Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1588:A1238
Extra
PDB:
ATOM 1 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 2 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 3 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 4 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 5 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
ATOM 6 C5' G A1588 36.826 -68.396 -2.123 1.00 22.63 C
ATOM 7 C4' G A1588 37.454 -69.737 -2.308 1.00 25.05 C
ATOM 8 O4' G A1588 36.409 -70.685 -2.620 1.00 36.88 O
ATOM 9 C3' G A1588 38.448 -69.824 -3.445 1.00 27.63 C
ATOM 10 O3' G A1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 11 C2' G A1588 37.564 -70.235 -4.649 1.00 27.19 C
ATOM 12 O2' G A1588 38.203 -71.001 -5.654 1.00 27.47 O
ATOM 13 C1' G A1588 36.432 -71.022 -4.005 1.00 33.02 C
ATOM 14 N9 G A1588 35.119 -70.679 -4.538 1.00 30.11 N
ATOM 15 C8 G A1588 34.725 -69.523 -5.134 1.00 23.96 C
ATOM 16 N7 G A1588 33.464 -69.519 -5.440 1.00 26.61 N
ATOM 17 C5 G A1588 32.988 -70.739 -4.973 1.00 33.22 C
ATOM 18 C6 G A1588 31.681 -71.322 -4.973 1.00 35.01 C
ATOM 19 O6 G A1588 30.619 -70.856 -5.429 1.00 40.74 O
ATOM 20 N1 G A1588 31.680 -72.590 -4.382 1.00 30.83 N
ATOM 21 C2 G A1588 32.786 -73.211 -3.860 1.00 34.41 C
ATOM 22 N2 G A1588 32.626 -74.426 -3.334 1.00 36.65 N
ATOM 23 N3 G A1588 33.986 -72.675 -3.837 1.00 39.71 N
ATOM 24 C4 G A1588 34.009 -71.456 -4.406 1.00 36.51 C
ATOM 25 P C A1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 26 OP1 C A1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 27 OP2 C A1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 28 O5' C A1589 40.979 -70.968 -1.192 1.00 23.33 O
TER
ATOM 1 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 2 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 3 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 4 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 5 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
ATOM 6 C5' C B1238 27.484 -74.628 -4.099 1.00 28.02 C
ATOM 7 C4' C B1238 26.238 -75.312 -4.600 1.00 33.29 C
ATOM 8 O4' C B1238 26.363 -76.738 -4.431 1.00 42.83 O
ATOM 9 C3' C B1238 24.952 -74.962 -3.880 1.00 29.21 C
ATOM 10 O3' C B1238 24.365 -73.788 -4.380 1.00 31.63 O
ATOM 11 C2' C B1238 24.089 -76.183 -4.103 1.00 31.52 C
ATOM 12 O2' C B1238 23.494 -76.133 -5.382 1.00 32.90 O
ATOM 13 C1' C B1238 25.120 -77.299 -4.099 1.00 32.95 C
ATOM 14 N1 C B1238 25.240 -77.940 -2.789 1.00 39.83 N
ATOM 15 C2 C B1238 24.125 -78.604 -2.278 1.00 41.75 C
ATOM 16 O2 C B1238 23.089 -78.583 -2.961 1.00 42.43 O
ATOM 17 N3 C B1238 24.212 -79.223 -1.075 1.00 38.22 N
ATOM 18 C4 C B1238 25.372 -79.188 -0.423 1.00 39.72 C
ATOM 19 N4 C B1238 25.438 -79.790 0.757 1.00 47.66 N
ATOM 20 C5 C B1238 26.526 -78.527 -0.932 1.00 39.55 C
ATOM 21 C6 C B1238 26.421 -77.918 -2.114 1.00 35.94 C
ATOM 22 P C B1239 23.702 -72.740 -3.376 1.00 37.21 P
ATOM 23 OP1 C B1239 23.599 -71.449 -4.094 1.00 26.13 O
ATOM 24 OP2 C B1239 24.470 -72.790 -2.107 1.00 33.69 O
ATOM 25 O5' C B1239 22.257 -73.359 -3.153 1.00 49.59 O
TER
ATOM 2 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 3 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 4 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 5 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
ATOM 6 C5' G A1588 36.826 -68.396 -2.123 1.00 22.63 C
ATOM 7 C4' G A1588 37.454 -69.737 -2.308 1.00 25.05 C
ATOM 8 O4' G A1588 36.409 -70.685 -2.620 1.00 36.88 O
ATOM 9 C3' G A1588 38.448 -69.824 -3.445 1.00 27.63 C
ATOM 10 O3' G A1588 39.430 -70.832 -3.152 1.00 30.22 O
ATOM 11 C2' G A1588 37.564 -70.235 -4.649 1.00 27.19 C
ATOM 12 O2' G A1588 38.203 -71.001 -5.654 1.00 27.47 O
ATOM 13 C1' G A1588 36.432 -71.022 -4.005 1.00 33.02 C
ATOM 14 N9 G A1588 35.119 -70.679 -4.538 1.00 30.11 N
ATOM 15 C8 G A1588 34.725 -69.523 -5.134 1.00 23.96 C
ATOM 16 N7 G A1588 33.464 -69.519 -5.440 1.00 26.61 N
ATOM 17 C5 G A1588 32.988 -70.739 -4.973 1.00 33.22 C
ATOM 18 C6 G A1588 31.681 -71.322 -4.973 1.00 35.01 C
ATOM 19 O6 G A1588 30.619 -70.856 -5.429 1.00 40.74 O
ATOM 20 N1 G A1588 31.680 -72.590 -4.382 1.00 30.83 N
ATOM 21 C2 G A1588 32.786 -73.211 -3.860 1.00 34.41 C
ATOM 22 N2 G A1588 32.626 -74.426 -3.334 1.00 36.65 N
ATOM 23 N3 G A1588 33.986 -72.675 -3.837 1.00 39.71 N
ATOM 24 C4 G A1588 34.009 -71.456 -4.406 1.00 36.51 C
ATOM 25 P C A1589 40.920 -70.409 -2.673 1.00 23.90 P
ATOM 26 OP1 C A1589 40.988 -68.931 -2.645 1.00 28.50 O
ATOM 27 OP2 C A1589 41.865 -71.126 -3.525 1.00 33.36 O
ATOM 28 O5' C A1589 40.979 -70.968 -1.192 1.00 23.33 O
TER
ATOM 1 O3' U B1237 29.928 -74.864 -1.859 1.00 27.46 O
ATOM 2 P C B1238 28.677 -73.885 -1.875 1.00 44.64 P
ATOM 3 OP1 C B1238 29.067 -72.670 -2.630 1.00 29.29 O
ATOM 4 OP2 C B1238 28.242 -73.739 -0.465 1.00 44.45 O
ATOM 5 O5' C B1238 27.587 -74.721 -2.693 1.00 38.27 O
ATOM 6 C5' C B1238 27.484 -74.628 -4.099 1.00 28.02 C
ATOM 7 C4' C B1238 26.238 -75.312 -4.600 1.00 33.29 C
ATOM 8 O4' C B1238 26.363 -76.738 -4.431 1.00 42.83 O
ATOM 9 C3' C B1238 24.952 -74.962 -3.880 1.00 29.21 C
ATOM 10 O3' C B1238 24.365 -73.788 -4.380 1.00 31.63 O
ATOM 11 C2' C B1238 24.089 -76.183 -4.103 1.00 31.52 C
ATOM 12 O2' C B1238 23.494 -76.133 -5.382 1.00 32.90 O
ATOM 13 C1' C B1238 25.120 -77.299 -4.099 1.00 32.95 C
ATOM 14 N1 C B1238 25.240 -77.940 -2.789 1.00 39.83 N
ATOM 15 C2 C B1238 24.125 -78.604 -2.278 1.00 41.75 C
ATOM 16 O2 C B1238 23.089 -78.583 -2.961 1.00 42.43 O
ATOM 17 N3 C B1238 24.212 -79.223 -1.075 1.00 38.22 N
ATOM 18 C4 C B1238 25.372 -79.188 -0.423 1.00 39.72 C
ATOM 19 N4 C B1238 25.438 -79.790 0.757 1.00 47.66 N
ATOM 20 C5 C B1238 26.526 -78.527 -0.932 1.00 39.55 C
ATOM 21 C6 C B1238 26.421 -77.918 -2.114 1.00 35.94 C
ATOM 22 P C B1239 23.702 -72.740 -3.376 1.00 37.21 P
ATOM 23 OP1 C B1239 23.599 -71.449 -4.094 1.00 26.13 O
ATOM 24 OP2 C B1239 24.470 -72.790 -2.107 1.00 33.69 O
ATOM 25 O5' C B1239 22.257 -73.359 -3.153 1.00 49.59 O
TER
Atoms:
OP1: (39.504,-65.894,-2.927)
OP2: (37.787,-67.030,-4.399)
C3': (38.448,-69.824,-3.445)
C1': (36.432,-71.022,-4.005)
C5': (36.826,-68.396,-2.123)
O6: (30.619,-70.856,-5.429)
O4': (36.409,-70.685,-2.620)
C8: (34.725,-69.523,-5.134)
C2: (32.786,-73.211,-3.860)
C6: (31.681,-71.322,-4.973)
C5: (32.988,-70.739,-4.973)
C4: (34.009,-71.456,-4.406)
P: (38.137,-66.419,-3.103)
C4': (37.454,-69.737,-2.308)
C2': (37.564,-70.235,-4.649)
O2': (38.203,-71.001,-5.654)
N1: (31.680,-72.590,-4.382)
N2: (32.626,-74.426,-3.334)
N3: (33.986,-72.675,-3.837)
N7: (33.464,-69.519,-5.440)
N9: (35.119,-70.679,-4.538)
O5': (37.792,-67.406,-1.939)
O3': (39.430,-70.832,-3.152)
OP2: (37.787,-67.030,-4.399)
C3': (38.448,-69.824,-3.445)
C1': (36.432,-71.022,-4.005)
C5': (36.826,-68.396,-2.123)
O6: (30.619,-70.856,-5.429)
O4': (36.409,-70.685,-2.620)
C8: (34.725,-69.523,-5.134)
C2: (32.786,-73.211,-3.860)
C6: (31.681,-71.322,-4.973)
C5: (32.988,-70.739,-4.973)
C4: (34.009,-71.456,-4.406)
P: (38.137,-66.419,-3.103)
C4': (37.454,-69.737,-2.308)
C2': (37.564,-70.235,-4.649)
O2': (38.203,-71.001,-5.654)
N1: (31.680,-72.590,-4.382)
N2: (32.626,-74.426,-3.334)
N3: (33.986,-72.675,-3.837)
N7: (33.464,-69.519,-5.440)
N9: (35.119,-70.679,-4.538)
O5': (37.792,-67.406,-1.939)
O3': (39.430,-70.832,-3.152)
C2: (24.125,-78.604,-2.278)
OP1: (29.067,-72.670,-2.630)
OP2: (28.242,-73.739,-0.465)
C4: (25.372,-79.188,-0.423)
O5': (27.587,-74.721,-2.693)
C3': (24.952,-74.962,-3.880)
C1': (25.120,-77.299,-4.099)
O4': (26.363,-76.738,-4.431)
C5': (27.484,-74.628,-4.099)
P: (28.677,-73.885,-1.875)
O2: (23.089,-78.583,-2.961)
C4': (26.238,-75.312,-4.600)
C2': (24.089,-76.183,-4.103)
O2': (23.494,-76.133,-5.382)
N1: (25.240,-77.940,-2.789)
N3: (24.212,-79.223,-1.075)
N4: (25.438,-79.790,0.757)
C6: (26.421,-77.918,-2.114)
C5: (26.526,-78.527,-0.932)
O3': (24.365,-73.788,-4.380)
OP1: (29.067,-72.670,-2.630)
OP2: (28.242,-73.739,-0.465)
C4: (25.372,-79.188,-0.423)
O5': (27.587,-74.721,-2.693)
C3': (24.952,-74.962,-3.880)
C1': (25.120,-77.299,-4.099)
O4': (26.363,-76.738,-4.431)
C5': (27.484,-74.628,-4.099)
P: (28.677,-73.885,-1.875)
O2: (23.089,-78.583,-2.961)
C4': (26.238,-75.312,-4.600)
C2': (24.089,-76.183,-4.103)
O2': (23.494,-76.133,-5.382)
N1: (25.240,-77.940,-2.789)
N3: (24.212,-79.223,-1.075)
N4: (25.438,-79.790,0.757)
C6: (26.421,-77.918,-2.114)
C5: (26.526,-78.527,-0.932)
O3': (24.365,-73.788,-4.380)
Image (generated by PyMOL):