Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y8Y:B6:B5
Extra
PDB:
ATOM 1 O3' A A 5 20.337 6.283 -6.200 1.00 30.76 O
ATOM 2 P C A 6 21.193 6.090 -7.548 1.00 30.84 P
ATOM 3 OP1 C A 6 22.516 6.723 -7.319 1.00 30.48 O
ATOM 4 OP2 C A 6 20.361 6.571 -8.677 1.00 32.70 O
ATOM 5 O5' C A 6 21.357 4.514 -7.633 1.00 32.31 O
ATOM 6 C5' C A 6 21.574 3.743 -6.459 1.00 30.46 C
ATOM 7 C4' C A 6 21.474 2.272 -6.747 1.00 38.25 C
ATOM 8 O4' C A 6 20.088 1.950 -7.081 1.00 42.71 O
ATOM 9 C3' C A 6 22.315 1.796 -7.934 1.00 43.91 C
ATOM 10 O3' C A 6 22.778 0.470 -7.694 1.00 47.66 O
ATOM 11 C2' C A 6 21.294 1.784 -9.063 1.00 45.37 C
ATOM 12 O2' C A 6 21.621 0.967 -10.165 1.00 43.70 O
ATOM 13 C1' C A 6 20.061 1.288 -8.328 1.00 42.90 C
ATOM 14 N1 C A 6 18.808 1.593 -9.032 1.00 30.57 N
ATOM 15 C2 C A 6 17.825 0.607 -9.198 1.00 23.44 C
ATOM 16 O2 C A 6 17.952 -0.496 -8.639 1.00 23.74 O
ATOM 17 N3 C A 6 16.738 0.917 -9.938 1.00 17.45 N
ATOM 18 C4 C A 6 16.634 2.120 -10.517 1.00 17.03 C
ATOM 19 N4 C A 6 15.565 2.423 -11.264 1.00 19.96 N
ATOM 20 C5 C A 6 17.637 3.110 -10.384 1.00 24.90 C
ATOM 21 C6 C A 6 18.709 2.792 -9.663 1.00 33.53 C
ATOM 22 P G A 7 24.349 0.148 -7.711 1.00 64.76 P
ATOM 23 OP1 G A 7 24.520 -1.208 -7.136 1.00 63.94 O
ATOM 24 OP2 G A 7 25.034 1.292 -7.061 1.00 61.19 O
ATOM 25 O5' G A 7 24.687 0.125 -9.265 1.00 81.53 O
TER
ATOM 1 O3' C B 4 15.778 10.261 -6.946 1.00 29.83 O
ATOM 2 P A B 5 16.919 9.651 -7.897 1.00 28.77 P
ATOM 3 OP1 A B 5 18.043 10.614 -7.894 1.00 32.67 O
ATOM 4 OP2 A B 5 16.285 9.302 -9.187 1.00 31.61 O
ATOM 5 O5' A B 5 17.342 8.327 -7.134 1.00 26.91 O
ATOM 6 C5' A B 5 17.938 8.386 -5.851 1.00 30.29 C
ATOM 7 C4' A B 5 18.176 7.007 -5.303 1.00 32.25 C
ATOM 8 O4' A B 5 16.908 6.336 -5.097 1.00 27.93 O
ATOM 9 C3' A B 5 18.938 6.058 -6.209 1.00 27.17 C
ATOM 10 O3' A B 5 20.337 6.283 -6.200 1.00 30.76 O
ATOM 11 C2' A B 5 18.525 4.695 -5.667 1.00 27.57 C
ATOM 12 O2' A B 5 19.212 4.404 -4.459 1.00 27.96 O
ATOM 13 C1' A B 5 17.061 4.950 -5.324 1.00 24.73 C
ATOM 14 N9 A B 5 16.150 4.541 -6.409 1.00 20.19 N
ATOM 15 C8 A B 5 15.548 5.303 -7.384 1.00 19.72 C
ATOM 16 N7 A B 5 14.778 4.604 -8.190 1.00 18.87 N
ATOM 17 C5 A B 5 14.886 3.301 -7.708 1.00 15.66 C
ATOM 18 C6 A B 5 14.314 2.076 -8.104 1.00 14.92 C
ATOM 19 N6 A B 5 13.472 1.956 -9.130 1.00 16.55 N
ATOM 20 N1 A B 5 14.633 0.964 -7.405 1.00 14.99 N
ATOM 21 C2 A B 5 15.472 1.067 -6.368 1.00 15.94 C
ATOM 22 N3 A B 5 16.066 2.161 -5.901 1.00 19.81 N
ATOM 23 C4 A B 5 15.720 3.252 -6.609 1.00 19.18 C
ATOM 24 P C B 6 21.193 6.090 -7.548 1.00 30.84 P
ATOM 25 OP1 C B 6 22.516 6.723 -7.319 1.00 30.48 O
ATOM 26 OP2 C B 6 20.361 6.571 -8.677 1.00 32.70 O
ATOM 27 O5' C B 6 21.357 4.514 -7.633 1.00 32.31 O
TER
ATOM 2 P C A 6 21.193 6.090 -7.548 1.00 30.84 P
ATOM 3 OP1 C A 6 22.516 6.723 -7.319 1.00 30.48 O
ATOM 4 OP2 C A 6 20.361 6.571 -8.677 1.00 32.70 O
ATOM 5 O5' C A 6 21.357 4.514 -7.633 1.00 32.31 O
ATOM 6 C5' C A 6 21.574 3.743 -6.459 1.00 30.46 C
ATOM 7 C4' C A 6 21.474 2.272 -6.747 1.00 38.25 C
ATOM 8 O4' C A 6 20.088 1.950 -7.081 1.00 42.71 O
ATOM 9 C3' C A 6 22.315 1.796 -7.934 1.00 43.91 C
ATOM 10 O3' C A 6 22.778 0.470 -7.694 1.00 47.66 O
ATOM 11 C2' C A 6 21.294 1.784 -9.063 1.00 45.37 C
ATOM 12 O2' C A 6 21.621 0.967 -10.165 1.00 43.70 O
ATOM 13 C1' C A 6 20.061 1.288 -8.328 1.00 42.90 C
ATOM 14 N1 C A 6 18.808 1.593 -9.032 1.00 30.57 N
ATOM 15 C2 C A 6 17.825 0.607 -9.198 1.00 23.44 C
ATOM 16 O2 C A 6 17.952 -0.496 -8.639 1.00 23.74 O
ATOM 17 N3 C A 6 16.738 0.917 -9.938 1.00 17.45 N
ATOM 18 C4 C A 6 16.634 2.120 -10.517 1.00 17.03 C
ATOM 19 N4 C A 6 15.565 2.423 -11.264 1.00 19.96 N
ATOM 20 C5 C A 6 17.637 3.110 -10.384 1.00 24.90 C
ATOM 21 C6 C A 6 18.709 2.792 -9.663 1.00 33.53 C
ATOM 22 P G A 7 24.349 0.148 -7.711 1.00 64.76 P
ATOM 23 OP1 G A 7 24.520 -1.208 -7.136 1.00 63.94 O
ATOM 24 OP2 G A 7 25.034 1.292 -7.061 1.00 61.19 O
ATOM 25 O5' G A 7 24.687 0.125 -9.265 1.00 81.53 O
TER
ATOM 1 O3' C B 4 15.778 10.261 -6.946 1.00 29.83 O
ATOM 2 P A B 5 16.919 9.651 -7.897 1.00 28.77 P
ATOM 3 OP1 A B 5 18.043 10.614 -7.894 1.00 32.67 O
ATOM 4 OP2 A B 5 16.285 9.302 -9.187 1.00 31.61 O
ATOM 5 O5' A B 5 17.342 8.327 -7.134 1.00 26.91 O
ATOM 6 C5' A B 5 17.938 8.386 -5.851 1.00 30.29 C
ATOM 7 C4' A B 5 18.176 7.007 -5.303 1.00 32.25 C
ATOM 8 O4' A B 5 16.908 6.336 -5.097 1.00 27.93 O
ATOM 9 C3' A B 5 18.938 6.058 -6.209 1.00 27.17 C
ATOM 10 O3' A B 5 20.337 6.283 -6.200 1.00 30.76 O
ATOM 11 C2' A B 5 18.525 4.695 -5.667 1.00 27.57 C
ATOM 12 O2' A B 5 19.212 4.404 -4.459 1.00 27.96 O
ATOM 13 C1' A B 5 17.061 4.950 -5.324 1.00 24.73 C
ATOM 14 N9 A B 5 16.150 4.541 -6.409 1.00 20.19 N
ATOM 15 C8 A B 5 15.548 5.303 -7.384 1.00 19.72 C
ATOM 16 N7 A B 5 14.778 4.604 -8.190 1.00 18.87 N
ATOM 17 C5 A B 5 14.886 3.301 -7.708 1.00 15.66 C
ATOM 18 C6 A B 5 14.314 2.076 -8.104 1.00 14.92 C
ATOM 19 N6 A B 5 13.472 1.956 -9.130 1.00 16.55 N
ATOM 20 N1 A B 5 14.633 0.964 -7.405 1.00 14.99 N
ATOM 21 C2 A B 5 15.472 1.067 -6.368 1.00 15.94 C
ATOM 22 N3 A B 5 16.066 2.161 -5.901 1.00 19.81 N
ATOM 23 C4 A B 5 15.720 3.252 -6.609 1.00 19.18 C
ATOM 24 P C B 6 21.193 6.090 -7.548 1.00 30.84 P
ATOM 25 OP1 C B 6 22.516 6.723 -7.319 1.00 30.48 O
ATOM 26 OP2 C B 6 20.361 6.571 -8.677 1.00 32.70 O
ATOM 27 O5' C B 6 21.357 4.514 -7.633 1.00 32.31 O
TER
Atoms:
C2: (17.825,0.607,-9.198)
OP1: (22.516,6.723,-7.319)
OP2: (20.361,6.571,-8.677)
C4: (16.634,2.120,-10.517)
O5': (21.357,4.514,-7.633)
C3': (22.315,1.796,-7.934)
C1': (20.061,1.288,-8.328)
O4': (20.088,1.950,-7.081)
C5': (21.574,3.743,-6.459)
P: (21.193,6.090,-7.548)
O2: (17.952,-0.496,-8.639)
C4': (21.474,2.272,-6.747)
C2': (21.294,1.784,-9.063)
O2': (21.621,0.967,-10.165)
N1: (18.808,1.593,-9.032)
N3: (16.738,0.917,-9.938)
N4: (15.565,2.423,-11.264)
C6: (18.709,2.792,-9.663)
C5: (17.637,3.110,-10.384)
O3': (22.778,0.470,-7.694)
OP1: (22.516,6.723,-7.319)
OP2: (20.361,6.571,-8.677)
C4: (16.634,2.120,-10.517)
O5': (21.357,4.514,-7.633)
C3': (22.315,1.796,-7.934)
C1': (20.061,1.288,-8.328)
O4': (20.088,1.950,-7.081)
C5': (21.574,3.743,-6.459)
P: (21.193,6.090,-7.548)
O2: (17.952,-0.496,-8.639)
C4': (21.474,2.272,-6.747)
C2': (21.294,1.784,-9.063)
O2': (21.621,0.967,-10.165)
N1: (18.808,1.593,-9.032)
N3: (16.738,0.917,-9.938)
N4: (15.565,2.423,-11.264)
C6: (18.709,2.792,-9.663)
C5: (17.637,3.110,-10.384)
O3': (22.778,0.470,-7.694)
OP1: (18.043,10.614,-7.894)
OP2: (16.285,9.302,-9.187)
C3': (18.938,6.058,-6.209)
C1': (17.061,4.950,-5.324)
C5': (17.938,8.386,-5.851)
O4': (16.908,6.336,-5.097)
C8: (15.548,5.303,-7.384)
O2': (19.212,4.404,-4.459)
C6: (14.314,2.076,-8.104)
C5: (14.886,3.301,-7.708)
C4: (15.720,3.252,-6.609)
P: (16.919,9.651,-7.897)
C4': (18.176,7.007,-5.303)
C2': (18.525,4.695,-5.667)
C2: (15.472,1.067,-6.368)
N1: (14.633,0.964,-7.405)
N3: (16.066,2.161,-5.901)
N6: (13.472,1.956,-9.130)
N7: (14.778,4.604,-8.190)
N9: (16.150,4.541,-6.409)
O5': (17.342,8.327,-7.134)
O3': (20.337,6.283,-6.200)
OP2: (16.285,9.302,-9.187)
C3': (18.938,6.058,-6.209)
C1': (17.061,4.950,-5.324)
C5': (17.938,8.386,-5.851)
O4': (16.908,6.336,-5.097)
C8: (15.548,5.303,-7.384)
O2': (19.212,4.404,-4.459)
C6: (14.314,2.076,-8.104)
C5: (14.886,3.301,-7.708)
C4: (15.720,3.252,-6.609)
P: (16.919,9.651,-7.897)
C4': (18.176,7.007,-5.303)
C2': (18.525,4.695,-5.667)
C2: (15.472,1.067,-6.368)
N1: (14.633,0.964,-7.405)
N3: (16.066,2.161,-5.901)
N6: (13.472,1.956,-9.130)
N7: (14.778,4.604,-8.190)
N9: (16.150,4.541,-6.409)
O5': (17.342,8.327,-7.134)
O3': (20.337,6.283,-6.200)
Image (generated by PyMOL):