ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:0497:0493

Extra

PDB:
ATOM 1 O3' A A 496 14.170 152.470 62.472 1.00 62.24 O
ATOM 2 P A A 497 14.189 153.908 63.185 1.00 63.21 P
ATOM 3 OP1 A A 497 13.452 153.764 64.464 1.00 65.49 O
ATOM 4 OP2 A A 497 13.794 154.965 62.223 1.00 61.98 O
ATOM 5 O5' A A 497 15.709 154.117 63.596 1.00 65.18 O
ATOM 6 C5' A A 497 16.714 154.271 62.607 1.00 65.52 C
ATOM 7 C4' A A 497 18.068 154.117 63.229 1.00 66.23 C
ATOM 8 O4' A A 497 19.069 154.286 62.200 1.00 67.46 O
ATOM 9 C3' A A 497 18.423 155.116 64.319 1.00 67.48 C
ATOM 10 O3' A A 497 19.328 154.539 65.247 1.00 72.13 O
ATOM 11 C2' A A 497 19.071 156.255 63.546 1.00 66.98 C
ATOM 12 O2' A A 497 20.074 156.895 64.306 1.00 66.17 O
ATOM 13 C1' A A 497 19.686 155.547 62.335 1.00 66.75 C
ATOM 14 N9 A A 497 19.470 156.285 61.087 1.00 66.29 N
ATOM 15 C8 A A 497 18.454 157.162 60.789 1.00 66.18 C
ATOM 16 N7 A A 497 18.566 157.719 59.609 1.00 67.22 N
ATOM 17 C5 A A 497 19.724 157.162 59.086 1.00 66.38 C
ATOM 18 C6 A A 497 20.399 157.352 57.868 1.00 65.24 C
ATOM 19 N6 A A 497 20.001 158.193 56.919 1.00 65.79 N
ATOM 20 N1 A A 497 21.518 156.638 57.656 1.00 66.05 N
ATOM 21 C2 A A 497 21.929 155.795 58.606 1.00 66.84 C
ATOM 22 N3 A A 497 21.388 155.531 59.791 1.00 66.81 N
ATOM 23 C4 A A 497 20.277 156.260 59.976 1.00 66.41 C
ATOM 24 P U A 498 19.087 154.735 66.825 1.00 73.13 P
ATOM 25 OP1 U A 498 17.644 154.512 67.107 1.00 73.09 O
ATOM 26 OP2 U A 498 19.728 155.995 67.258 1.00 74.07 O
ATOM 27 O5' U A 498 19.897 153.535 67.485 1.00 77.52 O
TER

ATOM 1 O3' G B 492 12.378 165.834 57.523 1.00 61.62 O
ATOM 2 P C B 493 11.757 164.385 57.208 1.00 59.83 P
ATOM 3 OP1 C B 493 10.704 164.586 56.179 1.00 63.46 O
ATOM 4 OP2 C B 493 11.413 163.715 58.486 1.00 61.01 O
ATOM 5 O5' C B 493 12.953 163.595 56.518 1.00 60.26 O
ATOM 6 C5' C B 493 13.524 164.069 55.290 1.00 60.73 C
ATOM 7 C4' C B 493 14.604 163.133 54.815 1.00 60.91 C
ATOM 8 O4' C B 493 15.688 163.114 55.774 1.00 61.71 O
ATOM 9 C3' C B 493 14.196 161.681 54.669 1.00 60.40 C
ATOM 10 O3' C B 493 13.568 161.479 53.409 1.00 60.58 O
ATOM 11 C2' C B 493 15.536 160.962 54.778 1.00 60.98 C
ATOM 12 O2' C B 493 16.291 161.018 53.580 1.00 59.02 O
ATOM 13 C1' C B 493 16.243 161.812 55.838 1.00 60.60 C
ATOM 14 N1 C B 493 16.116 161.324 57.223 1.00 60.53 N
ATOM 15 C2 C B 493 16.933 160.276 57.650 1.00 61.02 C
ATOM 16 O2 C B 493 17.721 159.767 56.848 1.00 63.87 O
ATOM 17 N3 C B 493 16.846 159.845 58.927 1.00 60.66 N
ATOM 18 C4 C B 493 15.989 160.426 59.768 1.00 61.04 C
ATOM 19 N4 C B 493 15.954 159.990 61.026 1.00 62.53 N
ATOM 20 C5 C B 493 15.132 161.487 59.358 1.00 61.08 C
ATOM 21 C6 C B 493 15.224 161.897 58.089 1.00 61.70 C
ATOM 22 P G B 494 12.210 160.630 53.313 1.00 59.24 P
ATOM 23 OP1 G B 494 11.747 160.781 51.918 1.00 60.61 O
ATOM 24 OP2 G B 494 11.306 160.998 54.435 1.00 58.38 O
ATOM 25 O5' G B 494 12.670 159.119 53.493 1.00 60.72 O
TER

Atoms:
OP1: (13.452,153.764,64.464)
OP2: (13.794,154.965,62.223)
C3': (18.423,155.116,64.319)
C1': (19.686,155.547,62.335)
C5': (16.714,154.271,62.607)
O4': (19.069,154.286,62.200)
C8: (18.454,157.162,60.789)
O2': (20.074,156.895,64.306)
C6: (20.399,157.352,57.868)
C5: (19.724,157.162,59.086)
C4: (20.277,156.260,59.976)
P: (14.189,153.908,63.185)
C4': (18.068,154.117,63.229)
C2': (19.071,156.255,63.546)
C2: (21.929,155.795,58.606)
N1: (21.518,156.638,57.656)
N3: (21.388,155.531,59.791)
N6: (20.001,158.193,56.919)
N7: (18.566,157.719,59.609)
N9: (19.470,156.285,61.087)
O5': (15.709,154.117,63.596)
O3': (19.328,154.539,65.247)
C2: (16.933,160.276,57.650)
OP1: (10.704,164.586,56.179)
OP2: (11.413,163.715,58.486)
C4: (15.989,160.426,59.768)
O5': (12.953,163.595,56.518)
C3': (14.196,161.681,54.669)
C1': (16.243,161.812,55.838)
O4': (15.688,163.114,55.774)
C5': (13.524,164.069,55.290)
P: (11.757,164.385,57.208)
O2: (17.721,159.767,56.848)
C4': (14.604,163.133,54.815)
C2': (15.536,160.962,54.778)
O2': (16.291,161.018,53.580)
N1: (16.116,161.324,57.223)
N3: (16.846,159.845,58.927)
N4: (15.954,159.990,61.026)
C6: (15.224,161.897,58.089)
C5: (15.132,161.487,59.358)
O3': (13.568,161.479,53.409)
Image (generated by PyMOL):
PyMOL image
show in jmol