Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A55:A54
Extra
PDB:
ATOM 1 O3' A A 54 -19.824 21.832 -3.946 1.00 42.90 O
ATOM 2 P C A 55 -18.840 20.628 -3.592 1.00 48.83 P
ATOM 3 OP1 C A 55 -18.816 20.519 -2.117 1.00 46.02 O
ATOM 4 OP2 C A 55 -17.580 20.801 -4.353 1.00 38.33 O
ATOM 5 O5' C A 55 -19.636 19.367 -4.167 1.00 39.14 O
ATOM 6 C5' C A 55 -20.844 18.981 -3.529 1.00 40.67 C
ATOM 7 C4' C A 55 -21.536 17.851 -4.271 1.00 42.49 C
ATOM 8 O4' C A 55 -22.030 18.333 -5.545 1.00 42.95 O
ATOM 9 C3' C A 55 -20.659 16.668 -4.645 1.00 40.43 C
ATOM 10 O3' C A 55 -20.515 15.786 -3.544 1.00 41.18 O
ATOM 11 C2' C A 55 -21.510 16.060 -5.750 1.00 39.88 C
ATOM 12 O2' C A 55 -22.677 15.443 -5.244 1.00 43.81 O
ATOM 13 C1' C A 55 -21.903 17.315 -6.515 1.00 36.89 C
ATOM 14 N1 C A 55 -20.898 17.759 -7.512 1.00 37.94 N
ATOM 15 C2 C A 55 -21.014 17.336 -8.840 1.00 38.69 C
ATOM 16 O2 C A 55 -21.956 16.593 -9.151 1.00 39.40 O
ATOM 17 N3 C A 55 -20.090 17.752 -9.742 1.00 34.94 N
ATOM 18 C4 C A 55 -19.096 18.555 -9.354 1.00 37.86 C
ATOM 19 N4 C A 55 -18.208 18.945 -10.272 1.00 38.73 N
ATOM 20 C5 C A 55 -18.964 18.999 -8.006 1.00 41.15 C
ATOM 21 C6 C A 55 -19.880 18.581 -7.128 1.00 41.19 C
ATOM 22 P G A 56 -19.149 14.973 -3.376 1.00 52.44 P
ATOM 23 OP1 G A 56 -19.221 14.281 -2.070 1.00 50.06 O
ATOM 24 OP2 G A 56 -18.014 15.873 -3.688 1.00 44.43 O
ATOM 25 O5' G A 56 -19.247 13.869 -4.528 1.00 44.86 O
TER
ATOM 1 O3' G B 53 -17.308 26.797 -6.150 1.00 47.74 O
ATOM 2 P A B 54 -16.685 25.344 -5.927 1.00 51.48 P
ATOM 3 OP1 A B 54 -16.131 25.302 -4.554 1.00 45.60 O
ATOM 4 OP2 A B 54 -15.829 25.023 -7.093 1.00 42.27 O
ATOM 5 O5' A B 54 -17.987 24.419 -5.969 1.00 42.01 O
ATOM 6 C5' A B 54 -19.018 24.673 -5.035 1.00 40.00 C
ATOM 7 C4' A B 54 -20.206 23.765 -5.276 1.00 39.07 C
ATOM 8 O4' A B 54 -20.746 23.988 -6.598 1.00 47.47 O
ATOM 9 C3' A B 54 -19.897 22.284 -5.277 1.00 38.86 C
ATOM 10 O3' A B 54 -19.824 21.832 -3.946 1.00 42.90 O
ATOM 11 C2' A B 54 -21.145 21.755 -5.963 1.00 41.98 C
ATOM 12 O2' A B 54 -22.264 21.791 -5.100 1.00 40.30 O
ATOM 13 C1' A B 54 -21.339 22.790 -7.063 1.00 39.57 C
ATOM 14 N9 A B 54 -20.734 22.476 -8.353 1.00 38.40 N
ATOM 15 C8 A B 54 -19.594 23.025 -8.873 1.00 43.41 C
ATOM 16 N7 A B 54 -19.282 22.574 -10.066 1.00 43.36 N
ATOM 17 C5 A B 54 -20.293 21.671 -10.348 1.00 37.53 C
ATOM 18 C6 A B 54 -20.540 20.853 -11.464 1.00 37.21 C
ATOM 19 N6 A B 54 -19.748 20.823 -12.541 1.00 39.14 N
ATOM 20 N1 A B 54 -21.633 20.065 -11.427 1.00 35.89 N
ATOM 21 C2 A B 54 -22.417 20.102 -10.345 1.00 36.10 C
ATOM 22 N3 A B 54 -22.290 20.830 -9.238 1.00 36.77 N
ATOM 23 C4 A B 54 -21.197 21.600 -9.305 1.00 36.15 C
ATOM 24 P C B 55 -18.840 20.628 -3.592 1.00 48.83 P
ATOM 25 OP1 C B 55 -18.816 20.519 -2.117 1.00 46.02 O
ATOM 26 OP2 C B 55 -17.580 20.801 -4.353 1.00 38.33 O
ATOM 27 O5' C B 55 -19.636 19.367 -4.167 1.00 39.14 O
TER
ATOM 2 P C A 55 -18.840 20.628 -3.592 1.00 48.83 P
ATOM 3 OP1 C A 55 -18.816 20.519 -2.117 1.00 46.02 O
ATOM 4 OP2 C A 55 -17.580 20.801 -4.353 1.00 38.33 O
ATOM 5 O5' C A 55 -19.636 19.367 -4.167 1.00 39.14 O
ATOM 6 C5' C A 55 -20.844 18.981 -3.529 1.00 40.67 C
ATOM 7 C4' C A 55 -21.536 17.851 -4.271 1.00 42.49 C
ATOM 8 O4' C A 55 -22.030 18.333 -5.545 1.00 42.95 O
ATOM 9 C3' C A 55 -20.659 16.668 -4.645 1.00 40.43 C
ATOM 10 O3' C A 55 -20.515 15.786 -3.544 1.00 41.18 O
ATOM 11 C2' C A 55 -21.510 16.060 -5.750 1.00 39.88 C
ATOM 12 O2' C A 55 -22.677 15.443 -5.244 1.00 43.81 O
ATOM 13 C1' C A 55 -21.903 17.315 -6.515 1.00 36.89 C
ATOM 14 N1 C A 55 -20.898 17.759 -7.512 1.00 37.94 N
ATOM 15 C2 C A 55 -21.014 17.336 -8.840 1.00 38.69 C
ATOM 16 O2 C A 55 -21.956 16.593 -9.151 1.00 39.40 O
ATOM 17 N3 C A 55 -20.090 17.752 -9.742 1.00 34.94 N
ATOM 18 C4 C A 55 -19.096 18.555 -9.354 1.00 37.86 C
ATOM 19 N4 C A 55 -18.208 18.945 -10.272 1.00 38.73 N
ATOM 20 C5 C A 55 -18.964 18.999 -8.006 1.00 41.15 C
ATOM 21 C6 C A 55 -19.880 18.581 -7.128 1.00 41.19 C
ATOM 22 P G A 56 -19.149 14.973 -3.376 1.00 52.44 P
ATOM 23 OP1 G A 56 -19.221 14.281 -2.070 1.00 50.06 O
ATOM 24 OP2 G A 56 -18.014 15.873 -3.688 1.00 44.43 O
ATOM 25 O5' G A 56 -19.247 13.869 -4.528 1.00 44.86 O
TER
ATOM 1 O3' G B 53 -17.308 26.797 -6.150 1.00 47.74 O
ATOM 2 P A B 54 -16.685 25.344 -5.927 1.00 51.48 P
ATOM 3 OP1 A B 54 -16.131 25.302 -4.554 1.00 45.60 O
ATOM 4 OP2 A B 54 -15.829 25.023 -7.093 1.00 42.27 O
ATOM 5 O5' A B 54 -17.987 24.419 -5.969 1.00 42.01 O
ATOM 6 C5' A B 54 -19.018 24.673 -5.035 1.00 40.00 C
ATOM 7 C4' A B 54 -20.206 23.765 -5.276 1.00 39.07 C
ATOM 8 O4' A B 54 -20.746 23.988 -6.598 1.00 47.47 O
ATOM 9 C3' A B 54 -19.897 22.284 -5.277 1.00 38.86 C
ATOM 10 O3' A B 54 -19.824 21.832 -3.946 1.00 42.90 O
ATOM 11 C2' A B 54 -21.145 21.755 -5.963 1.00 41.98 C
ATOM 12 O2' A B 54 -22.264 21.791 -5.100 1.00 40.30 O
ATOM 13 C1' A B 54 -21.339 22.790 -7.063 1.00 39.57 C
ATOM 14 N9 A B 54 -20.734 22.476 -8.353 1.00 38.40 N
ATOM 15 C8 A B 54 -19.594 23.025 -8.873 1.00 43.41 C
ATOM 16 N7 A B 54 -19.282 22.574 -10.066 1.00 43.36 N
ATOM 17 C5 A B 54 -20.293 21.671 -10.348 1.00 37.53 C
ATOM 18 C6 A B 54 -20.540 20.853 -11.464 1.00 37.21 C
ATOM 19 N6 A B 54 -19.748 20.823 -12.541 1.00 39.14 N
ATOM 20 N1 A B 54 -21.633 20.065 -11.427 1.00 35.89 N
ATOM 21 C2 A B 54 -22.417 20.102 -10.345 1.00 36.10 C
ATOM 22 N3 A B 54 -22.290 20.830 -9.238 1.00 36.77 N
ATOM 23 C4 A B 54 -21.197 21.600 -9.305 1.00 36.15 C
ATOM 24 P C B 55 -18.840 20.628 -3.592 1.00 48.83 P
ATOM 25 OP1 C B 55 -18.816 20.519 -2.117 1.00 46.02 O
ATOM 26 OP2 C B 55 -17.580 20.801 -4.353 1.00 38.33 O
ATOM 27 O5' C B 55 -19.636 19.367 -4.167 1.00 39.14 O
TER
Atoms:
C2: (-21.014,17.336,-8.840)
OP1: (-18.816,20.519,-2.117)
OP2: (-17.580,20.801,-4.353)
C4: (-19.096,18.555,-9.354)
O5': (-19.636,19.367,-4.167)
C3': (-20.659,16.668,-4.645)
C1': (-21.903,17.315,-6.515)
O4': (-22.030,18.333,-5.545)
C5': (-20.844,18.981,-3.529)
P: (-18.840,20.628,-3.592)
O2: (-21.956,16.593,-9.151)
C4': (-21.536,17.851,-4.271)
C2': (-21.510,16.060,-5.750)
O2': (-22.677,15.443,-5.244)
N1: (-20.898,17.759,-7.512)
N3: (-20.090,17.752,-9.742)
N4: (-18.208,18.945,-10.272)
C6: (-19.880,18.581,-7.128)
C5: (-18.964,18.999,-8.006)
O3': (-20.515,15.786,-3.544)
OP1: (-18.816,20.519,-2.117)
OP2: (-17.580,20.801,-4.353)
C4: (-19.096,18.555,-9.354)
O5': (-19.636,19.367,-4.167)
C3': (-20.659,16.668,-4.645)
C1': (-21.903,17.315,-6.515)
O4': (-22.030,18.333,-5.545)
C5': (-20.844,18.981,-3.529)
P: (-18.840,20.628,-3.592)
O2: (-21.956,16.593,-9.151)
C4': (-21.536,17.851,-4.271)
C2': (-21.510,16.060,-5.750)
O2': (-22.677,15.443,-5.244)
N1: (-20.898,17.759,-7.512)
N3: (-20.090,17.752,-9.742)
N4: (-18.208,18.945,-10.272)
C6: (-19.880,18.581,-7.128)
C5: (-18.964,18.999,-8.006)
O3': (-20.515,15.786,-3.544)
OP1: (-16.131,25.302,-4.554)
OP2: (-15.829,25.023,-7.093)
C3': (-19.897,22.284,-5.277)
C1': (-21.339,22.790,-7.063)
C5': (-19.018,24.673,-5.035)
O4': (-20.746,23.988,-6.598)
C8: (-19.594,23.025,-8.873)
O2': (-22.264,21.791,-5.100)
C6: (-20.540,20.853,-11.464)
C5: (-20.293,21.671,-10.348)
C4: (-21.197,21.600,-9.305)
P: (-16.685,25.344,-5.927)
C4': (-20.206,23.765,-5.276)
C2': (-21.145,21.755,-5.963)
C2: (-22.417,20.102,-10.345)
N1: (-21.633,20.065,-11.427)
N3: (-22.290,20.830,-9.238)
N6: (-19.748,20.823,-12.541)
N7: (-19.282,22.574,-10.066)
N9: (-20.734,22.476,-8.353)
O5': (-17.987,24.419,-5.969)
O3': (-19.824,21.832,-3.946)
OP2: (-15.829,25.023,-7.093)
C3': (-19.897,22.284,-5.277)
C1': (-21.339,22.790,-7.063)
C5': (-19.018,24.673,-5.035)
O4': (-20.746,23.988,-6.598)
C8: (-19.594,23.025,-8.873)
O2': (-22.264,21.791,-5.100)
C6: (-20.540,20.853,-11.464)
C5: (-20.293,21.671,-10.348)
C4: (-21.197,21.600,-9.305)
P: (-16.685,25.344,-5.927)
C4': (-20.206,23.765,-5.276)
C2': (-21.145,21.755,-5.963)
C2: (-22.417,20.102,-10.345)
N1: (-21.633,20.065,-11.427)
N3: (-22.290,20.830,-9.238)
N6: (-19.748,20.823,-12.541)
N7: (-19.282,22.574,-10.066)
N9: (-20.734,22.476,-8.353)
O5': (-17.987,24.419,-5.969)
O3': (-19.824,21.832,-3.946)
Image (generated by PyMOL):