Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02339:02338
Extra
PDB:
ATOM 1 O3' A A2338 69.903 109.990 129.287 1.00 49.81 O
ATOM 2 P C A2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 3 OP1 C A2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 4 OP2 C A2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 5 O5' C A2339 68.764 108.932 131.269 1.00 50.19 O
ATOM 6 C5' C A2339 67.948 110.044 131.675 1.00 49.90 C
ATOM 7 C4' C A2339 66.522 109.604 131.909 1.00 50.36 C
ATOM 8 O4' C A2339 65.931 109.147 130.663 1.00 50.47 O
ATOM 9 C3' C A2339 66.298 108.427 132.844 1.00 50.01 C
ATOM 10 O3' C A2339 66.394 108.770 134.216 1.00 51.84 O
ATOM 11 C2' C A2339 64.890 108.006 132.457 1.00 48.36 C
ATOM 12 O2' C A2339 63.911 108.896 132.953 1.00 48.06 O
ATOM 13 C1' C A2339 64.965 108.142 130.938 1.00 46.92 C
ATOM 14 N1 C A2339 65.411 106.877 130.338 1.00 43.76 N
ATOM 15 C2 C A2339 64.462 105.883 130.102 1.00 43.43 C
ATOM 16 O2 C A2339 63.272 106.117 130.358 1.00 43.00 O
ATOM 17 N3 C A2339 64.862 104.695 129.601 1.00 42.50 N
ATOM 18 C4 C A2339 66.149 104.488 129.324 1.00 41.95 C
ATOM 19 N4 C A2339 66.498 103.294 128.844 1.00 43.34 N
ATOM 20 C5 C A2339 67.136 105.493 129.531 1.00 41.36 C
ATOM 21 C6 C A2339 66.727 106.661 130.034 1.00 42.41 C
ATOM 22 P U A2340 66.716 107.624 135.299 1.00 53.22 P
ATOM 23 OP1 U A2340 66.988 108.335 136.572 1.00 55.70 O
ATOM 24 OP2 U A2340 67.726 106.676 134.751 1.00 51.65 O
ATOM 25 O5' U A2340 65.348 106.820 135.448 1.00 52.37 O
TER
ATOM 1 O3' C B2337 72.613 107.478 124.514 1.00 48.04 O
ATOM 2 P A B2338 72.556 107.211 126.096 1.00 50.84 P
ATOM 3 OP1 A B2338 73.725 107.912 126.696 1.00 50.72 O
ATOM 4 OP2 A B2338 72.375 105.756 126.340 1.00 49.01 O
ATOM 5 O5' A B2338 71.231 107.974 126.544 1.00 46.89 O
ATOM 6 C5' A B2338 71.135 109.397 126.412 1.00 45.46 C
ATOM 7 C4' A B2338 69.780 109.876 126.864 1.00 47.02 C
ATOM 8 O4' A B2338 68.758 109.467 125.916 1.00 47.67 O
ATOM 9 C3' A B2338 69.296 109.320 128.187 1.00 47.47 C
ATOM 10 O3' A B2338 69.903 109.990 129.287 1.00 49.81 O
ATOM 11 C2' A B2338 67.791 109.532 128.078 1.00 45.82 C
ATOM 12 O2' A B2338 67.401 110.875 128.270 1.00 44.10 O
ATOM 13 C1' A B2338 67.552 109.187 126.608 1.00 44.95 C
ATOM 14 N9 A B2338 67.207 107.782 126.380 1.00 44.00 N
ATOM 15 C8 A B2338 68.038 106.753 126.003 1.00 42.11 C
ATOM 16 N7 A B2338 67.423 105.606 125.850 1.00 41.23 N
ATOM 17 C5 A B2338 66.101 105.894 126.151 1.00 42.23 C
ATOM 18 C6 A B2338 64.942 105.099 126.172 1.00 42.75 C
ATOM 19 N6 A B2338 64.926 103.801 125.863 1.00 43.56 N
ATOM 20 N1 A B2338 63.782 105.691 126.525 1.00 42.58 N
ATOM 21 C2 A B2338 63.797 106.994 126.834 1.00 44.06 C
ATOM 22 N3 A B2338 64.820 107.848 126.848 1.00 42.59 N
ATOM 23 C4 A B2338 65.955 107.228 126.491 1.00 42.86 C
ATOM 24 P C B2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 25 OP1 C B2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 26 OP2 C B2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 27 O5' C B2339 68.764 108.932 131.269 1.00 50.19 O
TER
ATOM 2 P C A2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 3 OP1 C A2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 4 OP2 C A2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 5 O5' C A2339 68.764 108.932 131.269 1.00 50.19 O
ATOM 6 C5' C A2339 67.948 110.044 131.675 1.00 49.90 C
ATOM 7 C4' C A2339 66.522 109.604 131.909 1.00 50.36 C
ATOM 8 O4' C A2339 65.931 109.147 130.663 1.00 50.47 O
ATOM 9 C3' C A2339 66.298 108.427 132.844 1.00 50.01 C
ATOM 10 O3' C A2339 66.394 108.770 134.216 1.00 51.84 O
ATOM 11 C2' C A2339 64.890 108.006 132.457 1.00 48.36 C
ATOM 12 O2' C A2339 63.911 108.896 132.953 1.00 48.06 O
ATOM 13 C1' C A2339 64.965 108.142 130.938 1.00 46.92 C
ATOM 14 N1 C A2339 65.411 106.877 130.338 1.00 43.76 N
ATOM 15 C2 C A2339 64.462 105.883 130.102 1.00 43.43 C
ATOM 16 O2 C A2339 63.272 106.117 130.358 1.00 43.00 O
ATOM 17 N3 C A2339 64.862 104.695 129.601 1.00 42.50 N
ATOM 18 C4 C A2339 66.149 104.488 129.324 1.00 41.95 C
ATOM 19 N4 C A2339 66.498 103.294 128.844 1.00 43.34 N
ATOM 20 C5 C A2339 67.136 105.493 129.531 1.00 41.36 C
ATOM 21 C6 C A2339 66.727 106.661 130.034 1.00 42.41 C
ATOM 22 P U A2340 66.716 107.624 135.299 1.00 53.22 P
ATOM 23 OP1 U A2340 66.988 108.335 136.572 1.00 55.70 O
ATOM 24 OP2 U A2340 67.726 106.676 134.751 1.00 51.65 O
ATOM 25 O5' U A2340 65.348 106.820 135.448 1.00 52.37 O
TER
ATOM 1 O3' C B2337 72.613 107.478 124.514 1.00 48.04 O
ATOM 2 P A B2338 72.556 107.211 126.096 1.00 50.84 P
ATOM 3 OP1 A B2338 73.725 107.912 126.696 1.00 50.72 O
ATOM 4 OP2 A B2338 72.375 105.756 126.340 1.00 49.01 O
ATOM 5 O5' A B2338 71.231 107.974 126.544 1.00 46.89 O
ATOM 6 C5' A B2338 71.135 109.397 126.412 1.00 45.46 C
ATOM 7 C4' A B2338 69.780 109.876 126.864 1.00 47.02 C
ATOM 8 O4' A B2338 68.758 109.467 125.916 1.00 47.67 O
ATOM 9 C3' A B2338 69.296 109.320 128.187 1.00 47.47 C
ATOM 10 O3' A B2338 69.903 109.990 129.287 1.00 49.81 O
ATOM 11 C2' A B2338 67.791 109.532 128.078 1.00 45.82 C
ATOM 12 O2' A B2338 67.401 110.875 128.270 1.00 44.10 O
ATOM 13 C1' A B2338 67.552 109.187 126.608 1.00 44.95 C
ATOM 14 N9 A B2338 67.207 107.782 126.380 1.00 44.00 N
ATOM 15 C8 A B2338 68.038 106.753 126.003 1.00 42.11 C
ATOM 16 N7 A B2338 67.423 105.606 125.850 1.00 41.23 N
ATOM 17 C5 A B2338 66.101 105.894 126.151 1.00 42.23 C
ATOM 18 C6 A B2338 64.942 105.099 126.172 1.00 42.75 C
ATOM 19 N6 A B2338 64.926 103.801 125.863 1.00 43.56 N
ATOM 20 N1 A B2338 63.782 105.691 126.525 1.00 42.58 N
ATOM 21 C2 A B2338 63.797 106.994 126.834 1.00 44.06 C
ATOM 22 N3 A B2338 64.820 107.848 126.848 1.00 42.59 N
ATOM 23 C4 A B2338 65.955 107.228 126.491 1.00 42.86 C
ATOM 24 P C B2339 70.209 109.181 130.644 1.00 51.53 P
ATOM 25 OP1 C B2339 70.946 110.120 131.531 1.00 51.52 O
ATOM 26 OP2 C B2339 70.809 107.862 130.309 1.00 49.66 O
ATOM 27 O5' C B2339 68.764 108.932 131.269 1.00 50.19 O
TER
Atoms:
C2: (64.462,105.883,130.102)
OP1: (70.946,110.120,131.531)
OP2: (70.809,107.862,130.309)
C4: (66.149,104.488,129.324)
O5': (68.764,108.932,131.269)
C3': (66.298,108.427,132.844)
C1': (64.965,108.142,130.938)
O4': (65.931,109.147,130.663)
C5': (67.948,110.044,131.675)
P: (70.209,109.181,130.644)
O2: (63.272,106.117,130.358)
C4': (66.522,109.604,131.909)
C2': (64.890,108.006,132.457)
O2': (63.911,108.896,132.953)
N1: (65.411,106.877,130.338)
N3: (64.862,104.695,129.601)
N4: (66.498,103.294,128.844)
C6: (66.727,106.661,130.034)
C5: (67.136,105.493,129.531)
O3': (66.394,108.770,134.216)
OP1: (70.946,110.120,131.531)
OP2: (70.809,107.862,130.309)
C4: (66.149,104.488,129.324)
O5': (68.764,108.932,131.269)
C3': (66.298,108.427,132.844)
C1': (64.965,108.142,130.938)
O4': (65.931,109.147,130.663)
C5': (67.948,110.044,131.675)
P: (70.209,109.181,130.644)
O2: (63.272,106.117,130.358)
C4': (66.522,109.604,131.909)
C2': (64.890,108.006,132.457)
O2': (63.911,108.896,132.953)
N1: (65.411,106.877,130.338)
N3: (64.862,104.695,129.601)
N4: (66.498,103.294,128.844)
C6: (66.727,106.661,130.034)
C5: (67.136,105.493,129.531)
O3': (66.394,108.770,134.216)
OP1: (73.725,107.912,126.696)
OP2: (72.375,105.756,126.340)
C3': (69.296,109.320,128.187)
C1': (67.552,109.187,126.608)
C5': (71.135,109.397,126.412)
O4': (68.758,109.467,125.916)
C8: (68.038,106.753,126.003)
O2': (67.401,110.875,128.270)
C6: (64.942,105.099,126.172)
C5: (66.101,105.894,126.151)
C4: (65.955,107.228,126.491)
P: (72.556,107.211,126.096)
C4': (69.780,109.876,126.864)
C2': (67.791,109.532,128.078)
C2: (63.797,106.994,126.834)
N1: (63.782,105.691,126.525)
N3: (64.820,107.848,126.848)
N6: (64.926,103.801,125.863)
N7: (67.423,105.606,125.850)
N9: (67.207,107.782,126.380)
O5': (71.231,107.974,126.544)
O3': (69.903,109.990,129.287)
OP2: (72.375,105.756,126.340)
C3': (69.296,109.320,128.187)
C1': (67.552,109.187,126.608)
C5': (71.135,109.397,126.412)
O4': (68.758,109.467,125.916)
C8: (68.038,106.753,126.003)
O2': (67.401,110.875,128.270)
C6: (64.942,105.099,126.172)
C5: (66.101,105.894,126.151)
C4: (65.955,107.228,126.491)
P: (72.556,107.211,126.096)
C4': (69.780,109.876,126.864)
C2': (67.791,109.532,128.078)
C2: (63.797,106.994,126.834)
N1: (63.782,105.691,126.525)
N3: (64.820,107.848,126.848)
N6: (64.926,103.801,125.863)
N7: (67.423,105.606,125.850)
N9: (67.207,107.782,126.380)
O5': (71.231,107.974,126.544)
O3': (69.903,109.990,129.287)
Image (generated by PyMOL):