Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1477:A1358
Extra
PDB:
ATOM 1 O3' G A1476 -10.017 -33.674 -13.231 1.00 94.61 O
ATOM 2 P G A1477 -10.219 -35.023 -12.372 1.00 93.27 P
ATOM 3 OP1 G A1477 -10.895 -34.662 -11.102 1.00 85.52 O
ATOM 4 OP2 G A1477 -8.910 -35.732 -12.329 1.00 86.54 O
ATOM 5 O5' G A1477 -11.265 -35.853 -13.241 1.00 93.11 O
ATOM 6 C5' G A1477 -12.543 -35.300 -13.558 1.00 93.18 C
ATOM 7 C4' G A1477 -12.932 -35.639 -14.980 1.00 94.98 C
ATOM 8 O4' G A1477 -12.002 -35.020 -15.911 1.00 90.96 O
ATOM 9 C3' G A1477 -12.918 -37.115 -15.352 1.00100.09 C
ATOM 10 O3' G A1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 11 C2' G A1477 -12.753 -37.077 -16.870 1.00101.54 C
ATOM 12 O2' G A1477 -13.968 -36.908 -17.574 1.00109.38 O
ATOM 13 C1' G A1477 -11.868 -35.840 -17.060 1.00 94.82 C
ATOM 14 N9 G A1477 -10.460 -36.186 -17.235 1.00 89.67 N
ATOM 15 C8 G A1477 -9.594 -36.655 -16.279 1.00 93.96 C
ATOM 16 N7 G A1477 -8.408 -36.922 -16.750 1.00 93.91 N
ATOM 17 C5 G A1477 -8.491 -36.601 -18.095 1.00 88.99 C
ATOM 18 C6 G A1477 -7.518 -36.690 -19.126 1.00 86.96 C
ATOM 19 O6 G A1477 -6.349 -37.092 -19.054 1.00 84.52 O
ATOM 20 N1 G A1477 -8.022 -36.249 -20.344 1.00 89.15 N
ATOM 21 C2 G A1477 -9.300 -35.784 -20.548 1.00 92.38 C
ATOM 22 N2 G A1477 -9.595 -35.383 -21.796 1.00 91.24 N
ATOM 23 N3 G A1477 -10.218 -35.710 -19.599 1.00 96.65 N
ATOM 24 C4 G A1477 -9.749 -36.132 -18.407 1.00 91.03 C
ATOM 25 P U A1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 26 OP1 U A1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 27 OP2 U A1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 28 O5' U A1478 -13.071 -40.045 -14.448 1.00101.25 O
TER
ATOM 1 O3' C B1357 -6.878 -38.424 -22.670 1.00 64.54 O
ATOM 2 P C B1358 -6.689 -37.473 -23.953 1.00 66.62 P
ATOM 3 OP1 C B1358 -7.649 -36.346 -23.835 1.00 77.34 O
ATOM 4 OP2 C B1358 -6.689 -38.329 -25.179 1.00 54.76 O
ATOM 5 O5' C B1358 -5.209 -36.880 -23.838 1.00 74.17 O
ATOM 6 C5' C B1358 -4.588 -36.317 -24.996 1.00 69.05 C
ATOM 7 C4' C B1358 -3.106 -36.084 -24.787 1.00 65.65 C
ATOM 8 O4' C B1358 -2.425 -37.341 -24.522 1.00 63.26 O
ATOM 9 C3' C B1358 -2.432 -35.589 -26.055 1.00 68.35 C
ATOM 10 O3' C B1358 -2.595 -34.212 -26.303 1.00 68.83 O
ATOM 11 C2' C B1358 -0.984 -36.019 -25.896 1.00 67.36 C
ATOM 12 O2' C B1358 -0.151 -35.093 -25.217 1.00 62.07 O
ATOM 13 C1' C B1358 -1.147 -37.345 -25.155 1.00 63.82 C
ATOM 14 N1 C B1358 -1.070 -38.475 -26.106 1.00 54.54 N
ATOM 15 C2 C B1358 0.166 -38.753 -26.699 1.00 55.39 C
ATOM 16 O2 C B1358 1.152 -38.078 -26.381 1.00 56.49 O
ATOM 17 N3 C B1358 0.261 -39.740 -27.601 1.00 52.73 N
ATOM 18 C4 C B1358 -0.813 -40.445 -27.917 1.00 53.03 C
ATOM 19 N4 C B1358 -0.670 -41.402 -28.835 1.00 50.77 N
ATOM 20 C5 C B1358 -2.082 -40.203 -27.319 1.00 53.80 C
ATOM 21 C6 C B1358 -2.164 -39.217 -26.426 1.00 50.29 C
ATOM 22 P C B1359 -2.776 -33.734 -27.820 1.00 69.04 P
ATOM 23 OP1 C B1359 -3.795 -32.655 -27.856 1.00 71.52 O
ATOM 24 OP2 C B1359 -2.949 -34.945 -28.676 1.00 53.48 O
ATOM 25 O5' C B1359 -1.353 -33.125 -28.158 1.00 69.71 O
TER
ATOM 2 P G A1477 -10.219 -35.023 -12.372 1.00 93.27 P
ATOM 3 OP1 G A1477 -10.895 -34.662 -11.102 1.00 85.52 O
ATOM 4 OP2 G A1477 -8.910 -35.732 -12.329 1.00 86.54 O
ATOM 5 O5' G A1477 -11.265 -35.853 -13.241 1.00 93.11 O
ATOM 6 C5' G A1477 -12.543 -35.300 -13.558 1.00 93.18 C
ATOM 7 C4' G A1477 -12.932 -35.639 -14.980 1.00 94.98 C
ATOM 8 O4' G A1477 -12.002 -35.020 -15.911 1.00 90.96 O
ATOM 9 C3' G A1477 -12.918 -37.115 -15.352 1.00100.09 C
ATOM 10 O3' G A1477 -14.104 -37.792 -14.937 1.00102.90 O
ATOM 11 C2' G A1477 -12.753 -37.077 -16.870 1.00101.54 C
ATOM 12 O2' G A1477 -13.968 -36.908 -17.574 1.00109.38 O
ATOM 13 C1' G A1477 -11.868 -35.840 -17.060 1.00 94.82 C
ATOM 14 N9 G A1477 -10.460 -36.186 -17.235 1.00 89.67 N
ATOM 15 C8 G A1477 -9.594 -36.655 -16.279 1.00 93.96 C
ATOM 16 N7 G A1477 -8.408 -36.922 -16.750 1.00 93.91 N
ATOM 17 C5 G A1477 -8.491 -36.601 -18.095 1.00 88.99 C
ATOM 18 C6 G A1477 -7.518 -36.690 -19.126 1.00 86.96 C
ATOM 19 O6 G A1477 -6.349 -37.092 -19.054 1.00 84.52 O
ATOM 20 N1 G A1477 -8.022 -36.249 -20.344 1.00 89.15 N
ATOM 21 C2 G A1477 -9.300 -35.784 -20.548 1.00 92.38 C
ATOM 22 N2 G A1477 -9.595 -35.383 -21.796 1.00 91.24 N
ATOM 23 N3 G A1477 -10.218 -35.710 -19.599 1.00 96.65 N
ATOM 24 C4 G A1477 -9.749 -36.132 -18.407 1.00 91.03 C
ATOM 25 P U A1478 -14.011 -38.923 -13.796 1.00109.47 P
ATOM 26 OP1 U A1478 -15.367 -39.485 -13.571 1.00107.17 O
ATOM 27 OP2 U A1478 -13.301 -38.269 -12.668 1.00105.54 O
ATOM 28 O5' U A1478 -13.071 -40.045 -14.448 1.00101.25 O
TER
ATOM 1 O3' C B1357 -6.878 -38.424 -22.670 1.00 64.54 O
ATOM 2 P C B1358 -6.689 -37.473 -23.953 1.00 66.62 P
ATOM 3 OP1 C B1358 -7.649 -36.346 -23.835 1.00 77.34 O
ATOM 4 OP2 C B1358 -6.689 -38.329 -25.179 1.00 54.76 O
ATOM 5 O5' C B1358 -5.209 -36.880 -23.838 1.00 74.17 O
ATOM 6 C5' C B1358 -4.588 -36.317 -24.996 1.00 69.05 C
ATOM 7 C4' C B1358 -3.106 -36.084 -24.787 1.00 65.65 C
ATOM 8 O4' C B1358 -2.425 -37.341 -24.522 1.00 63.26 O
ATOM 9 C3' C B1358 -2.432 -35.589 -26.055 1.00 68.35 C
ATOM 10 O3' C B1358 -2.595 -34.212 -26.303 1.00 68.83 O
ATOM 11 C2' C B1358 -0.984 -36.019 -25.896 1.00 67.36 C
ATOM 12 O2' C B1358 -0.151 -35.093 -25.217 1.00 62.07 O
ATOM 13 C1' C B1358 -1.147 -37.345 -25.155 1.00 63.82 C
ATOM 14 N1 C B1358 -1.070 -38.475 -26.106 1.00 54.54 N
ATOM 15 C2 C B1358 0.166 -38.753 -26.699 1.00 55.39 C
ATOM 16 O2 C B1358 1.152 -38.078 -26.381 1.00 56.49 O
ATOM 17 N3 C B1358 0.261 -39.740 -27.601 1.00 52.73 N
ATOM 18 C4 C B1358 -0.813 -40.445 -27.917 1.00 53.03 C
ATOM 19 N4 C B1358 -0.670 -41.402 -28.835 1.00 50.77 N
ATOM 20 C5 C B1358 -2.082 -40.203 -27.319 1.00 53.80 C
ATOM 21 C6 C B1358 -2.164 -39.217 -26.426 1.00 50.29 C
ATOM 22 P C B1359 -2.776 -33.734 -27.820 1.00 69.04 P
ATOM 23 OP1 C B1359 -3.795 -32.655 -27.856 1.00 71.52 O
ATOM 24 OP2 C B1359 -2.949 -34.945 -28.676 1.00 53.48 O
ATOM 25 O5' C B1359 -1.353 -33.125 -28.158 1.00 69.71 O
TER
Atoms:
OP1: (-10.895,-34.662,-11.102)
OP2: (-8.910,-35.732,-12.329)
C3': (-12.918,-37.115,-15.352)
C1': (-11.868,-35.840,-17.060)
C5': (-12.543,-35.300,-13.558)
O6: (-6.349,-37.092,-19.054)
O4': (-12.002,-35.020,-15.911)
C8: (-9.594,-36.655,-16.279)
C2: (-9.300,-35.784,-20.548)
C6: (-7.518,-36.690,-19.126)
C5: (-8.491,-36.601,-18.095)
C4: (-9.749,-36.132,-18.407)
P: (-10.219,-35.023,-12.372)
C4': (-12.932,-35.639,-14.980)
C2': (-12.753,-37.077,-16.870)
O2': (-13.968,-36.908,-17.574)
N1: (-8.022,-36.249,-20.344)
N2: (-9.595,-35.383,-21.796)
N3: (-10.218,-35.710,-19.599)
N7: (-8.408,-36.922,-16.750)
N9: (-10.460,-36.186,-17.235)
O5': (-11.265,-35.853,-13.241)
O3': (-14.104,-37.792,-14.937)
OP2: (-8.910,-35.732,-12.329)
C3': (-12.918,-37.115,-15.352)
C1': (-11.868,-35.840,-17.060)
C5': (-12.543,-35.300,-13.558)
O6: (-6.349,-37.092,-19.054)
O4': (-12.002,-35.020,-15.911)
C8: (-9.594,-36.655,-16.279)
C2: (-9.300,-35.784,-20.548)
C6: (-7.518,-36.690,-19.126)
C5: (-8.491,-36.601,-18.095)
C4: (-9.749,-36.132,-18.407)
P: (-10.219,-35.023,-12.372)
C4': (-12.932,-35.639,-14.980)
C2': (-12.753,-37.077,-16.870)
O2': (-13.968,-36.908,-17.574)
N1: (-8.022,-36.249,-20.344)
N2: (-9.595,-35.383,-21.796)
N3: (-10.218,-35.710,-19.599)
N7: (-8.408,-36.922,-16.750)
N9: (-10.460,-36.186,-17.235)
O5': (-11.265,-35.853,-13.241)
O3': (-14.104,-37.792,-14.937)
C2: (0.166,-38.753,-26.699)
OP1: (-7.649,-36.346,-23.835)
OP2: (-6.689,-38.329,-25.179)
C4: (-0.813,-40.445,-27.917)
O5': (-5.209,-36.880,-23.838)
C3': (-2.432,-35.589,-26.055)
C1': (-1.147,-37.345,-25.155)
O4': (-2.425,-37.341,-24.522)
C5': (-4.588,-36.317,-24.996)
P: (-6.689,-37.473,-23.953)
O2: (1.152,-38.078,-26.381)
C4': (-3.106,-36.084,-24.787)
C2': (-0.984,-36.019,-25.896)
O2': (-0.151,-35.093,-25.217)
N1: (-1.070,-38.475,-26.106)
N3: (0.261,-39.740,-27.601)
N4: (-0.670,-41.402,-28.835)
C6: (-2.164,-39.217,-26.426)
C5: (-2.082,-40.203,-27.319)
O3': (-2.595,-34.212,-26.303)
OP1: (-7.649,-36.346,-23.835)
OP2: (-6.689,-38.329,-25.179)
C4: (-0.813,-40.445,-27.917)
O5': (-5.209,-36.880,-23.838)
C3': (-2.432,-35.589,-26.055)
C1': (-1.147,-37.345,-25.155)
O4': (-2.425,-37.341,-24.522)
C5': (-4.588,-36.317,-24.996)
P: (-6.689,-37.473,-23.953)
O2: (1.152,-38.078,-26.381)
C4': (-3.106,-36.084,-24.787)
C2': (-0.984,-36.019,-25.896)
O2': (-0.151,-35.093,-25.217)
N1: (-1.070,-38.475,-26.106)
N3: (0.261,-39.740,-27.601)
N4: (-0.670,-41.402,-28.835)
C6: (-2.164,-39.217,-26.426)
C5: (-2.082,-40.203,-27.319)
O3': (-2.595,-34.212,-26.303)
Image (generated by PyMOL):