Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3LA5:A40:A39
Extra
PDB:
ATOM 1 O3' A A 39 4.674 9.838 8.830 1.00 12.14 O
ATOM 2 P C A 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 3 OP1 C A 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 4 OP2 C A 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 5 O5' C A 40 2.797 11.204 7.898 1.00 11.25 O
ATOM 6 C5' C A 40 3.222 12.537 8.136 1.00 10.79 C
ATOM 7 C4' C A 40 3.017 13.355 6.876 1.00 10.33 C
ATOM 8 O4' C A 40 3.831 12.789 5.813 1.00 10.63 O
ATOM 9 C3' C A 40 1.605 13.396 6.318 1.00 14.22 C
ATOM 10 O3' C A 40 0.893 14.473 6.913 1.00 11.32 O
ATOM 11 C2' C A 40 1.886 13.699 4.844 1.00 13.39 C
ATOM 12 O2' C A 40 2.107 15.075 4.635 1.00 10.88 O
ATOM 13 C1' C A 40 3.190 12.970 4.569 1.00 10.23 C
ATOM 14 N1 C A 40 2.975 11.629 3.971 1.00 10.76 N
ATOM 15 C2 C A 40 3.242 11.457 2.611 1.00 9.71 C
ATOM 16 O2 C A 40 3.656 12.433 1.964 1.00 8.38 O
ATOM 17 N3 C A 40 3.043 10.226 2.068 1.00 9.16 N
ATOM 18 C4 C A 40 2.592 9.220 2.836 1.00 11.64 C
ATOM 19 N4 C A 40 2.400 8.004 2.280 1.00 10.81 N
ATOM 20 C5 C A 40 2.321 9.391 4.230 1.00 12.03 C
ATOM 21 C6 C A 40 2.520 10.604 4.751 1.00 11.87 C
ATOM 22 P C A 41 -0.418 14.255 7.802 1.00 14.43 P
ATOM 23 OP1 C A 41 -0.990 12.918 7.506 1.00 15.55 O
ATOM 24 OP2 C A 41 -1.244 15.477 7.710 1.00 14.56 O
ATOM 25 O5' C A 41 0.166 14.136 9.292 1.00 14.76 O
TER
ATOM 1 O3' C B 38 6.872 4.212 7.487 1.00 12.72 O
ATOM 2 P A B 39 5.398 4.752 7.664 1.00 12.78 P
ATOM 3 OP1 A B 39 4.989 4.385 9.034 1.00 16.27 O
ATOM 4 OP2 A B 39 4.547 4.318 6.529 1.00 12.46 O
ATOM 5 O5' A B 39 5.520 6.343 7.536 1.00 15.37 O
ATOM 6 C5' A B 39 6.229 7.068 8.542 1.00 15.21 C
ATOM 7 C4' A B 39 6.488 8.486 8.062 1.00 13.63 C
ATOM 8 O4' A B 39 7.293 8.428 6.863 1.00 13.68 O
ATOM 9 C3' A B 39 5.239 9.253 7.661 1.00 12.79 C
ATOM 10 O3' A B 39 4.674 9.838 8.830 1.00 12.14 O
ATOM 11 C2' A B 39 5.826 10.300 6.726 1.00 12.36 C
ATOM 12 O2' A B 39 6.394 11.386 7.445 1.00 12.30 O
ATOM 13 C1' A B 39 6.902 9.485 6.004 1.00 12.46 C
ATOM 14 N9 A B 39 6.474 8.887 4.732 1.00 11.32 N
ATOM 15 C8 A B 39 6.017 7.614 4.484 1.00 14.05 C
ATOM 16 N7 A B 39 5.720 7.398 3.217 1.00 11.59 N
ATOM 17 C5 A B 39 6.009 8.607 2.599 1.00 10.56 C
ATOM 18 C6 A B 39 5.926 9.046 1.258 1.00 10.69 C
ATOM 19 N6 A B 39 5.490 8.275 0.247 1.00 9.44 N
ATOM 20 N1 A B 39 6.292 10.322 1.010 1.00 10.13 N
ATOM 21 C2 A B 39 6.725 11.088 2.016 1.00 9.64 C
ATOM 22 N3 A B 39 6.848 10.797 3.303 1.00 11.66 N
ATOM 23 C4 A B 39 6.473 9.529 3.526 1.00 12.14 C
ATOM 24 P C B 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 25 OP1 C B 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 26 OP2 C B 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 27 O5' C B 40 2.797 11.204 7.898 1.00 11.25 O
TER
ATOM 2 P C A 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 3 OP1 C A 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 4 OP2 C A 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 5 O5' C A 40 2.797 11.204 7.898 1.00 11.25 O
ATOM 6 C5' C A 40 3.222 12.537 8.136 1.00 10.79 C
ATOM 7 C4' C A 40 3.017 13.355 6.876 1.00 10.33 C
ATOM 8 O4' C A 40 3.831 12.789 5.813 1.00 10.63 O
ATOM 9 C3' C A 40 1.605 13.396 6.318 1.00 14.22 C
ATOM 10 O3' C A 40 0.893 14.473 6.913 1.00 11.32 O
ATOM 11 C2' C A 40 1.886 13.699 4.844 1.00 13.39 C
ATOM 12 O2' C A 40 2.107 15.075 4.635 1.00 10.88 O
ATOM 13 C1' C A 40 3.190 12.970 4.569 1.00 10.23 C
ATOM 14 N1 C A 40 2.975 11.629 3.971 1.00 10.76 N
ATOM 15 C2 C A 40 3.242 11.457 2.611 1.00 9.71 C
ATOM 16 O2 C A 40 3.656 12.433 1.964 1.00 8.38 O
ATOM 17 N3 C A 40 3.043 10.226 2.068 1.00 9.16 N
ATOM 18 C4 C A 40 2.592 9.220 2.836 1.00 11.64 C
ATOM 19 N4 C A 40 2.400 8.004 2.280 1.00 10.81 N
ATOM 20 C5 C A 40 2.321 9.391 4.230 1.00 12.03 C
ATOM 21 C6 C A 40 2.520 10.604 4.751 1.00 11.87 C
ATOM 22 P C A 41 -0.418 14.255 7.802 1.00 14.43 P
ATOM 23 OP1 C A 41 -0.990 12.918 7.506 1.00 15.55 O
ATOM 24 OP2 C A 41 -1.244 15.477 7.710 1.00 14.56 O
ATOM 25 O5' C A 41 0.166 14.136 9.292 1.00 14.76 O
TER
ATOM 1 O3' C B 38 6.872 4.212 7.487 1.00 12.72 O
ATOM 2 P A B 39 5.398 4.752 7.664 1.00 12.78 P
ATOM 3 OP1 A B 39 4.989 4.385 9.034 1.00 16.27 O
ATOM 4 OP2 A B 39 4.547 4.318 6.529 1.00 12.46 O
ATOM 5 O5' A B 39 5.520 6.343 7.536 1.00 15.37 O
ATOM 6 C5' A B 39 6.229 7.068 8.542 1.00 15.21 C
ATOM 7 C4' A B 39 6.488 8.486 8.062 1.00 13.63 C
ATOM 8 O4' A B 39 7.293 8.428 6.863 1.00 13.68 O
ATOM 9 C3' A B 39 5.239 9.253 7.661 1.00 12.79 C
ATOM 10 O3' A B 39 4.674 9.838 8.830 1.00 12.14 O
ATOM 11 C2' A B 39 5.826 10.300 6.726 1.00 12.36 C
ATOM 12 O2' A B 39 6.394 11.386 7.445 1.00 12.30 O
ATOM 13 C1' A B 39 6.902 9.485 6.004 1.00 12.46 C
ATOM 14 N9 A B 39 6.474 8.887 4.732 1.00 11.32 N
ATOM 15 C8 A B 39 6.017 7.614 4.484 1.00 14.05 C
ATOM 16 N7 A B 39 5.720 7.398 3.217 1.00 11.59 N
ATOM 17 C5 A B 39 6.009 8.607 2.599 1.00 10.56 C
ATOM 18 C6 A B 39 5.926 9.046 1.258 1.00 10.69 C
ATOM 19 N6 A B 39 5.490 8.275 0.247 1.00 9.44 N
ATOM 20 N1 A B 39 6.292 10.322 1.010 1.00 10.13 N
ATOM 21 C2 A B 39 6.725 11.088 2.016 1.00 9.64 C
ATOM 22 N3 A B 39 6.848 10.797 3.303 1.00 11.66 N
ATOM 23 C4 A B 39 6.473 9.529 3.526 1.00 12.14 C
ATOM 24 P C B 40 3.106 10.052 8.959 1.00 12.03 P
ATOM 25 OP1 C B 40 2.832 10.537 10.336 1.00 14.20 O
ATOM 26 OP2 C B 40 2.414 8.835 8.448 1.00 14.59 O
ATOM 27 O5' C B 40 2.797 11.204 7.898 1.00 11.25 O
TER
Atoms:
C2: (3.242,11.457,2.611)
OP1: (2.832,10.537,10.336)
OP2: (2.414,8.835,8.448)
C4: (2.592,9.220,2.836)
O5': (2.797,11.204,7.898)
C3': (1.605,13.396,6.318)
C1': (3.190,12.970,4.569)
O4': (3.831,12.789,5.813)
C5': (3.222,12.537,8.136)
P: (3.106,10.052,8.959)
O2: (3.656,12.433,1.964)
C4': (3.017,13.355,6.876)
C2': (1.886,13.699,4.844)
O2': (2.107,15.075,4.635)
N1: (2.975,11.629,3.971)
N3: (3.043,10.226,2.068)
N4: (2.400,8.004,2.280)
C6: (2.520,10.604,4.751)
C5: (2.321,9.391,4.230)
O3': (0.893,14.473,6.913)
OP1: (2.832,10.537,10.336)
OP2: (2.414,8.835,8.448)
C4: (2.592,9.220,2.836)
O5': (2.797,11.204,7.898)
C3': (1.605,13.396,6.318)
C1': (3.190,12.970,4.569)
O4': (3.831,12.789,5.813)
C5': (3.222,12.537,8.136)
P: (3.106,10.052,8.959)
O2: (3.656,12.433,1.964)
C4': (3.017,13.355,6.876)
C2': (1.886,13.699,4.844)
O2': (2.107,15.075,4.635)
N1: (2.975,11.629,3.971)
N3: (3.043,10.226,2.068)
N4: (2.400,8.004,2.280)
C6: (2.520,10.604,4.751)
C5: (2.321,9.391,4.230)
O3': (0.893,14.473,6.913)
OP1: (4.989,4.385,9.034)
OP2: (4.547,4.318,6.529)
C3': (5.239,9.253,7.661)
C1': (6.902,9.485,6.004)
C5': (6.229,7.068,8.542)
O4': (7.293,8.428,6.863)
C8: (6.017,7.614,4.484)
O2': (6.394,11.386,7.445)
C6: (5.926,9.046,1.258)
C5: (6.009,8.607,2.599)
C4: (6.473,9.529,3.526)
P: (5.398,4.752,7.664)
C4': (6.488,8.486,8.062)
C2': (5.826,10.300,6.726)
C2: (6.725,11.088,2.016)
N1: (6.292,10.322,1.010)
N3: (6.848,10.797,3.303)
N6: (5.490,8.275,0.247)
N7: (5.720,7.398,3.217)
N9: (6.474,8.887,4.732)
O5': (5.520,6.343,7.536)
O3': (4.674,9.838,8.830)
OP2: (4.547,4.318,6.529)
C3': (5.239,9.253,7.661)
C1': (6.902,9.485,6.004)
C5': (6.229,7.068,8.542)
O4': (7.293,8.428,6.863)
C8: (6.017,7.614,4.484)
O2': (6.394,11.386,7.445)
C6: (5.926,9.046,1.258)
C5: (6.009,8.607,2.599)
C4: (6.473,9.529,3.526)
P: (5.398,4.752,7.664)
C4': (6.488,8.486,8.062)
C2': (5.826,10.300,6.726)
C2: (6.725,11.088,2.016)
N1: (6.292,10.322,1.010)
N3: (6.848,10.797,3.303)
N6: (5.490,8.275,0.247)
N7: (5.720,7.398,3.217)
N9: (6.474,8.887,4.732)
O5': (5.520,6.343,7.536)
O3': (4.674,9.838,8.830)
Image (generated by PyMOL):