Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0349:0348
Extra
PDB:
ATOM 1 O3' A A 348 54.109 114.090 4.748 1.00 94.38 O
ATOM 2 P C A 349 54.839 113.765 3.357 1.00 96.47 P
ATOM 3 OP1 C A 349 54.874 112.285 3.238 1.00 97.14 O
ATOM 4 OP2 C A 349 56.110 114.534 3.295 1.00 97.22 O
ATOM 5 O5' C A 349 53.838 114.353 2.266 1.00 96.91 O
ATOM 6 C5' C A 349 52.509 113.820 2.124 1.00 98.65 C
ATOM 7 C4' C A 349 51.690 114.687 1.202 1.00100.99 C
ATOM 8 O4' C A 349 51.524 116.003 1.797 1.00101.27 O
ATOM 9 C3' C A 349 52.301 114.986 -0.159 1.00102.73 C
ATOM 10 O3' C A 349 52.137 113.922 -1.091 1.00105.15 O
ATOM 11 C2' C A 349 51.553 116.249 -0.568 1.00102.00 C
ATOM 12 O2' C A 349 50.245 115.988 -1.041 1.00101.26 O
ATOM 13 C1' C A 349 51.477 116.988 0.771 1.00100.78 C
ATOM 14 N1 C A 349 52.598 117.932 0.965 1.00 99.26 N
ATOM 15 C2 C A 349 52.453 119.257 0.518 1.00 98.49 C
ATOM 16 O2 C A 349 51.386 119.602 -0.018 1.00 96.86 O
ATOM 17 N3 C A 349 53.482 120.126 0.684 1.00 97.91 N
ATOM 18 C4 C A 349 54.613 119.721 1.269 1.00 97.57 C
ATOM 19 N4 C A 349 55.597 120.611 1.414 1.00 96.71 N
ATOM 20 C5 C A 349 54.784 118.383 1.734 1.00 98.37 C
ATOM 21 C6 C A 349 53.763 117.531 1.564 1.00 99.02 C
ATOM 22 P G A 350 53.282 113.642 -2.187 1.00107.50 P
ATOM 23 OP1 G A 350 52.796 112.526 -3.039 1.00108.22 O
ATOM 24 OP2 G A 350 54.595 113.516 -1.495 1.00106.94 O
ATOM 25 O5' G A 350 53.304 114.970 -3.073 1.00108.26 O
TER
ATOM 1 O3' U B 347 57.715 117.577 8.323 1.00 89.12 O
ATOM 2 P A B 348 57.677 116.733 6.949 1.00 91.14 P
ATOM 3 OP1 A B 348 58.212 115.377 7.271 1.00 89.76 O
ATOM 4 OP2 A B 348 58.315 117.529 5.872 1.00 91.17 O
ATOM 5 O5' A B 348 56.120 116.612 6.613 1.00 90.57 O
ATOM 6 C5' A B 348 55.285 115.648 7.291 1.00 90.58 C
ATOM 7 C4' A B 348 53.920 115.586 6.647 1.00 90.19 C
ATOM 8 O4' A B 348 53.209 116.827 6.878 1.00 89.48 O
ATOM 9 C3' A B 348 53.916 115.439 5.137 1.00 90.91 C
ATOM 10 O3' A B 348 54.109 114.090 4.748 1.00 94.38 O
ATOM 11 C2' A B 348 52.543 115.974 4.759 1.00 89.25 C
ATOM 12 O2' A B 348 51.506 115.036 4.968 1.00 86.89 O
ATOM 13 C1' A B 348 52.392 117.125 5.755 1.00 88.31 C
ATOM 14 N9 A B 348 52.794 118.430 5.231 1.00 86.76 N
ATOM 15 C8 A B 348 53.996 119.076 5.401 1.00 86.31 C
ATOM 16 N7 A B 348 54.044 120.260 4.842 1.00 86.23 N
ATOM 17 C5 A B 348 52.793 120.404 4.256 1.00 86.25 C
ATOM 18 C6 A B 348 52.205 121.452 3.511 1.00 85.10 C
ATOM 19 N6 A B 348 52.823 122.602 3.233 1.00 83.88 N
ATOM 20 N1 A B 348 50.943 121.271 3.061 1.00 84.71 N
ATOM 21 C2 A B 348 50.320 120.117 3.345 1.00 85.46 C
ATOM 22 N3 A B 348 50.761 119.066 4.041 1.00 86.12 N
ATOM 23 C4 A B 348 52.018 119.276 4.475 1.00 86.61 C
ATOM 24 P C B 349 54.839 113.765 3.357 1.00 96.47 P
ATOM 25 OP1 C B 349 54.874 112.285 3.238 1.00 97.14 O
ATOM 26 OP2 C B 349 56.110 114.534 3.295 1.00 97.22 O
ATOM 27 O5' C B 349 53.838 114.353 2.266 1.00 96.91 O
TER
ATOM 2 P C A 349 54.839 113.765 3.357 1.00 96.47 P
ATOM 3 OP1 C A 349 54.874 112.285 3.238 1.00 97.14 O
ATOM 4 OP2 C A 349 56.110 114.534 3.295 1.00 97.22 O
ATOM 5 O5' C A 349 53.838 114.353 2.266 1.00 96.91 O
ATOM 6 C5' C A 349 52.509 113.820 2.124 1.00 98.65 C
ATOM 7 C4' C A 349 51.690 114.687 1.202 1.00100.99 C
ATOM 8 O4' C A 349 51.524 116.003 1.797 1.00101.27 O
ATOM 9 C3' C A 349 52.301 114.986 -0.159 1.00102.73 C
ATOM 10 O3' C A 349 52.137 113.922 -1.091 1.00105.15 O
ATOM 11 C2' C A 349 51.553 116.249 -0.568 1.00102.00 C
ATOM 12 O2' C A 349 50.245 115.988 -1.041 1.00101.26 O
ATOM 13 C1' C A 349 51.477 116.988 0.771 1.00100.78 C
ATOM 14 N1 C A 349 52.598 117.932 0.965 1.00 99.26 N
ATOM 15 C2 C A 349 52.453 119.257 0.518 1.00 98.49 C
ATOM 16 O2 C A 349 51.386 119.602 -0.018 1.00 96.86 O
ATOM 17 N3 C A 349 53.482 120.126 0.684 1.00 97.91 N
ATOM 18 C4 C A 349 54.613 119.721 1.269 1.00 97.57 C
ATOM 19 N4 C A 349 55.597 120.611 1.414 1.00 96.71 N
ATOM 20 C5 C A 349 54.784 118.383 1.734 1.00 98.37 C
ATOM 21 C6 C A 349 53.763 117.531 1.564 1.00 99.02 C
ATOM 22 P G A 350 53.282 113.642 -2.187 1.00107.50 P
ATOM 23 OP1 G A 350 52.796 112.526 -3.039 1.00108.22 O
ATOM 24 OP2 G A 350 54.595 113.516 -1.495 1.00106.94 O
ATOM 25 O5' G A 350 53.304 114.970 -3.073 1.00108.26 O
TER
ATOM 1 O3' U B 347 57.715 117.577 8.323 1.00 89.12 O
ATOM 2 P A B 348 57.677 116.733 6.949 1.00 91.14 P
ATOM 3 OP1 A B 348 58.212 115.377 7.271 1.00 89.76 O
ATOM 4 OP2 A B 348 58.315 117.529 5.872 1.00 91.17 O
ATOM 5 O5' A B 348 56.120 116.612 6.613 1.00 90.57 O
ATOM 6 C5' A B 348 55.285 115.648 7.291 1.00 90.58 C
ATOM 7 C4' A B 348 53.920 115.586 6.647 1.00 90.19 C
ATOM 8 O4' A B 348 53.209 116.827 6.878 1.00 89.48 O
ATOM 9 C3' A B 348 53.916 115.439 5.137 1.00 90.91 C
ATOM 10 O3' A B 348 54.109 114.090 4.748 1.00 94.38 O
ATOM 11 C2' A B 348 52.543 115.974 4.759 1.00 89.25 C
ATOM 12 O2' A B 348 51.506 115.036 4.968 1.00 86.89 O
ATOM 13 C1' A B 348 52.392 117.125 5.755 1.00 88.31 C
ATOM 14 N9 A B 348 52.794 118.430 5.231 1.00 86.76 N
ATOM 15 C8 A B 348 53.996 119.076 5.401 1.00 86.31 C
ATOM 16 N7 A B 348 54.044 120.260 4.842 1.00 86.23 N
ATOM 17 C5 A B 348 52.793 120.404 4.256 1.00 86.25 C
ATOM 18 C6 A B 348 52.205 121.452 3.511 1.00 85.10 C
ATOM 19 N6 A B 348 52.823 122.602 3.233 1.00 83.88 N
ATOM 20 N1 A B 348 50.943 121.271 3.061 1.00 84.71 N
ATOM 21 C2 A B 348 50.320 120.117 3.345 1.00 85.46 C
ATOM 22 N3 A B 348 50.761 119.066 4.041 1.00 86.12 N
ATOM 23 C4 A B 348 52.018 119.276 4.475 1.00 86.61 C
ATOM 24 P C B 349 54.839 113.765 3.357 1.00 96.47 P
ATOM 25 OP1 C B 349 54.874 112.285 3.238 1.00 97.14 O
ATOM 26 OP2 C B 349 56.110 114.534 3.295 1.00 97.22 O
ATOM 27 O5' C B 349 53.838 114.353 2.266 1.00 96.91 O
TER
Atoms:
C2: (52.453,119.257,0.518)
OP1: (54.874,112.285,3.238)
OP2: (56.110,114.534,3.295)
C4: (54.613,119.721,1.269)
O5': (53.838,114.353,2.266)
C3': (52.301,114.986,-0.159)
C1': (51.477,116.988,0.771)
O4': (51.524,116.003,1.797)
C5': (52.509,113.820,2.124)
P: (54.839,113.765,3.357)
O2: (51.386,119.602,-0.018)
C4': (51.690,114.687,1.202)
C2': (51.553,116.249,-0.568)
O2': (50.245,115.988,-1.041)
N1: (52.598,117.932,0.965)
N3: (53.482,120.126,0.684)
N4: (55.597,120.611,1.414)
C6: (53.763,117.531,1.564)
C5: (54.784,118.383,1.734)
O3': (52.137,113.922,-1.091)
OP1: (54.874,112.285,3.238)
OP2: (56.110,114.534,3.295)
C4: (54.613,119.721,1.269)
O5': (53.838,114.353,2.266)
C3': (52.301,114.986,-0.159)
C1': (51.477,116.988,0.771)
O4': (51.524,116.003,1.797)
C5': (52.509,113.820,2.124)
P: (54.839,113.765,3.357)
O2: (51.386,119.602,-0.018)
C4': (51.690,114.687,1.202)
C2': (51.553,116.249,-0.568)
O2': (50.245,115.988,-1.041)
N1: (52.598,117.932,0.965)
N3: (53.482,120.126,0.684)
N4: (55.597,120.611,1.414)
C6: (53.763,117.531,1.564)
C5: (54.784,118.383,1.734)
O3': (52.137,113.922,-1.091)
OP1: (58.212,115.377,7.271)
OP2: (58.315,117.529,5.872)
C3': (53.916,115.439,5.137)
C1': (52.392,117.125,5.755)
C5': (55.285,115.648,7.291)
O4': (53.209,116.827,6.878)
C8: (53.996,119.076,5.401)
O2': (51.506,115.036,4.968)
C6: (52.205,121.452,3.511)
C5: (52.793,120.404,4.256)
C4: (52.018,119.276,4.475)
P: (57.677,116.733,6.949)
C4': (53.920,115.586,6.647)
C2': (52.543,115.974,4.759)
C2: (50.320,120.117,3.345)
N1: (50.943,121.271,3.061)
N3: (50.761,119.066,4.041)
N6: (52.823,122.602,3.233)
N7: (54.044,120.260,4.842)
N9: (52.794,118.430,5.231)
O5': (56.120,116.612,6.613)
O3': (54.109,114.090,4.748)
OP2: (58.315,117.529,5.872)
C3': (53.916,115.439,5.137)
C1': (52.392,117.125,5.755)
C5': (55.285,115.648,7.291)
O4': (53.209,116.827,6.878)
C8: (53.996,119.076,5.401)
O2': (51.506,115.036,4.968)
C6: (52.205,121.452,3.511)
C5: (52.793,120.404,4.256)
C4: (52.018,119.276,4.475)
P: (57.677,116.733,6.949)
C4': (53.920,115.586,6.647)
C2': (52.543,115.974,4.759)
C2: (50.320,120.117,3.345)
N1: (50.943,121.271,3.061)
N3: (50.761,119.066,4.041)
N6: (52.823,122.602,3.233)
N7: (54.044,120.260,4.842)
N9: (52.794,118.430,5.231)
O5': (56.120,116.612,6.613)
O3': (54.109,114.090,4.748)
Image (generated by PyMOL):