Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1588:A1238
Extra
PDB:
ATOM 1 O3' C A1587 37.030 -65.208 -2.945 1.00 28.76 O
ATOM 2 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 3 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 4 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 5 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
ATOM 6 C5' G A1588 36.539 -68.467 -2.346 1.00 24.78 C
ATOM 7 C4' G A1588 37.190 -69.801 -2.469 1.00 24.55 C
ATOM 8 O4' G A1588 36.168 -70.769 -2.737 1.00 33.75 O
ATOM 9 C3' G A1588 38.184 -69.928 -3.593 1.00 27.77 C
ATOM 10 O3' G A1588 39.165 -70.909 -3.247 1.00 33.32 O
ATOM 11 C2' G A1588 37.317 -70.407 -4.775 1.00 33.11 C
ATOM 12 O2' G A1588 37.990 -71.193 -5.760 1.00 33.90 O
ATOM 13 C1' G A1588 36.212 -71.195 -4.092 1.00 33.66 C
ATOM 14 N9 G A1588 34.904 -70.919 -4.638 1.00 27.67 N
ATOM 15 C8 G A1588 34.531 -69.779 -5.269 1.00 27.48 C
ATOM 16 N7 G A1588 33.265 -69.764 -5.571 1.00 36.18 N
ATOM 17 C5 G A1588 32.782 -70.955 -5.057 1.00 37.84 C
ATOM 18 C6 G A1588 31.473 -71.488 -5.056 1.00 32.26 C
ATOM 19 O6 G A1588 30.475 -70.980 -5.550 1.00 34.03 O
ATOM 20 N1 G A1588 31.410 -72.732 -4.426 1.00 38.62 N
ATOM 21 C2 G A1588 32.494 -73.379 -3.859 1.00 43.69 C
ATOM 22 N2 G A1588 32.257 -74.575 -3.294 1.00 40.28 N
ATOM 23 N3 G A1588 33.726 -72.884 -3.840 1.00 40.39 N
ATOM 24 C4 G A1588 33.789 -71.681 -4.461 1.00 37.75 C
ATOM 25 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 26 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 27 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 28 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
TER
ATOM 1 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 2 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 3 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 4 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 5 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
ATOM 6 C5' C B1238 27.345 -74.960 -4.259 1.00 34.58 C
ATOM 7 C4' C B1238 26.019 -75.493 -4.727 1.00 30.31 C
ATOM 8 O4' C B1238 26.026 -76.930 -4.659 1.00 37.26 O
ATOM 9 C3' C B1238 24.816 -75.073 -3.899 1.00 31.07 C
ATOM 10 O3' C B1238 24.299 -73.846 -4.322 1.00 39.70 O
ATOM 11 C2' C B1238 23.841 -76.203 -4.090 1.00 33.09 C
ATOM 12 O2' C B1238 23.139 -76.042 -5.309 1.00 37.72 O
ATOM 13 C1' C B1238 24.774 -77.400 -4.222 1.00 39.39 C
ATOM 14 N1 C B1238 24.958 -78.102 -2.942 1.00 38.88 N
ATOM 15 C2 C B1238 23.867 -78.774 -2.405 1.00 43.05 C
ATOM 16 O2 C B1238 22.787 -78.741 -3.015 1.00 42.62 O
ATOM 17 N3 C B1238 24.009 -79.425 -1.230 1.00 44.84 N
ATOM 18 C4 C B1238 25.184 -79.428 -0.614 1.00 41.00 C
ATOM 19 N4 C B1238 25.274 -80.083 0.539 1.00 44.89 N
ATOM 20 C5 C B1238 26.316 -78.764 -1.158 1.00 41.77 C
ATOM 21 C6 C B1238 26.160 -78.113 -2.312 1.00 36.53 C
ATOM 22 P C B1239 23.552 -72.887 -3.298 1.00 39.36 P
ATOM 23 OP1 C B1239 23.405 -71.582 -3.976 1.00 31.56 O
ATOM 24 OP2 C B1239 24.283 -72.933 -2.016 1.00 38.93 O
ATOM 25 O5' C B1239 22.142 -73.595 -3.146 1.00 41.83 O
TER
ATOM 2 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 3 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 4 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 5 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
ATOM 6 C5' G A1588 36.539 -68.467 -2.346 1.00 24.78 C
ATOM 7 C4' G A1588 37.190 -69.801 -2.469 1.00 24.55 C
ATOM 8 O4' G A1588 36.168 -70.769 -2.737 1.00 33.75 O
ATOM 9 C3' G A1588 38.184 -69.928 -3.593 1.00 27.77 C
ATOM 10 O3' G A1588 39.165 -70.909 -3.247 1.00 33.32 O
ATOM 11 C2' G A1588 37.317 -70.407 -4.775 1.00 33.11 C
ATOM 12 O2' G A1588 37.990 -71.193 -5.760 1.00 33.90 O
ATOM 13 C1' G A1588 36.212 -71.195 -4.092 1.00 33.66 C
ATOM 14 N9 G A1588 34.904 -70.919 -4.638 1.00 27.67 N
ATOM 15 C8 G A1588 34.531 -69.779 -5.269 1.00 27.48 C
ATOM 16 N7 G A1588 33.265 -69.764 -5.571 1.00 36.18 N
ATOM 17 C5 G A1588 32.782 -70.955 -5.057 1.00 37.84 C
ATOM 18 C6 G A1588 31.473 -71.488 -5.056 1.00 32.26 C
ATOM 19 O6 G A1588 30.475 -70.980 -5.550 1.00 34.03 O
ATOM 20 N1 G A1588 31.410 -72.732 -4.426 1.00 38.62 N
ATOM 21 C2 G A1588 32.494 -73.379 -3.859 1.00 43.69 C
ATOM 22 N2 G A1588 32.257 -74.575 -3.294 1.00 40.28 N
ATOM 23 N3 G A1588 33.726 -72.884 -3.840 1.00 40.39 N
ATOM 24 C4 G A1588 33.789 -71.681 -4.461 1.00 37.75 C
ATOM 25 P C A1589 40.648 -70.451 -2.785 1.00 29.60 P
ATOM 26 OP1 C A1589 40.675 -68.963 -2.701 1.00 28.51 O
ATOM 27 OP2 C A1589 41.610 -71.122 -3.695 1.00 27.36 O
ATOM 28 O5' C A1589 40.740 -71.051 -1.328 1.00 25.22 O
TER
ATOM 1 O3' U B1237 29.788 -74.978 -1.966 1.00 29.63 O
ATOM 2 P C B1238 28.479 -74.040 -2.078 1.00 37.49 P
ATOM 3 OP1 C B1238 28.832 -72.885 -2.928 1.00 24.81 O
ATOM 4 OP2 C B1238 28.008 -73.782 -0.697 1.00 26.66 O
ATOM 5 O5' C B1238 27.440 -74.976 -2.841 1.00 37.72 O
ATOM 6 C5' C B1238 27.345 -74.960 -4.259 1.00 34.58 C
ATOM 7 C4' C B1238 26.019 -75.493 -4.727 1.00 30.31 C
ATOM 8 O4' C B1238 26.026 -76.930 -4.659 1.00 37.26 O
ATOM 9 C3' C B1238 24.816 -75.073 -3.899 1.00 31.07 C
ATOM 10 O3' C B1238 24.299 -73.846 -4.322 1.00 39.70 O
ATOM 11 C2' C B1238 23.841 -76.203 -4.090 1.00 33.09 C
ATOM 12 O2' C B1238 23.139 -76.042 -5.309 1.00 37.72 O
ATOM 13 C1' C B1238 24.774 -77.400 -4.222 1.00 39.39 C
ATOM 14 N1 C B1238 24.958 -78.102 -2.942 1.00 38.88 N
ATOM 15 C2 C B1238 23.867 -78.774 -2.405 1.00 43.05 C
ATOM 16 O2 C B1238 22.787 -78.741 -3.015 1.00 42.62 O
ATOM 17 N3 C B1238 24.009 -79.425 -1.230 1.00 44.84 N
ATOM 18 C4 C B1238 25.184 -79.428 -0.614 1.00 41.00 C
ATOM 19 N4 C B1238 25.274 -80.083 0.539 1.00 44.89 N
ATOM 20 C5 C B1238 26.316 -78.764 -1.158 1.00 41.77 C
ATOM 21 C6 C B1238 26.160 -78.113 -2.312 1.00 36.53 C
ATOM 22 P C B1239 23.552 -72.887 -3.298 1.00 39.36 P
ATOM 23 OP1 C B1239 23.405 -71.582 -3.976 1.00 31.56 O
ATOM 24 OP2 C B1239 24.283 -72.933 -2.016 1.00 38.93 O
ATOM 25 O5' C B1239 22.142 -73.595 -3.146 1.00 41.83 O
TER
Atoms:
OP1: (39.344,-66.073,-2.859)
OP2: (37.658,-67.052,-4.475)
C3': (38.184,-69.928,-3.593)
C1': (36.212,-71.195,-4.092)
C5': (36.539,-68.467,-2.346)
O6: (30.475,-70.980,-5.550)
O4': (36.168,-70.769,-2.737)
C8: (34.531,-69.779,-5.269)
C2: (32.494,-73.379,-3.859)
C6: (31.473,-71.488,-5.056)
C5: (32.782,-70.955,-5.057)
C4: (33.789,-71.681,-4.461)
P: (37.962,-66.489,-3.142)
C4': (37.190,-69.801,-2.469)
C2': (37.317,-70.407,-4.775)
O2': (37.990,-71.193,-5.760)
N1: (31.410,-72.732,-4.426)
N2: (32.257,-74.575,-3.294)
N3: (33.726,-72.884,-3.840)
N7: (33.265,-69.764,-5.571)
N9: (34.904,-70.919,-4.638)
O5': (37.467,-67.469,-2.027)
O3': (39.165,-70.909,-3.247)
OP2: (37.658,-67.052,-4.475)
C3': (38.184,-69.928,-3.593)
C1': (36.212,-71.195,-4.092)
C5': (36.539,-68.467,-2.346)
O6: (30.475,-70.980,-5.550)
O4': (36.168,-70.769,-2.737)
C8: (34.531,-69.779,-5.269)
C2: (32.494,-73.379,-3.859)
C6: (31.473,-71.488,-5.056)
C5: (32.782,-70.955,-5.057)
C4: (33.789,-71.681,-4.461)
P: (37.962,-66.489,-3.142)
C4': (37.190,-69.801,-2.469)
C2': (37.317,-70.407,-4.775)
O2': (37.990,-71.193,-5.760)
N1: (31.410,-72.732,-4.426)
N2: (32.257,-74.575,-3.294)
N3: (33.726,-72.884,-3.840)
N7: (33.265,-69.764,-5.571)
N9: (34.904,-70.919,-4.638)
O5': (37.467,-67.469,-2.027)
O3': (39.165,-70.909,-3.247)
C2: (23.867,-78.774,-2.405)
OP1: (28.832,-72.885,-2.928)
OP2: (28.008,-73.782,-0.697)
C4: (25.184,-79.428,-0.614)
O5': (27.440,-74.976,-2.841)
C3': (24.816,-75.073,-3.899)
C1': (24.774,-77.400,-4.222)
O4': (26.026,-76.930,-4.659)
C5': (27.345,-74.960,-4.259)
P: (28.479,-74.040,-2.078)
O2: (22.787,-78.741,-3.015)
C4': (26.019,-75.493,-4.727)
C2': (23.841,-76.203,-4.090)
O2': (23.139,-76.042,-5.309)
N1: (24.958,-78.102,-2.942)
N3: (24.009,-79.425,-1.230)
N4: (25.274,-80.083,0.539)
C6: (26.160,-78.113,-2.312)
C5: (26.316,-78.764,-1.158)
O3': (24.299,-73.846,-4.322)
OP1: (28.832,-72.885,-2.928)
OP2: (28.008,-73.782,-0.697)
C4: (25.184,-79.428,-0.614)
O5': (27.440,-74.976,-2.841)
C3': (24.816,-75.073,-3.899)
C1': (24.774,-77.400,-4.222)
O4': (26.026,-76.930,-4.659)
C5': (27.345,-74.960,-4.259)
P: (28.479,-74.040,-2.078)
O2: (22.787,-78.741,-3.015)
C4': (26.019,-75.493,-4.727)
C2': (23.841,-76.203,-4.090)
O2': (23.139,-76.042,-5.309)
N1: (24.958,-78.102,-2.942)
N3: (24.009,-79.425,-1.230)
N4: (25.274,-80.083,0.539)
C6: (26.160,-78.113,-2.312)
C5: (26.316,-78.764,-1.158)
O3': (24.299,-73.846,-4.322)
Image (generated by PyMOL):