Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:C59:C58
Extra
PDB:
ATOM 1 O3' A A 58 18.436 -33.971 -51.578 1.00 60.16 O
ATOM 2 P C A 59 19.724 -34.239 -50.655 1.00 68.70 P
ATOM 3 OP1 C A 59 19.473 -35.495 -49.909 1.00 56.86 O
ATOM 4 OP2 C A 59 19.978 -32.995 -49.890 1.00 60.23 O
ATOM 5 O5' C A 59 20.886 -34.466 -51.722 1.00 55.69 O
ATOM 6 C5' C A 59 20.892 -35.605 -52.571 1.00 54.73 C
ATOM 7 C4' C A 59 21.856 -35.432 -53.720 1.00 52.93 C
ATOM 8 O4' C A 59 21.530 -34.225 -54.459 1.00 54.06 O
ATOM 9 C3' C A 59 23.320 -35.250 -53.342 1.00 51.62 C
ATOM 10 O3' C A 59 23.979 -36.473 -53.065 1.00 52.06 O
ATOM 11 C2' C A 59 23.887 -34.515 -54.549 1.00 54.98 C
ATOM 12 O2' C A 59 24.128 -35.416 -55.620 1.00 47.64 O
ATOM 13 C1' C A 59 22.713 -33.612 -54.929 1.00 51.85 C
ATOM 14 N1 C A 59 22.826 -32.273 -54.314 1.00 53.26 N
ATOM 15 C2 C A 59 23.737 -31.375 -54.873 1.00 52.03 C
ATOM 16 O2 C A 59 24.408 -31.741 -55.849 1.00 48.48 O
ATOM 17 N3 C A 59 23.864 -30.140 -54.335 1.00 47.14 N
ATOM 18 C4 C A 59 23.119 -29.792 -53.283 1.00 44.54 C
ATOM 19 N4 C A 59 23.275 -28.564 -52.784 1.00 41.19 N
ATOM 20 C5 C A 59 22.178 -30.689 -52.694 1.00 51.20 C
ATOM 21 C6 C A 59 22.063 -31.909 -53.237 1.00 53.28 C
ATOM 22 P U A 60 25.162 -36.527 -51.976 1.00 51.32 P
ATOM 23 OP1 U A 60 25.617 -37.936 -51.896 1.00 58.00 O
ATOM 24 OP2 U A 60 24.652 -35.873 -50.747 1.00 46.61 O
ATOM 25 O5' U A 60 26.300 -35.628 -52.638 1.00 50.67 O
TER
ATOM 1 O3' G B 57 12.948 -29.698 -51.179 1.00 62.09 O
ATOM 2 P A B 58 14.470 -29.774 -50.666 1.00 65.63 P
ATOM 3 OP1 A B 58 14.429 -30.151 -49.233 1.00 59.57 O
ATOM 4 OP2 A B 58 15.123 -28.499 -51.046 1.00 65.47 O
ATOM 5 O5' A B 58 15.072 -30.973 -51.525 1.00 58.61 O
ATOM 6 C5' A B 58 16.380 -31.470 -51.275 1.00 56.81 C
ATOM 7 C4' A B 58 16.900 -32.267 -52.446 1.00 52.52 C
ATOM 8 O4' A B 58 16.912 -31.437 -53.635 1.00 60.74 O
ATOM 9 C3' A B 58 18.332 -32.773 -52.329 1.00 55.54 C
ATOM 10 O3' A B 58 18.436 -33.971 -51.578 1.00 60.16 O
ATOM 11 C2' A B 58 18.752 -32.930 -53.784 1.00 57.98 C
ATOM 12 O2' A B 58 18.226 -34.129 -54.334 1.00 55.59 O
ATOM 13 C1' A B 58 18.034 -31.747 -54.432 1.00 59.72 C
ATOM 14 N9 A B 58 18.896 -30.554 -54.510 1.00 55.82 N
ATOM 15 C8 A B 58 18.855 -29.427 -53.729 1.00 51.00 C
ATOM 16 N7 A B 58 19.755 -28.532 -54.052 1.00 47.29 N
ATOM 17 C5 A B 58 20.430 -29.110 -55.117 1.00 47.11 C
ATOM 18 C6 A B 58 21.501 -28.671 -55.914 1.00 49.71 C
ATOM 19 N6 A B 58 22.109 -27.493 -55.752 1.00 51.68 N
ATOM 20 N1 A B 58 21.936 -29.492 -56.896 1.00 49.48 N
ATOM 21 C2 A B 58 21.329 -30.674 -57.058 1.00 48.37 C
ATOM 22 N3 A B 58 20.316 -31.198 -56.375 1.00 47.70 N
ATOM 23 C4 A B 58 19.909 -30.355 -55.411 1.00 51.92 C
ATOM 24 P C B 59 19.724 -34.239 -50.655 1.00 68.70 P
ATOM 25 OP1 C B 59 19.473 -35.495 -49.909 1.00 56.86 O
ATOM 26 OP2 C B 59 19.978 -32.995 -49.890 1.00 60.23 O
ATOM 27 O5' C B 59 20.886 -34.466 -51.722 1.00 55.69 O
TER
ATOM 2 P C A 59 19.724 -34.239 -50.655 1.00 68.70 P
ATOM 3 OP1 C A 59 19.473 -35.495 -49.909 1.00 56.86 O
ATOM 4 OP2 C A 59 19.978 -32.995 -49.890 1.00 60.23 O
ATOM 5 O5' C A 59 20.886 -34.466 -51.722 1.00 55.69 O
ATOM 6 C5' C A 59 20.892 -35.605 -52.571 1.00 54.73 C
ATOM 7 C4' C A 59 21.856 -35.432 -53.720 1.00 52.93 C
ATOM 8 O4' C A 59 21.530 -34.225 -54.459 1.00 54.06 O
ATOM 9 C3' C A 59 23.320 -35.250 -53.342 1.00 51.62 C
ATOM 10 O3' C A 59 23.979 -36.473 -53.065 1.00 52.06 O
ATOM 11 C2' C A 59 23.887 -34.515 -54.549 1.00 54.98 C
ATOM 12 O2' C A 59 24.128 -35.416 -55.620 1.00 47.64 O
ATOM 13 C1' C A 59 22.713 -33.612 -54.929 1.00 51.85 C
ATOM 14 N1 C A 59 22.826 -32.273 -54.314 1.00 53.26 N
ATOM 15 C2 C A 59 23.737 -31.375 -54.873 1.00 52.03 C
ATOM 16 O2 C A 59 24.408 -31.741 -55.849 1.00 48.48 O
ATOM 17 N3 C A 59 23.864 -30.140 -54.335 1.00 47.14 N
ATOM 18 C4 C A 59 23.119 -29.792 -53.283 1.00 44.54 C
ATOM 19 N4 C A 59 23.275 -28.564 -52.784 1.00 41.19 N
ATOM 20 C5 C A 59 22.178 -30.689 -52.694 1.00 51.20 C
ATOM 21 C6 C A 59 22.063 -31.909 -53.237 1.00 53.28 C
ATOM 22 P U A 60 25.162 -36.527 -51.976 1.00 51.32 P
ATOM 23 OP1 U A 60 25.617 -37.936 -51.896 1.00 58.00 O
ATOM 24 OP2 U A 60 24.652 -35.873 -50.747 1.00 46.61 O
ATOM 25 O5' U A 60 26.300 -35.628 -52.638 1.00 50.67 O
TER
ATOM 1 O3' G B 57 12.948 -29.698 -51.179 1.00 62.09 O
ATOM 2 P A B 58 14.470 -29.774 -50.666 1.00 65.63 P
ATOM 3 OP1 A B 58 14.429 -30.151 -49.233 1.00 59.57 O
ATOM 4 OP2 A B 58 15.123 -28.499 -51.046 1.00 65.47 O
ATOM 5 O5' A B 58 15.072 -30.973 -51.525 1.00 58.61 O
ATOM 6 C5' A B 58 16.380 -31.470 -51.275 1.00 56.81 C
ATOM 7 C4' A B 58 16.900 -32.267 -52.446 1.00 52.52 C
ATOM 8 O4' A B 58 16.912 -31.437 -53.635 1.00 60.74 O
ATOM 9 C3' A B 58 18.332 -32.773 -52.329 1.00 55.54 C
ATOM 10 O3' A B 58 18.436 -33.971 -51.578 1.00 60.16 O
ATOM 11 C2' A B 58 18.752 -32.930 -53.784 1.00 57.98 C
ATOM 12 O2' A B 58 18.226 -34.129 -54.334 1.00 55.59 O
ATOM 13 C1' A B 58 18.034 -31.747 -54.432 1.00 59.72 C
ATOM 14 N9 A B 58 18.896 -30.554 -54.510 1.00 55.82 N
ATOM 15 C8 A B 58 18.855 -29.427 -53.729 1.00 51.00 C
ATOM 16 N7 A B 58 19.755 -28.532 -54.052 1.00 47.29 N
ATOM 17 C5 A B 58 20.430 -29.110 -55.117 1.00 47.11 C
ATOM 18 C6 A B 58 21.501 -28.671 -55.914 1.00 49.71 C
ATOM 19 N6 A B 58 22.109 -27.493 -55.752 1.00 51.68 N
ATOM 20 N1 A B 58 21.936 -29.492 -56.896 1.00 49.48 N
ATOM 21 C2 A B 58 21.329 -30.674 -57.058 1.00 48.37 C
ATOM 22 N3 A B 58 20.316 -31.198 -56.375 1.00 47.70 N
ATOM 23 C4 A B 58 19.909 -30.355 -55.411 1.00 51.92 C
ATOM 24 P C B 59 19.724 -34.239 -50.655 1.00 68.70 P
ATOM 25 OP1 C B 59 19.473 -35.495 -49.909 1.00 56.86 O
ATOM 26 OP2 C B 59 19.978 -32.995 -49.890 1.00 60.23 O
ATOM 27 O5' C B 59 20.886 -34.466 -51.722 1.00 55.69 O
TER
Atoms:
C2: (23.737,-31.375,-54.873)
OP1: (19.473,-35.495,-49.909)
OP2: (19.978,-32.995,-49.890)
C4: (23.119,-29.792,-53.283)
O5': (20.886,-34.466,-51.722)
C3': (23.320,-35.250,-53.342)
C1': (22.713,-33.612,-54.929)
O4': (21.530,-34.225,-54.459)
C5': (20.892,-35.605,-52.571)
P: (19.724,-34.239,-50.655)
O2: (24.408,-31.741,-55.849)
C4': (21.856,-35.432,-53.720)
C2': (23.887,-34.515,-54.549)
O2': (24.128,-35.416,-55.620)
N1: (22.826,-32.273,-54.314)
N3: (23.864,-30.140,-54.335)
N4: (23.275,-28.564,-52.784)
C6: (22.063,-31.909,-53.237)
C5: (22.178,-30.689,-52.694)
O3': (23.979,-36.473,-53.065)
OP1: (19.473,-35.495,-49.909)
OP2: (19.978,-32.995,-49.890)
C4: (23.119,-29.792,-53.283)
O5': (20.886,-34.466,-51.722)
C3': (23.320,-35.250,-53.342)
C1': (22.713,-33.612,-54.929)
O4': (21.530,-34.225,-54.459)
C5': (20.892,-35.605,-52.571)
P: (19.724,-34.239,-50.655)
O2: (24.408,-31.741,-55.849)
C4': (21.856,-35.432,-53.720)
C2': (23.887,-34.515,-54.549)
O2': (24.128,-35.416,-55.620)
N1: (22.826,-32.273,-54.314)
N3: (23.864,-30.140,-54.335)
N4: (23.275,-28.564,-52.784)
C6: (22.063,-31.909,-53.237)
C5: (22.178,-30.689,-52.694)
O3': (23.979,-36.473,-53.065)
OP1: (14.429,-30.151,-49.233)
OP2: (15.123,-28.499,-51.046)
C3': (18.332,-32.773,-52.329)
C1': (18.034,-31.747,-54.432)
C5': (16.380,-31.470,-51.275)
O4': (16.912,-31.437,-53.635)
C8: (18.855,-29.427,-53.729)
O2': (18.226,-34.129,-54.334)
C6: (21.501,-28.671,-55.914)
C5: (20.430,-29.110,-55.117)
C4: (19.909,-30.355,-55.411)
P: (14.470,-29.774,-50.666)
C4': (16.900,-32.267,-52.446)
C2': (18.752,-32.930,-53.784)
C2: (21.329,-30.674,-57.058)
N1: (21.936,-29.492,-56.896)
N3: (20.316,-31.198,-56.375)
N6: (22.109,-27.493,-55.752)
N7: (19.755,-28.532,-54.052)
N9: (18.896,-30.554,-54.510)
O5': (15.072,-30.973,-51.525)
O3': (18.436,-33.971,-51.578)
OP2: (15.123,-28.499,-51.046)
C3': (18.332,-32.773,-52.329)
C1': (18.034,-31.747,-54.432)
C5': (16.380,-31.470,-51.275)
O4': (16.912,-31.437,-53.635)
C8: (18.855,-29.427,-53.729)
O2': (18.226,-34.129,-54.334)
C6: (21.501,-28.671,-55.914)
C5: (20.430,-29.110,-55.117)
C4: (19.909,-30.355,-55.411)
P: (14.470,-29.774,-50.666)
C4': (16.900,-32.267,-52.446)
C2': (18.752,-32.930,-53.784)
C2: (21.329,-30.674,-57.058)
N1: (21.936,-29.492,-56.896)
N3: (20.316,-31.198,-56.375)
N6: (22.109,-27.493,-55.752)
N7: (19.755,-28.532,-54.052)
N9: (18.896,-30.554,-54.510)
O5': (15.072,-30.973,-51.525)
O3': (18.436,-33.971,-51.578)
Image (generated by PyMOL):