Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0244:0243
Extra
PDB:
ATOM 1 O3' A A 243 83.434 142.146 -9.158 1.00 83.63 O
ATOM 2 P C A 244 84.782 141.284 -8.996 1.00 85.14 P
ATOM 3 OP1 C A 244 85.013 140.603 -10.298 1.00 84.09 O
ATOM 4 OP2 C A 244 84.679 140.475 -7.755 1.00 86.38 O
ATOM 5 O5' C A 244 85.931 142.371 -8.772 1.00 83.26 O
ATOM 6 C5' C A 244 86.365 143.232 -9.844 1.00 80.29 C
ATOM 7 C4' C A 244 87.271 144.319 -9.311 1.00 78.69 C
ATOM 8 O4' C A 244 86.548 145.109 -8.330 1.00 78.14 O
ATOM 9 C3' C A 244 88.513 143.851 -8.568 1.00 78.34 C
ATOM 10 O3' C A 244 89.577 143.559 -9.464 1.00 76.58 O
ATOM 11 C2' C A 244 88.844 145.060 -7.704 1.00 78.93 C
ATOM 12 O2' C A 244 89.515 146.075 -8.423 1.00 79.18 O
ATOM 13 C1' C A 244 87.446 145.554 -7.325 1.00 79.33 C
ATOM 14 N1 C A 244 86.980 145.062 -6.012 1.00 81.31 N
ATOM 15 C2 C A 244 87.490 145.659 -4.842 1.00 81.77 C
ATOM 16 O2 C A 244 88.336 146.566 -4.941 1.00 80.99 O
ATOM 17 N3 C A 244 87.052 145.226 -3.635 1.00 81.77 N
ATOM 18 C4 C A 244 86.152 144.242 -3.565 1.00 81.78 C
ATOM 19 N4 C A 244 85.740 143.858 -2.353 1.00 82.17 N
ATOM 20 C5 C A 244 85.629 143.611 -4.733 1.00 81.75 C
ATOM 21 C6 C A 244 86.064 144.048 -5.922 1.00 81.52 C
ATOM 22 P G A 245 90.417 142.198 -9.299 1.00 76.99 P
ATOM 23 OP1 G A 245 91.602 142.313 -10.188 1.00 77.34 O
ATOM 24 OP2 G A 245 89.491 141.046 -9.450 1.00 76.78 O
ATOM 25 O5' G A 245 90.942 142.215 -7.796 1.00 76.20 O
TER
ATOM 1 O3' C B 242 78.669 141.915 -5.150 1.00 83.63 O
ATOM 2 P A B 243 80.084 141.154 -5.164 1.00 85.60 P
ATOM 3 OP1 A B 243 79.871 139.811 -5.772 1.00 85.44 O
ATOM 4 OP2 A B 243 80.662 141.261 -3.796 1.00 85.27 O
ATOM 5 O5' A B 243 80.989 142.025 -6.149 1.00 85.33 O
ATOM 6 C5' A B 243 80.626 142.213 -7.538 1.00 84.40 C
ATOM 7 C4' A B 243 81.512 143.263 -8.176 1.00 83.20 C
ATOM 8 O4' A B 243 81.342 144.525 -7.479 1.00 83.16 O
ATOM 9 C3' A B 243 83.007 142.998 -8.102 1.00 83.27 C
ATOM 10 O3' A B 243 83.434 142.146 -9.158 1.00 83.63 O
ATOM 11 C2' A B 243 83.594 144.396 -8.233 1.00 83.38 C
ATOM 12 O2' A B 243 83.614 144.846 -9.571 1.00 83.65 O
ATOM 13 C1' A B 243 82.576 145.226 -7.449 1.00 83.11 C
ATOM 14 N9 A B 243 82.946 145.474 -6.052 1.00 83.14 N
ATOM 15 C8 A B 243 82.513 144.817 -4.925 1.00 83.31 C
ATOM 16 N7 A B 243 83.013 145.292 -3.810 1.00 82.74 N
ATOM 17 C5 A B 243 83.834 146.329 -4.228 1.00 82.91 C
ATOM 18 C6 A B 243 84.653 147.232 -3.523 1.00 83.02 C
ATOM 19 N6 A B 243 84.778 147.238 -2.195 1.00 82.58 N
ATOM 20 N1 A B 243 85.349 148.140 -4.240 1.00 83.07 N
ATOM 21 C2 A B 243 85.225 148.134 -5.572 1.00 83.22 C
ATOM 22 N3 A B 243 84.489 147.339 -6.348 1.00 83.82 N
ATOM 23 C4 A B 243 83.810 146.448 -5.606 1.00 83.31 C
ATOM 24 P C B 244 84.782 141.284 -8.996 1.00 85.14 P
ATOM 25 OP1 C B 244 85.013 140.603 -10.298 1.00 84.09 O
ATOM 26 OP2 C B 244 84.679 140.475 -7.755 1.00 86.38 O
ATOM 27 O5' C B 244 85.931 142.371 -8.772 1.00 83.26 O
TER
ATOM 2 P C A 244 84.782 141.284 -8.996 1.00 85.14 P
ATOM 3 OP1 C A 244 85.013 140.603 -10.298 1.00 84.09 O
ATOM 4 OP2 C A 244 84.679 140.475 -7.755 1.00 86.38 O
ATOM 5 O5' C A 244 85.931 142.371 -8.772 1.00 83.26 O
ATOM 6 C5' C A 244 86.365 143.232 -9.844 1.00 80.29 C
ATOM 7 C4' C A 244 87.271 144.319 -9.311 1.00 78.69 C
ATOM 8 O4' C A 244 86.548 145.109 -8.330 1.00 78.14 O
ATOM 9 C3' C A 244 88.513 143.851 -8.568 1.00 78.34 C
ATOM 10 O3' C A 244 89.577 143.559 -9.464 1.00 76.58 O
ATOM 11 C2' C A 244 88.844 145.060 -7.704 1.00 78.93 C
ATOM 12 O2' C A 244 89.515 146.075 -8.423 1.00 79.18 O
ATOM 13 C1' C A 244 87.446 145.554 -7.325 1.00 79.33 C
ATOM 14 N1 C A 244 86.980 145.062 -6.012 1.00 81.31 N
ATOM 15 C2 C A 244 87.490 145.659 -4.842 1.00 81.77 C
ATOM 16 O2 C A 244 88.336 146.566 -4.941 1.00 80.99 O
ATOM 17 N3 C A 244 87.052 145.226 -3.635 1.00 81.77 N
ATOM 18 C4 C A 244 86.152 144.242 -3.565 1.00 81.78 C
ATOM 19 N4 C A 244 85.740 143.858 -2.353 1.00 82.17 N
ATOM 20 C5 C A 244 85.629 143.611 -4.733 1.00 81.75 C
ATOM 21 C6 C A 244 86.064 144.048 -5.922 1.00 81.52 C
ATOM 22 P G A 245 90.417 142.198 -9.299 1.00 76.99 P
ATOM 23 OP1 G A 245 91.602 142.313 -10.188 1.00 77.34 O
ATOM 24 OP2 G A 245 89.491 141.046 -9.450 1.00 76.78 O
ATOM 25 O5' G A 245 90.942 142.215 -7.796 1.00 76.20 O
TER
ATOM 1 O3' C B 242 78.669 141.915 -5.150 1.00 83.63 O
ATOM 2 P A B 243 80.084 141.154 -5.164 1.00 85.60 P
ATOM 3 OP1 A B 243 79.871 139.811 -5.772 1.00 85.44 O
ATOM 4 OP2 A B 243 80.662 141.261 -3.796 1.00 85.27 O
ATOM 5 O5' A B 243 80.989 142.025 -6.149 1.00 85.33 O
ATOM 6 C5' A B 243 80.626 142.213 -7.538 1.00 84.40 C
ATOM 7 C4' A B 243 81.512 143.263 -8.176 1.00 83.20 C
ATOM 8 O4' A B 243 81.342 144.525 -7.479 1.00 83.16 O
ATOM 9 C3' A B 243 83.007 142.998 -8.102 1.00 83.27 C
ATOM 10 O3' A B 243 83.434 142.146 -9.158 1.00 83.63 O
ATOM 11 C2' A B 243 83.594 144.396 -8.233 1.00 83.38 C
ATOM 12 O2' A B 243 83.614 144.846 -9.571 1.00 83.65 O
ATOM 13 C1' A B 243 82.576 145.226 -7.449 1.00 83.11 C
ATOM 14 N9 A B 243 82.946 145.474 -6.052 1.00 83.14 N
ATOM 15 C8 A B 243 82.513 144.817 -4.925 1.00 83.31 C
ATOM 16 N7 A B 243 83.013 145.292 -3.810 1.00 82.74 N
ATOM 17 C5 A B 243 83.834 146.329 -4.228 1.00 82.91 C
ATOM 18 C6 A B 243 84.653 147.232 -3.523 1.00 83.02 C
ATOM 19 N6 A B 243 84.778 147.238 -2.195 1.00 82.58 N
ATOM 20 N1 A B 243 85.349 148.140 -4.240 1.00 83.07 N
ATOM 21 C2 A B 243 85.225 148.134 -5.572 1.00 83.22 C
ATOM 22 N3 A B 243 84.489 147.339 -6.348 1.00 83.82 N
ATOM 23 C4 A B 243 83.810 146.448 -5.606 1.00 83.31 C
ATOM 24 P C B 244 84.782 141.284 -8.996 1.00 85.14 P
ATOM 25 OP1 C B 244 85.013 140.603 -10.298 1.00 84.09 O
ATOM 26 OP2 C B 244 84.679 140.475 -7.755 1.00 86.38 O
ATOM 27 O5' C B 244 85.931 142.371 -8.772 1.00 83.26 O
TER
Atoms:
C2: (87.490,145.659,-4.842)
OP1: (85.013,140.603,-10.298)
OP2: (84.679,140.475,-7.755)
C4: (86.152,144.242,-3.565)
O5': (85.931,142.371,-8.772)
C3': (88.513,143.851,-8.568)
C1': (87.446,145.554,-7.325)
O4': (86.548,145.109,-8.330)
C5': (86.365,143.232,-9.844)
P: (84.782,141.284,-8.996)
O2: (88.336,146.566,-4.941)
C4': (87.271,144.319,-9.311)
C2': (88.844,145.060,-7.704)
O2': (89.515,146.075,-8.423)
N1: (86.980,145.062,-6.012)
N3: (87.052,145.226,-3.635)
N4: (85.740,143.858,-2.353)
C6: (86.064,144.048,-5.922)
C5: (85.629,143.611,-4.733)
O3': (89.577,143.559,-9.464)
OP1: (85.013,140.603,-10.298)
OP2: (84.679,140.475,-7.755)
C4: (86.152,144.242,-3.565)
O5': (85.931,142.371,-8.772)
C3': (88.513,143.851,-8.568)
C1': (87.446,145.554,-7.325)
O4': (86.548,145.109,-8.330)
C5': (86.365,143.232,-9.844)
P: (84.782,141.284,-8.996)
O2: (88.336,146.566,-4.941)
C4': (87.271,144.319,-9.311)
C2': (88.844,145.060,-7.704)
O2': (89.515,146.075,-8.423)
N1: (86.980,145.062,-6.012)
N3: (87.052,145.226,-3.635)
N4: (85.740,143.858,-2.353)
C6: (86.064,144.048,-5.922)
C5: (85.629,143.611,-4.733)
O3': (89.577,143.559,-9.464)
OP1: (79.871,139.811,-5.772)
OP2: (80.662,141.261,-3.796)
C3': (83.007,142.998,-8.102)
C1': (82.576,145.226,-7.449)
C5': (80.626,142.213,-7.538)
O4': (81.342,144.525,-7.479)
C8: (82.513,144.817,-4.925)
O2': (83.614,144.846,-9.571)
C6: (84.653,147.232,-3.523)
C5: (83.834,146.329,-4.228)
C4: (83.810,146.448,-5.606)
P: (80.084,141.154,-5.164)
C4': (81.512,143.263,-8.176)
C2': (83.594,144.396,-8.233)
C2: (85.225,148.134,-5.572)
N1: (85.349,148.140,-4.240)
N3: (84.489,147.339,-6.348)
N6: (84.778,147.238,-2.195)
N7: (83.013,145.292,-3.810)
N9: (82.946,145.474,-6.052)
O5': (80.989,142.025,-6.149)
O3': (83.434,142.146,-9.158)
OP2: (80.662,141.261,-3.796)
C3': (83.007,142.998,-8.102)
C1': (82.576,145.226,-7.449)
C5': (80.626,142.213,-7.538)
O4': (81.342,144.525,-7.479)
C8: (82.513,144.817,-4.925)
O2': (83.614,144.846,-9.571)
C6: (84.653,147.232,-3.523)
C5: (83.834,146.329,-4.228)
C4: (83.810,146.448,-5.606)
P: (80.084,141.154,-5.164)
C4': (81.512,143.263,-8.176)
C2': (83.594,144.396,-8.233)
C2: (85.225,148.134,-5.572)
N1: (85.349,148.140,-4.240)
N3: (84.489,147.339,-6.348)
N6: (84.778,147.238,-2.195)
N7: (83.013,145.292,-3.810)
N9: (82.946,145.474,-6.052)
O5': (80.989,142.025,-6.149)
O3': (83.434,142.146,-9.158)
Image (generated by PyMOL):