
OP1: (-61.743,-5.096,-21.214)
OP2: (-59.202,-4.693,-21.079)
C3': (-59.804,-9.410,-22.841)
C1': (-58.083,-9.050,-24.392)
C5': (-60.966,-7.197,-23.323)
O4': (-59.067,-8.048,-24.568)
C8: (-56.778,-7.181,-23.197)
O2': (-59.248,-11.199,-24.392)
C6: (-53.486,-8.330,-23.034)
C5: (-54.845,-8.008,-23.167)
C4: (-55.649,-8.959,-23.797)
P: (-60.401,-5.088,-21.853)
C4': (-60.278,-8.421,-23.885)
C2': (-58.715,-10.173,-23.573)
C2: (-53.964,-10.365,-24.113)
N1: (-53.086,-9.541,-23.517)
N3: (-55.278,-10.163,-24.299)
N6: (-52.619,-7.495,-22.449)
N7: (-55.567,-6.891,-22.790)
N9: (-56.903,-8.414,-23.806)
O5': (-60.077,-6.528,-22.443)
O3': (-60.898,-10.216,-22.505)
Image (generated by PyMOL):
PyMOL image
show in jmol