Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A2506:A2505
Extra
PDB:
ATOM 1 O3' A A2505 85.889 -37.028 -14.308 1.00 45.91 O
ATOM 2 P C A2506 85.585 -37.786 -12.900 1.00 54.79 P
ATOM 3 OP1 C A2506 86.191 -39.137 -13.019 1.00 59.64 O
ATOM 4 OP2 C A2506 84.140 -37.675 -12.560 1.00 37.72 O
ATOM 5 O5' C A2506 86.378 -36.914 -11.803 1.00 50.79 O
ATOM 6 C5' C A2506 87.764 -37.168 -11.491 1.00 53.61 C
ATOM 7 C4' C A2506 88.262 -36.219 -10.406 1.00 51.59 C
ATOM 8 O4' C A2506 88.146 -34.852 -10.865 1.00 43.19 O
ATOM 9 C3' C A2506 87.493 -36.234 -9.098 1.00 48.80 C
ATOM 10 O3' C A2506 87.927 -37.245 -8.221 1.00 50.78 O
ATOM 11 C2' C A2506 87.738 -34.847 -8.521 1.00 48.25 C
ATOM 12 O2' C A2506 88.930 -34.705 -7.777 1.00 52.76 O
ATOM 13 C1' C A2506 87.782 -34.002 -9.788 1.00 45.50 C
ATOM 14 N1 C A2506 86.454 -33.437 -10.090 1.00 51.92 N
ATOM 15 C2 C A2506 86.117 -32.153 -9.611 1.00 48.73 C
ATOM 16 O2 C A2506 86.929 -31.526 -8.913 1.00 45.09 O
ATOM 17 N3 C A2506 84.905 -31.638 -9.922 1.00 49.62 N
ATOM 18 C4 C A2506 84.046 -32.342 -10.668 1.00 45.58 C
ATOM 19 N4 C A2506 82.884 -31.783 -10.984 1.00 41.08 N
ATOM 20 C5 C A2506 84.350 -33.650 -11.138 1.00 53.49 C
ATOM 21 C6 C A2506 85.551 -34.154 -10.833 1.00 56.24 C
ATOM 22 P A A2507 86.878 -37.899 -7.213 1.00 54.14 P
ATOM 23 OP1 A A2507 85.973 -38.788 -7.994 1.00 60.16 O
ATOM 24 OP2 A A2507 86.290 -36.785 -6.412 1.00 56.23 O
ATOM 25 O5' A A2507 87.799 -38.818 -6.287 1.00 53.69 O
TER
ATOM 1 O3' G B2504 81.452 -36.230 -18.555 1.00 30.74 O
ATOM 2 P A B2505 81.382 -36.788 -17.047 1.00 35.47 P
ATOM 3 OP1 A B2505 81.619 -38.262 -17.106 1.00 34.38 O
ATOM 4 OP2 A B2505 80.132 -36.269 -16.408 1.00 31.34 O
ATOM 5 O5' A B2505 82.675 -36.114 -16.388 1.00 34.05 O
ATOM 6 C5' A B2505 83.977 -36.423 -16.907 1.00 38.90 C
ATOM 7 C4' A B2505 85.058 -35.667 -16.173 1.00 33.94 C
ATOM 8 O4' A B2505 84.847 -34.248 -16.346 1.00 42.57 O
ATOM 9 C3' A B2505 85.158 -35.849 -14.668 1.00 38.74 C
ATOM 10 O3' A B2505 85.889 -37.028 -14.308 1.00 45.91 O
ATOM 11 C2' A B2505 85.899 -34.589 -14.234 1.00 41.02 C
ATOM 12 O2' A B2505 87.284 -34.738 -14.367 1.00 51.29 O
ATOM 13 C1' A B2505 85.446 -33.562 -15.270 1.00 45.08 C
ATOM 14 N9 A B2505 84.524 -32.541 -14.768 1.00 44.44 N
ATOM 15 C8 A B2505 83.153 -32.488 -14.821 1.00 41.36 C
ATOM 16 N7 A B2505 82.648 -31.404 -14.289 1.00 43.50 N
ATOM 17 C5 A B2505 83.761 -30.694 -13.861 1.00 45.53 C
ATOM 18 C6 A B2505 83.912 -29.429 -13.239 1.00 48.04 C
ATOM 19 N6 A B2505 82.895 -28.607 -12.929 1.00 43.72 N
ATOM 20 N1 A B2505 85.172 -29.025 -12.952 1.00 51.70 N
ATOM 21 C2 A B2505 86.196 -29.827 -13.270 1.00 50.48 C
ATOM 22 N3 A B2505 86.180 -31.015 -13.861 1.00 52.60 N
ATOM 23 C4 A B2505 84.920 -31.393 -14.137 1.00 46.12 C
ATOM 24 P C B2506 85.585 -37.786 -12.900 1.00 54.79 P
ATOM 25 OP1 C B2506 86.191 -39.137 -13.019 1.00 59.64 O
ATOM 26 OP2 C B2506 84.140 -37.675 -12.560 1.00 37.72 O
ATOM 27 O5' C B2506 86.378 -36.914 -11.803 1.00 50.79 O
TER
ATOM 2 P C A2506 85.585 -37.786 -12.900 1.00 54.79 P
ATOM 3 OP1 C A2506 86.191 -39.137 -13.019 1.00 59.64 O
ATOM 4 OP2 C A2506 84.140 -37.675 -12.560 1.00 37.72 O
ATOM 5 O5' C A2506 86.378 -36.914 -11.803 1.00 50.79 O
ATOM 6 C5' C A2506 87.764 -37.168 -11.491 1.00 53.61 C
ATOM 7 C4' C A2506 88.262 -36.219 -10.406 1.00 51.59 C
ATOM 8 O4' C A2506 88.146 -34.852 -10.865 1.00 43.19 O
ATOM 9 C3' C A2506 87.493 -36.234 -9.098 1.00 48.80 C
ATOM 10 O3' C A2506 87.927 -37.245 -8.221 1.00 50.78 O
ATOM 11 C2' C A2506 87.738 -34.847 -8.521 1.00 48.25 C
ATOM 12 O2' C A2506 88.930 -34.705 -7.777 1.00 52.76 O
ATOM 13 C1' C A2506 87.782 -34.002 -9.788 1.00 45.50 C
ATOM 14 N1 C A2506 86.454 -33.437 -10.090 1.00 51.92 N
ATOM 15 C2 C A2506 86.117 -32.153 -9.611 1.00 48.73 C
ATOM 16 O2 C A2506 86.929 -31.526 -8.913 1.00 45.09 O
ATOM 17 N3 C A2506 84.905 -31.638 -9.922 1.00 49.62 N
ATOM 18 C4 C A2506 84.046 -32.342 -10.668 1.00 45.58 C
ATOM 19 N4 C A2506 82.884 -31.783 -10.984 1.00 41.08 N
ATOM 20 C5 C A2506 84.350 -33.650 -11.138 1.00 53.49 C
ATOM 21 C6 C A2506 85.551 -34.154 -10.833 1.00 56.24 C
ATOM 22 P A A2507 86.878 -37.899 -7.213 1.00 54.14 P
ATOM 23 OP1 A A2507 85.973 -38.788 -7.994 1.00 60.16 O
ATOM 24 OP2 A A2507 86.290 -36.785 -6.412 1.00 56.23 O
ATOM 25 O5' A A2507 87.799 -38.818 -6.287 1.00 53.69 O
TER
ATOM 1 O3' G B2504 81.452 -36.230 -18.555 1.00 30.74 O
ATOM 2 P A B2505 81.382 -36.788 -17.047 1.00 35.47 P
ATOM 3 OP1 A B2505 81.619 -38.262 -17.106 1.00 34.38 O
ATOM 4 OP2 A B2505 80.132 -36.269 -16.408 1.00 31.34 O
ATOM 5 O5' A B2505 82.675 -36.114 -16.388 1.00 34.05 O
ATOM 6 C5' A B2505 83.977 -36.423 -16.907 1.00 38.90 C
ATOM 7 C4' A B2505 85.058 -35.667 -16.173 1.00 33.94 C
ATOM 8 O4' A B2505 84.847 -34.248 -16.346 1.00 42.57 O
ATOM 9 C3' A B2505 85.158 -35.849 -14.668 1.00 38.74 C
ATOM 10 O3' A B2505 85.889 -37.028 -14.308 1.00 45.91 O
ATOM 11 C2' A B2505 85.899 -34.589 -14.234 1.00 41.02 C
ATOM 12 O2' A B2505 87.284 -34.738 -14.367 1.00 51.29 O
ATOM 13 C1' A B2505 85.446 -33.562 -15.270 1.00 45.08 C
ATOM 14 N9 A B2505 84.524 -32.541 -14.768 1.00 44.44 N
ATOM 15 C8 A B2505 83.153 -32.488 -14.821 1.00 41.36 C
ATOM 16 N7 A B2505 82.648 -31.404 -14.289 1.00 43.50 N
ATOM 17 C5 A B2505 83.761 -30.694 -13.861 1.00 45.53 C
ATOM 18 C6 A B2505 83.912 -29.429 -13.239 1.00 48.04 C
ATOM 19 N6 A B2505 82.895 -28.607 -12.929 1.00 43.72 N
ATOM 20 N1 A B2505 85.172 -29.025 -12.952 1.00 51.70 N
ATOM 21 C2 A B2505 86.196 -29.827 -13.270 1.00 50.48 C
ATOM 22 N3 A B2505 86.180 -31.015 -13.861 1.00 52.60 N
ATOM 23 C4 A B2505 84.920 -31.393 -14.137 1.00 46.12 C
ATOM 24 P C B2506 85.585 -37.786 -12.900 1.00 54.79 P
ATOM 25 OP1 C B2506 86.191 -39.137 -13.019 1.00 59.64 O
ATOM 26 OP2 C B2506 84.140 -37.675 -12.560 1.00 37.72 O
ATOM 27 O5' C B2506 86.378 -36.914 -11.803 1.00 50.79 O
TER
Atoms:
C2: (86.117,-32.153,-9.611)
OP1: (86.191,-39.137,-13.019)
OP2: (84.140,-37.675,-12.560)
C4: (84.046,-32.342,-10.668)
O5': (86.378,-36.914,-11.803)
C3': (87.493,-36.234,-9.098)
C1': (87.782,-34.002,-9.788)
O4': (88.146,-34.852,-10.865)
C5': (87.764,-37.168,-11.491)
P: (85.585,-37.786,-12.900)
O2: (86.929,-31.526,-8.913)
C4': (88.262,-36.219,-10.406)
C2': (87.738,-34.847,-8.521)
O2': (88.930,-34.705,-7.777)
N1: (86.454,-33.437,-10.090)
N3: (84.905,-31.638,-9.922)
N4: (82.884,-31.783,-10.984)
C6: (85.551,-34.154,-10.833)
C5: (84.350,-33.650,-11.138)
O3': (87.927,-37.245,-8.221)
OP1: (86.191,-39.137,-13.019)
OP2: (84.140,-37.675,-12.560)
C4: (84.046,-32.342,-10.668)
O5': (86.378,-36.914,-11.803)
C3': (87.493,-36.234,-9.098)
C1': (87.782,-34.002,-9.788)
O4': (88.146,-34.852,-10.865)
C5': (87.764,-37.168,-11.491)
P: (85.585,-37.786,-12.900)
O2: (86.929,-31.526,-8.913)
C4': (88.262,-36.219,-10.406)
C2': (87.738,-34.847,-8.521)
O2': (88.930,-34.705,-7.777)
N1: (86.454,-33.437,-10.090)
N3: (84.905,-31.638,-9.922)
N4: (82.884,-31.783,-10.984)
C6: (85.551,-34.154,-10.833)
C5: (84.350,-33.650,-11.138)
O3': (87.927,-37.245,-8.221)
OP1: (81.619,-38.262,-17.106)
OP2: (80.132,-36.269,-16.408)
C3': (85.158,-35.849,-14.668)
C1': (85.446,-33.562,-15.270)
C5': (83.977,-36.423,-16.907)
O4': (84.847,-34.248,-16.346)
C8: (83.153,-32.488,-14.821)
O2': (87.284,-34.738,-14.367)
C6: (83.912,-29.429,-13.239)
C5: (83.761,-30.694,-13.861)
C4: (84.920,-31.393,-14.137)
P: (81.382,-36.788,-17.047)
C4': (85.058,-35.667,-16.173)
C2': (85.899,-34.589,-14.234)
C2: (86.196,-29.827,-13.270)
N1: (85.172,-29.025,-12.952)
N3: (86.180,-31.015,-13.861)
N6: (82.895,-28.607,-12.929)
N7: (82.648,-31.404,-14.289)
N9: (84.524,-32.541,-14.768)
O5': (82.675,-36.114,-16.388)
O3': (85.889,-37.028,-14.308)
OP2: (80.132,-36.269,-16.408)
C3': (85.158,-35.849,-14.668)
C1': (85.446,-33.562,-15.270)
C5': (83.977,-36.423,-16.907)
O4': (84.847,-34.248,-16.346)
C8: (83.153,-32.488,-14.821)
O2': (87.284,-34.738,-14.367)
C6: (83.912,-29.429,-13.239)
C5: (83.761,-30.694,-13.861)
C4: (84.920,-31.393,-14.137)
P: (81.382,-36.788,-17.047)
C4': (85.058,-35.667,-16.173)
C2': (85.899,-34.589,-14.234)
C2: (86.196,-29.827,-13.270)
N1: (85.172,-29.025,-12.952)
N3: (86.180,-31.015,-13.861)
N6: (82.895,-28.607,-12.929)
N7: (82.648,-31.404,-14.289)
N9: (84.524,-32.541,-14.768)
O5': (82.675,-36.114,-16.388)
O3': (85.889,-37.028,-14.308)
Image (generated by PyMOL):