Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B62:B37
Extra
PDB:
ATOM 1 O3' A A 61 -6.077 -23.450 11.140 1.00 69.84 O
ATOM 2 P A A 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 3 OP1 A A 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 4 OP2 A A 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 5 O5' A A 62 -5.726 -25.286 12.780 1.00 66.82 O
ATOM 6 C5' A A 62 -6.487 -26.294 12.120 1.00 65.31 C
ATOM 7 C4' A A 62 -5.623 -27.521 11.919 1.00 64.12 C
ATOM 8 O4' A A 62 -4.428 -27.151 11.187 1.00 64.17 O
ATOM 9 C3' A A 62 -5.078 -28.154 13.190 1.00 63.10 C
ATOM 10 O3' A A 62 -6.045 -29.004 13.768 1.00 62.46 O
ATOM 11 C2' A A 62 -3.880 -28.920 12.643 1.00 62.87 C
ATOM 12 O2' A A 62 -4.228 -30.100 11.946 1.00 63.04 O
ATOM 13 C1' A A 62 -3.323 -27.908 11.649 1.00 63.25 C
ATOM 14 N9 A A 62 -2.320 -27.034 12.258 1.00 62.82 N
ATOM 15 C8 A A 62 -2.514 -25.793 12.794 1.00 63.36 C
ATOM 16 N7 A A 62 -1.427 -25.248 13.283 1.00 63.38 N
ATOM 17 C5 A A 62 -0.454 -26.200 13.052 1.00 62.83 C
ATOM 18 C6 A A 62 0.925 -26.230 13.334 1.00 62.98 C
ATOM 19 N6 A A 62 1.566 -25.225 13.940 1.00 63.38 N
ATOM 20 N1 A A 62 1.616 -27.334 12.972 1.00 62.56 N
ATOM 21 C2 A A 62 0.969 -28.340 12.366 1.00 61.81 C
ATOM 22 N3 A A 62 -0.322 -28.419 12.052 1.00 61.62 N
ATOM 23 C4 A A 62 -0.984 -27.310 12.424 1.00 62.20 C
ATOM 24 P A A 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 25 OP1 A A 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 26 OP2 A A 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 27 O5' A A 63 -4.934 -30.080 15.709 1.00 61.15 O
TER
ATOM 1 O3' G B 36 2.161 -16.521 18.654 1.00 80.49 O
ATOM 2 P C B 37 2.071 -15.803 17.234 1.00 81.20 P
ATOM 3 OP1 C B 37 2.777 -14.509 17.366 1.00 82.53 O
ATOM 4 OP2 C B 37 0.669 -15.830 16.757 1.00 80.89 O
ATOM 5 O5' C B 37 2.927 -16.784 16.306 1.00 80.56 O
ATOM 6 C5' C B 37 4.252 -17.183 16.665 1.00 80.26 C
ATOM 7 C4' C B 37 4.710 -18.331 15.781 1.00 79.60 C
ATOM 8 O4' C B 37 3.778 -19.443 15.891 1.00 79.26 O
ATOM 9 C3' C B 37 4.793 -17.988 14.295 1.00 79.66 C
ATOM 10 O3' C B 37 5.975 -18.554 13.726 1.00 79.11 O
ATOM 11 C2' C B 37 3.516 -18.615 13.740 1.00 79.44 C
ATOM 12 O2' C B 37 3.578 -18.916 12.360 1.00 79.55 O
ATOM 13 C1' C B 37 3.444 -19.881 14.589 1.00 78.98 C
ATOM 14 N1 C B 37 2.102 -20.568 14.568 1.00 78.80 N
ATOM 15 C2 C B 37 2.014 -21.950 14.301 1.00 78.07 C
ATOM 16 O2 C B 37 3.041 -22.610 14.095 1.00 77.58 O
ATOM 17 N3 C B 37 0.786 -22.538 14.276 1.00 77.77 N
ATOM 18 C4 C B 37 -0.313 -21.810 14.499 1.00 78.08 C
ATOM 19 N4 C B 37 -1.496 -22.427 14.463 1.00 77.64 N
ATOM 20 C5 C B 37 -0.249 -20.409 14.770 1.00 78.89 C
ATOM 21 C6 C B 37 0.963 -19.838 14.792 1.00 79.18 C
ATOM 22 P A B 38 6.724 -17.875 12.478 1.00 79.08 P
ATOM 23 OP1 A B 38 8.073 -17.487 12.945 1.00 79.28 O
ATOM 24 OP2 A B 38 5.848 -16.866 11.835 1.00 79.21 O
ATOM 25 O5' A B 38 6.858 -19.108 11.470 1.00 77.94 O
TER
ATOM 2 P A A 62 -6.149 -23.747 12.711 1.00 68.12 P
ATOM 3 OP1 A A 62 -7.567 -23.596 13.109 1.00 68.45 O
ATOM 4 OP2 A A 62 -5.102 -22.977 13.419 1.00 67.86 O
ATOM 5 O5' A A 62 -5.726 -25.286 12.780 1.00 66.82 O
ATOM 6 C5' A A 62 -6.487 -26.294 12.120 1.00 65.31 C
ATOM 7 C4' A A 62 -5.623 -27.521 11.919 1.00 64.12 C
ATOM 8 O4' A A 62 -4.428 -27.151 11.187 1.00 64.17 O
ATOM 9 C3' A A 62 -5.078 -28.154 13.190 1.00 63.10 C
ATOM 10 O3' A A 62 -6.045 -29.004 13.768 1.00 62.46 O
ATOM 11 C2' A A 62 -3.880 -28.920 12.643 1.00 62.87 C
ATOM 12 O2' A A 62 -4.228 -30.100 11.946 1.00 63.04 O
ATOM 13 C1' A A 62 -3.323 -27.908 11.649 1.00 63.25 C
ATOM 14 N9 A A 62 -2.320 -27.034 12.258 1.00 62.82 N
ATOM 15 C8 A A 62 -2.514 -25.793 12.794 1.00 63.36 C
ATOM 16 N7 A A 62 -1.427 -25.248 13.283 1.00 63.38 N
ATOM 17 C5 A A 62 -0.454 -26.200 13.052 1.00 62.83 C
ATOM 18 C6 A A 62 0.925 -26.230 13.334 1.00 62.98 C
ATOM 19 N6 A A 62 1.566 -25.225 13.940 1.00 63.38 N
ATOM 20 N1 A A 62 1.616 -27.334 12.972 1.00 62.56 N
ATOM 21 C2 A A 62 0.969 -28.340 12.366 1.00 61.81 C
ATOM 22 N3 A A 62 -0.322 -28.419 12.052 1.00 61.62 N
ATOM 23 C4 A A 62 -0.984 -27.310 12.424 1.00 62.20 C
ATOM 24 P A A 63 -6.168 -29.132 15.357 1.00 62.06 P
ATOM 25 OP1 A A 63 -7.437 -29.844 15.629 1.00 61.83 O
ATOM 26 OP2 A A 63 -5.907 -27.813 15.983 1.00 62.42 O
ATOM 27 O5' A A 63 -4.934 -30.080 15.709 1.00 61.15 O
TER
ATOM 1 O3' G B 36 2.161 -16.521 18.654 1.00 80.49 O
ATOM 2 P C B 37 2.071 -15.803 17.234 1.00 81.20 P
ATOM 3 OP1 C B 37 2.777 -14.509 17.366 1.00 82.53 O
ATOM 4 OP2 C B 37 0.669 -15.830 16.757 1.00 80.89 O
ATOM 5 O5' C B 37 2.927 -16.784 16.306 1.00 80.56 O
ATOM 6 C5' C B 37 4.252 -17.183 16.665 1.00 80.26 C
ATOM 7 C4' C B 37 4.710 -18.331 15.781 1.00 79.60 C
ATOM 8 O4' C B 37 3.778 -19.443 15.891 1.00 79.26 O
ATOM 9 C3' C B 37 4.793 -17.988 14.295 1.00 79.66 C
ATOM 10 O3' C B 37 5.975 -18.554 13.726 1.00 79.11 O
ATOM 11 C2' C B 37 3.516 -18.615 13.740 1.00 79.44 C
ATOM 12 O2' C B 37 3.578 -18.916 12.360 1.00 79.55 O
ATOM 13 C1' C B 37 3.444 -19.881 14.589 1.00 78.98 C
ATOM 14 N1 C B 37 2.102 -20.568 14.568 1.00 78.80 N
ATOM 15 C2 C B 37 2.014 -21.950 14.301 1.00 78.07 C
ATOM 16 O2 C B 37 3.041 -22.610 14.095 1.00 77.58 O
ATOM 17 N3 C B 37 0.786 -22.538 14.276 1.00 77.77 N
ATOM 18 C4 C B 37 -0.313 -21.810 14.499 1.00 78.08 C
ATOM 19 N4 C B 37 -1.496 -22.427 14.463 1.00 77.64 N
ATOM 20 C5 C B 37 -0.249 -20.409 14.770 1.00 78.89 C
ATOM 21 C6 C B 37 0.963 -19.838 14.792 1.00 79.18 C
ATOM 22 P A B 38 6.724 -17.875 12.478 1.00 79.08 P
ATOM 23 OP1 A B 38 8.073 -17.487 12.945 1.00 79.28 O
ATOM 24 OP2 A B 38 5.848 -16.866 11.835 1.00 79.21 O
ATOM 25 O5' A B 38 6.858 -19.108 11.470 1.00 77.94 O
TER
Atoms:
OP1: (-7.567,-23.596,13.109)
OP2: (-5.102,-22.977,13.419)
C3': (-5.078,-28.154,13.190)
C1': (-3.323,-27.908,11.649)
C5': (-6.487,-26.294,12.120)
O4': (-4.428,-27.151,11.187)
C8: (-2.514,-25.793,12.794)
O2': (-4.228,-30.100,11.946)
C6: (0.925,-26.230,13.334)
C5: (-0.454,-26.200,13.052)
C4: (-0.984,-27.310,12.424)
P: (-6.149,-23.747,12.711)
C4': (-5.623,-27.521,11.919)
C2': (-3.880,-28.920,12.643)
C2: (0.969,-28.340,12.366)
N1: (1.616,-27.334,12.972)
N3: (-0.322,-28.419,12.052)
N6: (1.566,-25.225,13.940)
N7: (-1.427,-25.248,13.283)
N9: (-2.320,-27.034,12.258)
O5': (-5.726,-25.286,12.780)
O3': (-6.045,-29.004,13.768)
OP2: (-5.102,-22.977,13.419)
C3': (-5.078,-28.154,13.190)
C1': (-3.323,-27.908,11.649)
C5': (-6.487,-26.294,12.120)
O4': (-4.428,-27.151,11.187)
C8: (-2.514,-25.793,12.794)
O2': (-4.228,-30.100,11.946)
C6: (0.925,-26.230,13.334)
C5: (-0.454,-26.200,13.052)
C4: (-0.984,-27.310,12.424)
P: (-6.149,-23.747,12.711)
C4': (-5.623,-27.521,11.919)
C2': (-3.880,-28.920,12.643)
C2: (0.969,-28.340,12.366)
N1: (1.616,-27.334,12.972)
N3: (-0.322,-28.419,12.052)
N6: (1.566,-25.225,13.940)
N7: (-1.427,-25.248,13.283)
N9: (-2.320,-27.034,12.258)
O5': (-5.726,-25.286,12.780)
O3': (-6.045,-29.004,13.768)
C2: (2.014,-21.950,14.301)
OP1: (2.777,-14.509,17.366)
OP2: (0.669,-15.830,16.757)
C4: (-0.313,-21.810,14.499)
O5': (2.927,-16.784,16.306)
C3': (4.793,-17.988,14.295)
C1': (3.444,-19.881,14.589)
O4': (3.778,-19.443,15.891)
C5': (4.252,-17.183,16.665)
P: (2.071,-15.803,17.234)
O2: (3.041,-22.610,14.095)
C4': (4.710,-18.331,15.781)
C2': (3.516,-18.615,13.740)
O2': (3.578,-18.916,12.360)
N1: (2.102,-20.568,14.568)
N3: (0.786,-22.538,14.276)
N4: (-1.496,-22.427,14.463)
C6: (0.963,-19.838,14.792)
C5: (-0.249,-20.409,14.770)
O3': (5.975,-18.554,13.726)
OP1: (2.777,-14.509,17.366)
OP2: (0.669,-15.830,16.757)
C4: (-0.313,-21.810,14.499)
O5': (2.927,-16.784,16.306)
C3': (4.793,-17.988,14.295)
C1': (3.444,-19.881,14.589)
O4': (3.778,-19.443,15.891)
C5': (4.252,-17.183,16.665)
P: (2.071,-15.803,17.234)
O2: (3.041,-22.610,14.095)
C4': (4.710,-18.331,15.781)
C2': (3.516,-18.615,13.740)
O2': (3.578,-18.916,12.360)
N1: (2.102,-20.568,14.568)
N3: (0.786,-22.538,14.276)
N4: (-1.496,-22.427,14.463)
C6: (0.963,-19.838,14.792)
C5: (-0.249,-20.409,14.770)
O3': (5.975,-18.554,13.726)
Image (generated by PyMOL):