Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02495:02494
Extra
PDB:
ATOM 1 O3' A A2494 43.965 135.310 113.867 1.00 27.23 O
ATOM 2 P C A2495 43.019 136.375 114.619 1.00 29.09 P
ATOM 3 OP1 C A2495 42.318 135.642 115.708 1.00 28.40 O
ATOM 4 OP2 C A2495 42.222 137.125 113.620 1.00 27.61 O
ATOM 5 O5' C A2495 44.049 137.390 115.292 1.00 29.00 O
ATOM 6 C5' C A2495 44.950 136.941 116.315 1.00 30.36 C
ATOM 7 C4' C A2495 46.211 137.763 116.304 1.00 32.19 C
ATOM 8 O4' C A2495 46.776 137.764 114.966 1.00 32.45 O
ATOM 9 C3' C A2495 46.072 139.240 116.635 1.00 33.36 C
ATOM 10 O3' C A2495 46.005 139.444 118.043 1.00 33.36 O
ATOM 11 C2' C A2495 47.349 139.813 116.031 1.00 34.24 C
ATOM 12 O2' C A2495 48.499 139.579 116.824 1.00 35.36 O
ATOM 13 C1' C A2495 47.464 138.988 114.745 1.00 33.36 C
ATOM 14 N1 C A2495 46.881 139.675 113.573 1.00 32.26 N
ATOM 15 C2 C A2495 47.650 140.639 112.913 1.00 33.01 C
ATOM 16 O2 C A2495 48.803 140.867 113.311 1.00 34.27 O
ATOM 17 N3 C A2495 47.122 141.302 111.860 1.00 33.45 N
ATOM 18 C4 C A2495 45.882 141.035 111.458 1.00 33.11 C
ATOM 19 N4 C A2495 45.395 141.737 110.426 1.00 31.47 N
ATOM 20 C5 C A2495 45.081 140.043 112.098 1.00 32.74 C
ATOM 21 C6 C A2495 45.615 139.395 113.141 1.00 32.01 C
ATOM 22 P U A2496 45.304 140.763 118.635 1.00 34.08 P
ATOM 23 OP1 U A2496 45.155 140.525 120.086 1.00 34.09 O
ATOM 24 OP2 U A2496 44.110 141.117 117.829 1.00 36.13 O
ATOM 25 O5' U A2496 46.383 141.912 118.414 1.00 33.55 O
TER
ATOM 1 O3' U B2493 41.129 134.298 108.563 1.00 27.64 O
ATOM 2 P A B2494 41.074 135.141 109.936 1.00 27.58 P
ATOM 3 OP1 A B2494 40.297 134.338 110.921 1.00 26.40 O
ATOM 4 OP2 A B2494 40.654 136.531 109.641 1.00 26.61 O
ATOM 5 O5' A B2494 42.583 135.154 110.427 1.00 25.47 O
ATOM 6 C5' A B2494 43.148 133.998 111.056 1.00 26.20 C
ATOM 7 C4' A B2494 44.464 134.350 111.684 1.00 27.42 C
ATOM 8 O4' A B2494 45.419 134.665 110.639 1.00 27.53 O
ATOM 9 C3' A B2494 44.457 135.591 112.560 1.00 27.26 C
ATOM 10 O3' A B2494 43.965 135.310 113.867 1.00 27.23 O
ATOM 11 C2' A B2494 45.928 135.987 112.554 1.00 27.94 C
ATOM 12 O2' A B2494 46.700 135.230 113.465 1.00 29.43 O
ATOM 13 C1' A B2494 46.330 135.640 111.114 1.00 27.55 C
ATOM 14 N9 A B2494 46.296 136.787 110.208 1.00 26.19 N
ATOM 15 C8 A B2494 45.285 137.190 109.377 1.00 26.02 C
ATOM 16 N7 A B2494 45.549 138.292 108.722 1.00 25.22 N
ATOM 17 C5 A B2494 46.824 138.632 109.144 1.00 26.77 C
ATOM 18 C6 A B2494 47.666 139.712 108.835 1.00 28.23 C
ATOM 19 N6 A B2494 47.338 140.691 107.988 1.00 30.97 N
ATOM 20 N1 A B2494 48.873 139.757 109.435 1.00 27.96 N
ATOM 21 C2 A B2494 49.202 138.780 110.285 1.00 27.51 C
ATOM 22 N3 A B2494 48.499 137.719 110.658 1.00 27.06 N
ATOM 23 C4 A B2494 47.302 137.706 110.047 1.00 26.61 C
ATOM 24 P C B2495 43.019 136.375 114.619 1.00 29.09 P
ATOM 25 OP1 C B2495 42.318 135.642 115.708 1.00 28.40 O
ATOM 26 OP2 C B2495 42.222 137.125 113.620 1.00 27.61 O
ATOM 27 O5' C B2495 44.049 137.390 115.292 1.00 29.00 O
TER
ATOM 2 P C A2495 43.019 136.375 114.619 1.00 29.09 P
ATOM 3 OP1 C A2495 42.318 135.642 115.708 1.00 28.40 O
ATOM 4 OP2 C A2495 42.222 137.125 113.620 1.00 27.61 O
ATOM 5 O5' C A2495 44.049 137.390 115.292 1.00 29.00 O
ATOM 6 C5' C A2495 44.950 136.941 116.315 1.00 30.36 C
ATOM 7 C4' C A2495 46.211 137.763 116.304 1.00 32.19 C
ATOM 8 O4' C A2495 46.776 137.764 114.966 1.00 32.45 O
ATOM 9 C3' C A2495 46.072 139.240 116.635 1.00 33.36 C
ATOM 10 O3' C A2495 46.005 139.444 118.043 1.00 33.36 O
ATOM 11 C2' C A2495 47.349 139.813 116.031 1.00 34.24 C
ATOM 12 O2' C A2495 48.499 139.579 116.824 1.00 35.36 O
ATOM 13 C1' C A2495 47.464 138.988 114.745 1.00 33.36 C
ATOM 14 N1 C A2495 46.881 139.675 113.573 1.00 32.26 N
ATOM 15 C2 C A2495 47.650 140.639 112.913 1.00 33.01 C
ATOM 16 O2 C A2495 48.803 140.867 113.311 1.00 34.27 O
ATOM 17 N3 C A2495 47.122 141.302 111.860 1.00 33.45 N
ATOM 18 C4 C A2495 45.882 141.035 111.458 1.00 33.11 C
ATOM 19 N4 C A2495 45.395 141.737 110.426 1.00 31.47 N
ATOM 20 C5 C A2495 45.081 140.043 112.098 1.00 32.74 C
ATOM 21 C6 C A2495 45.615 139.395 113.141 1.00 32.01 C
ATOM 22 P U A2496 45.304 140.763 118.635 1.00 34.08 P
ATOM 23 OP1 U A2496 45.155 140.525 120.086 1.00 34.09 O
ATOM 24 OP2 U A2496 44.110 141.117 117.829 1.00 36.13 O
ATOM 25 O5' U A2496 46.383 141.912 118.414 1.00 33.55 O
TER
ATOM 1 O3' U B2493 41.129 134.298 108.563 1.00 27.64 O
ATOM 2 P A B2494 41.074 135.141 109.936 1.00 27.58 P
ATOM 3 OP1 A B2494 40.297 134.338 110.921 1.00 26.40 O
ATOM 4 OP2 A B2494 40.654 136.531 109.641 1.00 26.61 O
ATOM 5 O5' A B2494 42.583 135.154 110.427 1.00 25.47 O
ATOM 6 C5' A B2494 43.148 133.998 111.056 1.00 26.20 C
ATOM 7 C4' A B2494 44.464 134.350 111.684 1.00 27.42 C
ATOM 8 O4' A B2494 45.419 134.665 110.639 1.00 27.53 O
ATOM 9 C3' A B2494 44.457 135.591 112.560 1.00 27.26 C
ATOM 10 O3' A B2494 43.965 135.310 113.867 1.00 27.23 O
ATOM 11 C2' A B2494 45.928 135.987 112.554 1.00 27.94 C
ATOM 12 O2' A B2494 46.700 135.230 113.465 1.00 29.43 O
ATOM 13 C1' A B2494 46.330 135.640 111.114 1.00 27.55 C
ATOM 14 N9 A B2494 46.296 136.787 110.208 1.00 26.19 N
ATOM 15 C8 A B2494 45.285 137.190 109.377 1.00 26.02 C
ATOM 16 N7 A B2494 45.549 138.292 108.722 1.00 25.22 N
ATOM 17 C5 A B2494 46.824 138.632 109.144 1.00 26.77 C
ATOM 18 C6 A B2494 47.666 139.712 108.835 1.00 28.23 C
ATOM 19 N6 A B2494 47.338 140.691 107.988 1.00 30.97 N
ATOM 20 N1 A B2494 48.873 139.757 109.435 1.00 27.96 N
ATOM 21 C2 A B2494 49.202 138.780 110.285 1.00 27.51 C
ATOM 22 N3 A B2494 48.499 137.719 110.658 1.00 27.06 N
ATOM 23 C4 A B2494 47.302 137.706 110.047 1.00 26.61 C
ATOM 24 P C B2495 43.019 136.375 114.619 1.00 29.09 P
ATOM 25 OP1 C B2495 42.318 135.642 115.708 1.00 28.40 O
ATOM 26 OP2 C B2495 42.222 137.125 113.620 1.00 27.61 O
ATOM 27 O5' C B2495 44.049 137.390 115.292 1.00 29.00 O
TER
Atoms:
C2: (47.650,140.639,112.913)
OP1: (42.318,135.642,115.708)
OP2: (42.222,137.125,113.620)
C4: (45.882,141.035,111.458)
O5': (44.049,137.390,115.292)
C3': (46.072,139.240,116.635)
C1': (47.464,138.988,114.745)
O4': (46.776,137.764,114.966)
C5': (44.950,136.941,116.315)
P: (43.019,136.375,114.619)
O2: (48.803,140.867,113.311)
C4': (46.211,137.763,116.304)
C2': (47.349,139.813,116.031)
O2': (48.499,139.579,116.824)
N1: (46.881,139.675,113.573)
N3: (47.122,141.302,111.860)
N4: (45.395,141.737,110.426)
C6: (45.615,139.395,113.141)
C5: (45.081,140.043,112.098)
O3': (46.005,139.444,118.043)
OP1: (42.318,135.642,115.708)
OP2: (42.222,137.125,113.620)
C4: (45.882,141.035,111.458)
O5': (44.049,137.390,115.292)
C3': (46.072,139.240,116.635)
C1': (47.464,138.988,114.745)
O4': (46.776,137.764,114.966)
C5': (44.950,136.941,116.315)
P: (43.019,136.375,114.619)
O2: (48.803,140.867,113.311)
C4': (46.211,137.763,116.304)
C2': (47.349,139.813,116.031)
O2': (48.499,139.579,116.824)
N1: (46.881,139.675,113.573)
N3: (47.122,141.302,111.860)
N4: (45.395,141.737,110.426)
C6: (45.615,139.395,113.141)
C5: (45.081,140.043,112.098)
O3': (46.005,139.444,118.043)
OP1: (40.297,134.338,110.921)
OP2: (40.654,136.531,109.641)
C3': (44.457,135.591,112.560)
C1': (46.330,135.640,111.114)
C5': (43.148,133.998,111.056)
O4': (45.419,134.665,110.639)
C8: (45.285,137.190,109.377)
O2': (46.700,135.230,113.465)
C6: (47.666,139.712,108.835)
C5: (46.824,138.632,109.144)
C4: (47.302,137.706,110.047)
P: (41.074,135.141,109.936)
C4': (44.464,134.350,111.684)
C2': (45.928,135.987,112.554)
C2: (49.202,138.780,110.285)
N1: (48.873,139.757,109.435)
N3: (48.499,137.719,110.658)
N6: (47.338,140.691,107.988)
N7: (45.549,138.292,108.722)
N9: (46.296,136.787,110.208)
O5': (42.583,135.154,110.427)
O3': (43.965,135.310,113.867)
OP2: (40.654,136.531,109.641)
C3': (44.457,135.591,112.560)
C1': (46.330,135.640,111.114)
C5': (43.148,133.998,111.056)
O4': (45.419,134.665,110.639)
C8: (45.285,137.190,109.377)
O2': (46.700,135.230,113.465)
C6: (47.666,139.712,108.835)
C5: (46.824,138.632,109.144)
C4: (47.302,137.706,110.047)
P: (41.074,135.141,109.936)
C4': (44.464,134.350,111.684)
C2': (45.928,135.987,112.554)
C2: (49.202,138.780,110.285)
N1: (48.873,139.757,109.435)
N3: (48.499,137.719,110.658)
N6: (47.338,140.691,107.988)
N7: (45.549,138.292,108.722)
N9: (46.296,136.787,110.208)
O5': (42.583,135.154,110.427)
O3': (43.965,135.310,113.867)
Image (generated by PyMOL):