Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01141:01140
Extra
PDB:
ATOM 1 O3' A A1140 72.635 65.955 177.050 1.00127.31 O
ATOM 2 P C A1141 71.133 65.795 176.492 1.00124.80 P
ATOM 3 OP1 C A1141 70.569 64.558 177.083 1.00125.34 O
ATOM 4 OP2 C A1141 71.154 65.958 175.014 1.00124.29 O
ATOM 5 O5' C A1141 70.349 67.033 177.119 1.00123.18 O
ATOM 6 C5' C A1141 70.192 67.181 178.550 1.00119.03 C
ATOM 7 C4' C A1141 69.501 68.490 178.860 1.00116.66 C
ATOM 8 O4' C A1141 70.335 69.594 178.411 1.00115.56 O
ATOM 9 C3' C A1141 68.186 68.694 178.124 1.00115.25 C
ATOM 10 O3' C A1141 67.100 68.047 178.786 1.00113.28 O
ATOM 11 C2' C A1141 68.063 70.213 178.087 1.00114.52 C
ATOM 12 O2' C A1141 67.614 70.772 179.305 1.00114.05 O
ATOM 13 C1' C A1141 69.520 70.621 177.863 1.00113.96 C
ATOM 14 N1 C A1141 69.873 70.792 176.439 1.00112.50 N
ATOM 15 C2 C A1141 69.641 72.030 175.825 1.00111.66 C
ATOM 16 O2 C A1141 69.132 72.948 176.489 1.00110.95 O
ATOM 17 N3 C A1141 69.975 72.194 174.523 1.00111.41 N
ATOM 18 C4 C A1141 70.514 71.181 173.839 1.00111.42 C
ATOM 19 N4 C A1141 70.833 71.386 172.560 1.00111.16 N
ATOM 20 C5 C A1141 70.753 69.911 174.435 1.00111.72 C
ATOM 21 C6 C A1141 70.421 69.761 175.723 1.00112.09 C
ATOM 22 P C A1142 66.618 66.588 178.298 1.00110.25 P
ATOM 23 OP1 C A1142 67.411 66.177 177.108 1.00110.24 O
ATOM 24 OP2 C A1142 65.134 66.589 178.224 1.00110.20 O
ATOM 25 O5' C A1142 67.040 65.652 179.508 1.00109.34 O
TER
ATOM 1 O3' U B1139 77.244 68.173 173.389 1.00133.06 O
ATOM 2 P A B1140 75.697 67.963 172.996 1.00133.26 P
ATOM 3 OP1 A B1140 75.613 66.681 172.249 1.00133.39 O
ATOM 4 OP2 A B1140 75.189 69.211 172.370 1.00133.43 O
ATOM 5 O5' A B1140 74.951 67.788 174.395 1.00132.62 O
ATOM 6 C5' A B1140 75.272 66.691 175.278 1.00132.07 C
ATOM 7 C4' A B1140 74.820 66.999 176.688 1.00130.75 C
ATOM 8 O4' A B1140 75.397 68.269 177.092 1.00130.97 O
ATOM 9 C3' A B1140 73.325 67.193 176.883 1.00129.79 C
ATOM 10 O3' A B1140 72.635 65.955 177.050 1.00127.31 O
ATOM 11 C2' A B1140 73.279 68.068 178.129 1.00130.41 C
ATOM 12 O2' A B1140 73.515 67.354 179.328 1.00130.74 O
ATOM 13 C1' A B1140 74.463 69.000 177.870 1.00130.74 C
ATOM 14 N9 A B1140 74.079 70.192 177.113 1.00131.24 N
ATOM 15 C8 A B1140 74.193 70.407 175.757 1.00131.52 C
ATOM 16 N7 A B1140 73.752 71.578 175.368 1.00131.72 N
ATOM 17 C5 A B1140 73.317 72.177 176.544 1.00131.53 C
ATOM 18 C6 A B1140 72.740 73.431 176.808 1.00131.36 C
ATOM 19 N6 A B1140 72.479 74.343 175.866 1.00130.89 N
ATOM 20 N1 A B1140 72.432 73.719 178.091 1.00131.11 N
ATOM 21 C2 A B1140 72.680 72.801 179.034 1.00130.92 C
ATOM 22 N3 A B1140 73.212 71.589 178.911 1.00130.82 N
ATOM 23 C4 A B1140 73.515 71.335 177.626 1.00131.26 C
ATOM 24 P C B1141 71.133 65.795 176.492 1.00124.80 P
ATOM 25 OP1 C B1141 70.569 64.558 177.083 1.00125.34 O
ATOM 26 OP2 C B1141 71.154 65.958 175.014 1.00124.29 O
ATOM 27 O5' C B1141 70.349 67.033 177.119 1.00123.18 O
TER
ATOM 2 P C A1141 71.133 65.795 176.492 1.00124.80 P
ATOM 3 OP1 C A1141 70.569 64.558 177.083 1.00125.34 O
ATOM 4 OP2 C A1141 71.154 65.958 175.014 1.00124.29 O
ATOM 5 O5' C A1141 70.349 67.033 177.119 1.00123.18 O
ATOM 6 C5' C A1141 70.192 67.181 178.550 1.00119.03 C
ATOM 7 C4' C A1141 69.501 68.490 178.860 1.00116.66 C
ATOM 8 O4' C A1141 70.335 69.594 178.411 1.00115.56 O
ATOM 9 C3' C A1141 68.186 68.694 178.124 1.00115.25 C
ATOM 10 O3' C A1141 67.100 68.047 178.786 1.00113.28 O
ATOM 11 C2' C A1141 68.063 70.213 178.087 1.00114.52 C
ATOM 12 O2' C A1141 67.614 70.772 179.305 1.00114.05 O
ATOM 13 C1' C A1141 69.520 70.621 177.863 1.00113.96 C
ATOM 14 N1 C A1141 69.873 70.792 176.439 1.00112.50 N
ATOM 15 C2 C A1141 69.641 72.030 175.825 1.00111.66 C
ATOM 16 O2 C A1141 69.132 72.948 176.489 1.00110.95 O
ATOM 17 N3 C A1141 69.975 72.194 174.523 1.00111.41 N
ATOM 18 C4 C A1141 70.514 71.181 173.839 1.00111.42 C
ATOM 19 N4 C A1141 70.833 71.386 172.560 1.00111.16 N
ATOM 20 C5 C A1141 70.753 69.911 174.435 1.00111.72 C
ATOM 21 C6 C A1141 70.421 69.761 175.723 1.00112.09 C
ATOM 22 P C A1142 66.618 66.588 178.298 1.00110.25 P
ATOM 23 OP1 C A1142 67.411 66.177 177.108 1.00110.24 O
ATOM 24 OP2 C A1142 65.134 66.589 178.224 1.00110.20 O
ATOM 25 O5' C A1142 67.040 65.652 179.508 1.00109.34 O
TER
ATOM 1 O3' U B1139 77.244 68.173 173.389 1.00133.06 O
ATOM 2 P A B1140 75.697 67.963 172.996 1.00133.26 P
ATOM 3 OP1 A B1140 75.613 66.681 172.249 1.00133.39 O
ATOM 4 OP2 A B1140 75.189 69.211 172.370 1.00133.43 O
ATOM 5 O5' A B1140 74.951 67.788 174.395 1.00132.62 O
ATOM 6 C5' A B1140 75.272 66.691 175.278 1.00132.07 C
ATOM 7 C4' A B1140 74.820 66.999 176.688 1.00130.75 C
ATOM 8 O4' A B1140 75.397 68.269 177.092 1.00130.97 O
ATOM 9 C3' A B1140 73.325 67.193 176.883 1.00129.79 C
ATOM 10 O3' A B1140 72.635 65.955 177.050 1.00127.31 O
ATOM 11 C2' A B1140 73.279 68.068 178.129 1.00130.41 C
ATOM 12 O2' A B1140 73.515 67.354 179.328 1.00130.74 O
ATOM 13 C1' A B1140 74.463 69.000 177.870 1.00130.74 C
ATOM 14 N9 A B1140 74.079 70.192 177.113 1.00131.24 N
ATOM 15 C8 A B1140 74.193 70.407 175.757 1.00131.52 C
ATOM 16 N7 A B1140 73.752 71.578 175.368 1.00131.72 N
ATOM 17 C5 A B1140 73.317 72.177 176.544 1.00131.53 C
ATOM 18 C6 A B1140 72.740 73.431 176.808 1.00131.36 C
ATOM 19 N6 A B1140 72.479 74.343 175.866 1.00130.89 N
ATOM 20 N1 A B1140 72.432 73.719 178.091 1.00131.11 N
ATOM 21 C2 A B1140 72.680 72.801 179.034 1.00130.92 C
ATOM 22 N3 A B1140 73.212 71.589 178.911 1.00130.82 N
ATOM 23 C4 A B1140 73.515 71.335 177.626 1.00131.26 C
ATOM 24 P C B1141 71.133 65.795 176.492 1.00124.80 P
ATOM 25 OP1 C B1141 70.569 64.558 177.083 1.00125.34 O
ATOM 26 OP2 C B1141 71.154 65.958 175.014 1.00124.29 O
ATOM 27 O5' C B1141 70.349 67.033 177.119 1.00123.18 O
TER
Atoms:
C2: (69.641,72.030,175.825)
OP1: (70.569,64.558,177.083)
OP2: (71.154,65.958,175.014)
C4: (70.514,71.181,173.839)
O5': (70.349,67.033,177.119)
C3': (68.186,68.694,178.124)
C1': (69.520,70.621,177.863)
O4': (70.335,69.594,178.411)
C5': (70.192,67.181,178.550)
P: (71.133,65.795,176.492)
O2: (69.132,72.948,176.489)
C4': (69.501,68.490,178.860)
C2': (68.063,70.213,178.087)
O2': (67.614,70.772,179.305)
N1: (69.873,70.792,176.439)
N3: (69.975,72.194,174.523)
N4: (70.833,71.386,172.560)
C6: (70.421,69.761,175.723)
C5: (70.753,69.911,174.435)
O3': (67.100,68.047,178.786)
OP1: (70.569,64.558,177.083)
OP2: (71.154,65.958,175.014)
C4: (70.514,71.181,173.839)
O5': (70.349,67.033,177.119)
C3': (68.186,68.694,178.124)
C1': (69.520,70.621,177.863)
O4': (70.335,69.594,178.411)
C5': (70.192,67.181,178.550)
P: (71.133,65.795,176.492)
O2: (69.132,72.948,176.489)
C4': (69.501,68.490,178.860)
C2': (68.063,70.213,178.087)
O2': (67.614,70.772,179.305)
N1: (69.873,70.792,176.439)
N3: (69.975,72.194,174.523)
N4: (70.833,71.386,172.560)
C6: (70.421,69.761,175.723)
C5: (70.753,69.911,174.435)
O3': (67.100,68.047,178.786)
OP1: (75.613,66.681,172.249)
OP2: (75.189,69.211,172.370)
C3': (73.325,67.193,176.883)
C1': (74.463,69.000,177.870)
C5': (75.272,66.691,175.278)
O4': (75.397,68.269,177.092)
C8: (74.193,70.407,175.757)
O2': (73.515,67.354,179.328)
C6: (72.740,73.431,176.808)
C5: (73.317,72.177,176.544)
C4: (73.515,71.335,177.626)
P: (75.697,67.963,172.996)
C4': (74.820,66.999,176.688)
C2': (73.279,68.068,178.129)
C2: (72.680,72.801,179.034)
N1: (72.432,73.719,178.091)
N3: (73.212,71.589,178.911)
N6: (72.479,74.343,175.866)
N7: (73.752,71.578,175.368)
N9: (74.079,70.192,177.113)
O5': (74.951,67.788,174.395)
O3': (72.635,65.955,177.050)
OP2: (75.189,69.211,172.370)
C3': (73.325,67.193,176.883)
C1': (74.463,69.000,177.870)
C5': (75.272,66.691,175.278)
O4': (75.397,68.269,177.092)
C8: (74.193,70.407,175.757)
O2': (73.515,67.354,179.328)
C6: (72.740,73.431,176.808)
C5: (73.317,72.177,176.544)
C4: (73.515,71.335,177.626)
P: (75.697,67.963,172.996)
C4': (74.820,66.999,176.688)
C2': (73.279,68.068,178.129)
C2: (72.680,72.801,179.034)
N1: (72.432,73.719,178.091)
N3: (73.212,71.589,178.911)
N6: (72.479,74.343,175.866)
N7: (73.752,71.578,175.368)
N9: (74.079,70.192,177.113)
O5': (74.951,67.788,174.395)
O3': (72.635,65.955,177.050)
Image (generated by PyMOL):