ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02007:02006

Extra

PDB:
ATOM 1 O3' A A2006 34.258 130.326 92.504 1.00 33.62 O
ATOM 2 P C A2007 34.201 131.626 93.447 1.00 33.02 P
ATOM 3 OP1 C A2007 33.032 132.426 93.019 1.00 33.11 O
ATOM 4 OP2 C A2007 35.543 132.249 93.500 1.00 32.75 O
ATOM 5 O5' C A2007 33.887 131.056 94.893 1.00 32.83 O
ATOM 6 C5' C A2007 32.639 130.432 95.175 1.00 31.65 C
ATOM 7 C4' C A2007 32.725 129.666 96.466 1.00 33.10 C
ATOM 8 O4' C A2007 33.716 128.612 96.345 1.00 32.67 O
ATOM 9 C3' C A2007 33.191 130.450 97.683 1.00 32.09 C
ATOM 10 O3' C A2007 32.135 131.194 98.254 1.00 34.80 O
ATOM 11 C2' C A2007 33.623 129.324 98.602 1.00 32.86 C
ATOM 12 O2' C A2007 32.503 128.647 99.143 1.00 31.63 O
ATOM 13 C1' C A2007 34.333 128.404 97.607 1.00 33.16 C
ATOM 14 N1 C A2007 35.764 128.748 97.503 1.00 32.32 N
ATOM 15 C2 C A2007 36.649 128.217 98.448 1.00 31.40 C
ATOM 16 O2 C A2007 36.208 127.445 99.310 1.00 31.80 O
ATOM 17 N3 C A2007 37.959 128.558 98.396 1.00 30.70 N
ATOM 18 C4 C A2007 38.394 129.389 97.443 1.00 31.22 C
ATOM 19 N4 C A2007 39.690 129.708 97.428 1.00 27.92 N
ATOM 20 C5 C A2007 37.518 129.933 96.461 1.00 31.30 C
ATOM 21 C6 C A2007 36.224 129.586 96.525 1.00 31.32 C
ATOM 22 P A A2008 32.428 132.630 98.901 1.00 36.97 P
ATOM 23 OP1 A A2008 31.141 133.057 99.500 1.00 37.68 O
ATOM 24 OP2 A A2008 33.102 133.502 97.905 1.00 35.47 O
ATOM 25 O5' A A2008 33.469 132.329 100.066 1.00 36.54 O
TER

ATOM 1 O3' U B2005 39.325 129.506 89.012 1.00 33.10 O
ATOM 2 P A B2006 38.933 130.652 90.070 1.00 35.83 P
ATOM 3 OP1 A B2006 38.430 131.811 89.283 1.00 35.22 O
ATOM 4 OP2 A B2006 40.065 130.845 91.014 1.00 35.90 O
ATOM 5 O5' A B2006 37.734 130.018 90.908 1.00 34.96 O
ATOM 6 C5' A B2006 36.512 129.612 90.276 1.00 33.26 C
ATOM 7 C4' A B2006 35.674 128.797 91.236 1.00 34.00 C
ATOM 8 O4' A B2006 36.371 127.568 91.584 1.00 34.13 O
ATOM 9 C3' A B2006 35.372 129.443 92.581 1.00 33.20 C
ATOM 10 O3' A B2006 34.258 130.326 92.504 1.00 33.62 O
ATOM 11 C2' A B2006 35.042 128.231 93.436 1.00 33.70 C
ATOM 12 O2' A B2006 33.742 127.764 93.139 1.00 32.46 O
ATOM 13 C1' A B2006 36.071 127.215 92.927 1.00 33.63 C
ATOM 14 N9 A B2006 37.325 127.201 93.689 1.00 34.16 N
ATOM 15 C8 A B2006 38.519 127.781 93.331 1.00 34.78 C
ATOM 16 N7 A B2006 39.487 127.576 94.189 1.00 33.34 N
ATOM 17 C5 A B2006 38.895 126.817 95.185 1.00 32.95 C
ATOM 18 C6 A B2006 39.400 126.263 96.375 1.00 32.15 C
ATOM 19 N6 A B2006 40.665 126.386 96.772 1.00 28.73 N
ATOM 20 N1 A B2006 38.548 125.565 97.150 1.00 32.21 N
ATOM 21 C2 A B2006 37.279 125.433 96.746 1.00 32.89 C
ATOM 22 N3 A B2006 36.688 125.899 95.650 1.00 32.57 N
ATOM 23 C4 A B2006 37.559 126.590 94.899 1.00 33.52 C
ATOM 24 P C B2007 34.201 131.626 93.447 1.00 33.02 P
ATOM 25 OP1 C B2007 33.032 132.426 93.019 1.00 33.11 O
ATOM 26 OP2 C B2007 35.543 132.249 93.500 1.00 32.75 O
ATOM 27 O5' C B2007 33.887 131.056 94.893 1.00 32.83 O
TER

Atoms:
C2: (36.649,128.217,98.448)
OP1: (33.032,132.426,93.019)
OP2: (35.543,132.249,93.500)
C4: (38.394,129.389,97.443)
O5': (33.887,131.056,94.893)
C3': (33.191,130.450,97.683)
C1': (34.333,128.404,97.607)
O4': (33.716,128.612,96.345)
C5': (32.639,130.432,95.175)
P: (34.201,131.626,93.447)
O2: (36.208,127.445,99.310)
C4': (32.725,129.666,96.466)
C2': (33.623,129.324,98.602)
O2': (32.503,128.647,99.143)
N1: (35.764,128.748,97.503)
N3: (37.959,128.558,98.396)
N4: (39.690,129.708,97.428)
C6: (36.224,129.586,96.525)
C5: (37.518,129.933,96.461)
O3': (32.135,131.194,98.254)
OP1: (38.430,131.811,89.283)
OP2: (40.065,130.845,91.014)
C3': (35.372,129.443,92.581)
C1': (36.071,127.215,92.927)
C5': (36.512,129.612,90.276)
O4': (36.371,127.568,91.584)
C8: (38.519,127.781,93.331)
O2': (33.742,127.764,93.139)
C6: (39.400,126.263,96.375)
C5: (38.895,126.817,95.185)
C4: (37.559,126.590,94.899)
P: (38.933,130.652,90.070)
C4': (35.674,128.797,91.236)
C2': (35.042,128.231,93.436)
C2: (37.279,125.433,96.746)
N1: (38.548,125.565,97.150)
N3: (36.688,125.899,95.650)
N6: (40.665,126.386,96.772)
N7: (39.487,127.576,94.189)
N9: (37.325,127.201,93.689)
O5': (37.734,130.018,90.908)
O3': (34.258,130.326,92.504)
Image (generated by PyMOL):
PyMOL image
show in jmol