Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0978:0977
Extra
PDB:
ATOM 1 O3' A A 977 42.809 64.070 86.785 1.00 44.90 O
ATOM 2 P C A 978 41.316 64.326 86.268 1.00 46.21 P
ATOM 3 OP1 C A 978 41.408 64.831 84.875 1.00 45.60 O
ATOM 4 OP2 C A 978 40.613 65.136 87.294 1.00 47.18 O
ATOM 5 O5' C A 978 40.671 62.870 86.255 1.00 47.05 O
ATOM 6 C5' C A 978 41.217 61.833 85.421 1.00 48.21 C
ATOM 7 C4' C A 978 40.667 60.482 85.820 1.00 48.54 C
ATOM 8 O4' C A 978 41.082 60.169 87.172 1.00 47.70 O
ATOM 9 C3' C A 978 39.155 60.339 85.865 1.00 49.57 C
ATOM 10 O3' C A 978 38.606 60.112 84.577 1.00 51.71 O
ATOM 11 C2' C A 978 38.985 59.125 86.765 1.00 49.67 C
ATOM 12 O2' C A 978 39.220 57.896 86.105 1.00 51.37 O
ATOM 13 C1' C A 978 40.095 59.362 87.790 1.00 48.54 C
ATOM 14 N1 C A 978 39.591 60.044 88.993 1.00 47.74 N
ATOM 15 C2 C A 978 38.936 59.276 89.964 1.00 48.44 C
ATOM 16 O2 C A 978 38.832 58.048 89.796 1.00 48.98 O
ATOM 17 N3 C A 978 38.432 59.883 91.055 1.00 47.83 N
ATOM 18 C4 C A 978 38.563 61.195 91.205 1.00 47.08 C
ATOM 19 N4 C A 978 38.029 61.746 92.298 1.00 48.28 N
ATOM 20 C5 C A 978 39.241 62.002 90.243 1.00 46.52 C
ATOM 21 C6 C A 978 39.735 61.391 89.164 1.00 45.76 C
ATOM 22 P A A 979 37.064 60.462 84.292 1.00 55.57 P
ATOM 23 OP1 A A 979 36.854 60.133 82.858 1.00 53.97 O
ATOM 24 OP2 A A 979 36.789 61.837 84.777 1.00 55.04 O
ATOM 25 O5' A A 979 36.241 59.432 85.193 1.00 55.25 O
TER
ATOM 1 O3' U B 976 43.768 67.882 91.420 1.00 38.04 O
ATOM 2 P A B 977 42.555 67.273 90.557 1.00 40.50 P
ATOM 3 OP1 A B 977 42.435 68.106 89.328 1.00 43.30 O
ATOM 4 OP2 A B 977 41.381 67.103 91.441 1.00 40.66 O
ATOM 5 O5' A B 977 43.083 65.843 90.091 1.00 41.30 O
ATOM 6 C5' A B 977 44.173 65.746 89.150 1.00 43.35 C
ATOM 7 C4' A B 977 44.311 64.339 88.636 1.00 43.80 C
ATOM 8 O4' A B 977 44.770 63.471 89.696 1.00 45.96 O
ATOM 9 C3' A B 977 43.029 63.715 88.137 1.00 44.46 C
ATOM 10 O3' A B 977 42.809 64.070 86.785 1.00 44.90 O
ATOM 11 C2' A B 977 43.299 62.232 88.326 1.00 47.26 C
ATOM 12 O2' A B 977 44.122 61.682 87.316 1.00 49.57 O
ATOM 13 C1' A B 977 44.070 62.245 89.645 1.00 47.04 C
ATOM 14 N9 A B 977 43.188 62.200 90.809 1.00 48.56 N
ATOM 15 C8 A B 977 42.747 63.261 91.558 1.00 49.09 C
ATOM 16 N7 A B 977 41.962 62.921 92.545 1.00 49.09 N
ATOM 17 C5 A B 977 41.875 61.544 92.438 1.00 49.38 C
ATOM 18 C6 A B 977 41.183 60.590 93.188 1.00 50.59 C
ATOM 19 N6 A B 977 40.415 60.893 94.242 1.00 50.60 N
ATOM 20 N1 A B 977 41.307 59.296 92.819 1.00 52.08 N
ATOM 21 C2 A B 977 42.080 58.999 91.764 1.00 51.32 C
ATOM 22 N3 A B 977 42.779 59.811 90.981 1.00 49.64 N
ATOM 23 C4 A B 977 42.629 61.085 91.375 1.00 48.96 C
ATOM 24 P C B 978 41.316 64.326 86.268 1.00 46.21 P
ATOM 25 OP1 C B 978 41.408 64.831 84.875 1.00 45.60 O
ATOM 26 OP2 C B 978 40.613 65.136 87.294 1.00 47.18 O
ATOM 27 O5' C B 978 40.671 62.870 86.255 1.00 47.05 O
TER
ATOM 2 P C A 978 41.316 64.326 86.268 1.00 46.21 P
ATOM 3 OP1 C A 978 41.408 64.831 84.875 1.00 45.60 O
ATOM 4 OP2 C A 978 40.613 65.136 87.294 1.00 47.18 O
ATOM 5 O5' C A 978 40.671 62.870 86.255 1.00 47.05 O
ATOM 6 C5' C A 978 41.217 61.833 85.421 1.00 48.21 C
ATOM 7 C4' C A 978 40.667 60.482 85.820 1.00 48.54 C
ATOM 8 O4' C A 978 41.082 60.169 87.172 1.00 47.70 O
ATOM 9 C3' C A 978 39.155 60.339 85.865 1.00 49.57 C
ATOM 10 O3' C A 978 38.606 60.112 84.577 1.00 51.71 O
ATOM 11 C2' C A 978 38.985 59.125 86.765 1.00 49.67 C
ATOM 12 O2' C A 978 39.220 57.896 86.105 1.00 51.37 O
ATOM 13 C1' C A 978 40.095 59.362 87.790 1.00 48.54 C
ATOM 14 N1 C A 978 39.591 60.044 88.993 1.00 47.74 N
ATOM 15 C2 C A 978 38.936 59.276 89.964 1.00 48.44 C
ATOM 16 O2 C A 978 38.832 58.048 89.796 1.00 48.98 O
ATOM 17 N3 C A 978 38.432 59.883 91.055 1.00 47.83 N
ATOM 18 C4 C A 978 38.563 61.195 91.205 1.00 47.08 C
ATOM 19 N4 C A 978 38.029 61.746 92.298 1.00 48.28 N
ATOM 20 C5 C A 978 39.241 62.002 90.243 1.00 46.52 C
ATOM 21 C6 C A 978 39.735 61.391 89.164 1.00 45.76 C
ATOM 22 P A A 979 37.064 60.462 84.292 1.00 55.57 P
ATOM 23 OP1 A A 979 36.854 60.133 82.858 1.00 53.97 O
ATOM 24 OP2 A A 979 36.789 61.837 84.777 1.00 55.04 O
ATOM 25 O5' A A 979 36.241 59.432 85.193 1.00 55.25 O
TER
ATOM 1 O3' U B 976 43.768 67.882 91.420 1.00 38.04 O
ATOM 2 P A B 977 42.555 67.273 90.557 1.00 40.50 P
ATOM 3 OP1 A B 977 42.435 68.106 89.328 1.00 43.30 O
ATOM 4 OP2 A B 977 41.381 67.103 91.441 1.00 40.66 O
ATOM 5 O5' A B 977 43.083 65.843 90.091 1.00 41.30 O
ATOM 6 C5' A B 977 44.173 65.746 89.150 1.00 43.35 C
ATOM 7 C4' A B 977 44.311 64.339 88.636 1.00 43.80 C
ATOM 8 O4' A B 977 44.770 63.471 89.696 1.00 45.96 O
ATOM 9 C3' A B 977 43.029 63.715 88.137 1.00 44.46 C
ATOM 10 O3' A B 977 42.809 64.070 86.785 1.00 44.90 O
ATOM 11 C2' A B 977 43.299 62.232 88.326 1.00 47.26 C
ATOM 12 O2' A B 977 44.122 61.682 87.316 1.00 49.57 O
ATOM 13 C1' A B 977 44.070 62.245 89.645 1.00 47.04 C
ATOM 14 N9 A B 977 43.188 62.200 90.809 1.00 48.56 N
ATOM 15 C8 A B 977 42.747 63.261 91.558 1.00 49.09 C
ATOM 16 N7 A B 977 41.962 62.921 92.545 1.00 49.09 N
ATOM 17 C5 A B 977 41.875 61.544 92.438 1.00 49.38 C
ATOM 18 C6 A B 977 41.183 60.590 93.188 1.00 50.59 C
ATOM 19 N6 A B 977 40.415 60.893 94.242 1.00 50.60 N
ATOM 20 N1 A B 977 41.307 59.296 92.819 1.00 52.08 N
ATOM 21 C2 A B 977 42.080 58.999 91.764 1.00 51.32 C
ATOM 22 N3 A B 977 42.779 59.811 90.981 1.00 49.64 N
ATOM 23 C4 A B 977 42.629 61.085 91.375 1.00 48.96 C
ATOM 24 P C B 978 41.316 64.326 86.268 1.00 46.21 P
ATOM 25 OP1 C B 978 41.408 64.831 84.875 1.00 45.60 O
ATOM 26 OP2 C B 978 40.613 65.136 87.294 1.00 47.18 O
ATOM 27 O5' C B 978 40.671 62.870 86.255 1.00 47.05 O
TER
Atoms:
C2: (38.936,59.276,89.964)
OP1: (41.408,64.831,84.875)
OP2: (40.613,65.136,87.294)
C4: (38.563,61.195,91.205)
O5': (40.671,62.870,86.255)
C3': (39.155,60.339,85.865)
C1': (40.095,59.362,87.790)
O4': (41.082,60.169,87.172)
C5': (41.217,61.833,85.421)
P: (41.316,64.326,86.268)
O2: (38.832,58.048,89.796)
C4': (40.667,60.482,85.820)
C2': (38.985,59.125,86.765)
O2': (39.220,57.896,86.105)
N1: (39.591,60.044,88.993)
N3: (38.432,59.883,91.055)
N4: (38.029,61.746,92.298)
C6: (39.735,61.391,89.164)
C5: (39.241,62.002,90.243)
O3': (38.606,60.112,84.577)
OP1: (41.408,64.831,84.875)
OP2: (40.613,65.136,87.294)
C4: (38.563,61.195,91.205)
O5': (40.671,62.870,86.255)
C3': (39.155,60.339,85.865)
C1': (40.095,59.362,87.790)
O4': (41.082,60.169,87.172)
C5': (41.217,61.833,85.421)
P: (41.316,64.326,86.268)
O2: (38.832,58.048,89.796)
C4': (40.667,60.482,85.820)
C2': (38.985,59.125,86.765)
O2': (39.220,57.896,86.105)
N1: (39.591,60.044,88.993)
N3: (38.432,59.883,91.055)
N4: (38.029,61.746,92.298)
C6: (39.735,61.391,89.164)
C5: (39.241,62.002,90.243)
O3': (38.606,60.112,84.577)
OP1: (42.435,68.106,89.328)
OP2: (41.381,67.103,91.441)
C3': (43.029,63.715,88.137)
C1': (44.070,62.245,89.645)
C5': (44.173,65.746,89.150)
O4': (44.770,63.471,89.696)
C8: (42.747,63.261,91.558)
O2': (44.122,61.682,87.316)
C6: (41.183,60.590,93.188)
C5: (41.875,61.544,92.438)
C4: (42.629,61.085,91.375)
P: (42.555,67.273,90.557)
C4': (44.311,64.339,88.636)
C2': (43.299,62.232,88.326)
C2: (42.080,58.999,91.764)
N1: (41.307,59.296,92.819)
N3: (42.779,59.811,90.981)
N6: (40.415,60.893,94.242)
N7: (41.962,62.921,92.545)
N9: (43.188,62.200,90.809)
O5': (43.083,65.843,90.091)
O3': (42.809,64.070,86.785)
OP2: (41.381,67.103,91.441)
C3': (43.029,63.715,88.137)
C1': (44.070,62.245,89.645)
C5': (44.173,65.746,89.150)
O4': (44.770,63.471,89.696)
C8: (42.747,63.261,91.558)
O2': (44.122,61.682,87.316)
C6: (41.183,60.590,93.188)
C5: (41.875,61.544,92.438)
C4: (42.629,61.085,91.375)
P: (42.555,67.273,90.557)
C4': (44.311,64.339,88.636)
C2': (43.299,62.232,88.326)
C2: (42.080,58.999,91.764)
N1: (41.307,59.296,92.819)
N3: (42.779,59.811,90.981)
N6: (40.415,60.893,94.242)
N7: (41.962,62.921,92.545)
N9: (43.188,62.200,90.809)
O5': (43.083,65.843,90.091)
O3': (42.809,64.070,86.785)
Image (generated by PyMOL):