Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01840:01839
Extra
PDB:
ATOM 1 O3' A A1839 105.752 122.943 77.816 1.00 37.65 O
ATOM 2 P C A1840 105.142 123.924 78.916 1.00 38.60 P
ATOM 3 OP1 C A1840 103.795 123.459 79.275 1.00 39.65 O
ATOM 4 OP2 C A1840 105.321 125.309 78.432 1.00 40.01 O
ATOM 5 O5' C A1840 106.086 123.668 80.164 1.00 38.81 O
ATOM 6 C5' C A1840 106.229 122.347 80.695 1.00 39.34 C
ATOM 7 C4' C A1840 107.484 122.248 81.517 1.00 39.18 C
ATOM 8 O4' C A1840 108.621 122.521 80.664 1.00 40.58 O
ATOM 9 C3' C A1840 107.620 123.255 82.645 1.00 38.65 C
ATOM 10 O3' C A1840 106.930 122.826 83.810 1.00 37.70 O
ATOM 11 C2' C A1840 109.123 123.264 82.856 1.00 40.50 C
ATOM 12 O2' C A1840 109.566 122.099 83.500 1.00 40.95 O
ATOM 13 C1' C A1840 109.624 123.177 81.418 1.00 41.96 C
ATOM 14 N1 C A1840 109.908 124.502 80.831 1.00 43.76 N
ATOM 15 C2 C A1840 111.066 125.152 81.230 1.00 44.32 C
ATOM 16 O2 C A1840 111.800 124.599 82.066 1.00 47.01 O
ATOM 17 N3 C A1840 111.363 126.362 80.706 1.00 44.08 N
ATOM 18 C4 C A1840 110.549 126.919 79.815 1.00 43.89 C
ATOM 19 N4 C A1840 110.891 128.112 79.319 1.00 43.49 N
ATOM 20 C5 C A1840 109.351 126.280 79.391 1.00 43.53 C
ATOM 21 C6 C A1840 109.070 125.085 79.921 1.00 43.39 C
ATOM 22 P U A1841 106.363 123.914 84.847 1.00 36.98 P
ATOM 23 OP1 U A1841 105.635 123.208 85.923 1.00 35.94 O
ATOM 24 OP2 U A1841 105.675 124.955 84.058 1.00 35.91 O
ATOM 25 O5' U A1841 107.664 124.574 85.478 1.00 36.84 O
TER
ATOM 1 O3' C B1838 105.672 123.954 71.042 1.00 37.57 O
ATOM 2 P A B1839 104.858 124.465 72.322 1.00 37.06 P
ATOM 3 OP1 A B1839 103.424 124.209 72.073 1.00 37.11 O
ATOM 4 OP2 A B1839 105.313 125.839 72.651 1.00 37.62 O
ATOM 5 O5' A B1839 105.340 123.466 73.456 1.00 36.68 O
ATOM 6 C5' A B1839 105.481 123.896 74.806 1.00 37.03 C
ATOM 7 C4' A B1839 106.442 122.991 75.521 1.00 38.48 C
ATOM 8 O4' A B1839 107.725 122.997 74.844 1.00 37.55 O
ATOM 9 C3' A B1839 106.749 123.424 76.936 1.00 38.69 C
ATOM 10 O3' A B1839 105.752 122.943 77.816 1.00 37.65 O
ATOM 11 C2' A B1839 108.109 122.797 77.176 1.00 39.86 C
ATOM 12 O2' A B1839 108.008 121.424 77.471 1.00 40.56 O
ATOM 13 C1' A B1839 108.765 122.980 75.804 1.00 40.39 C
ATOM 14 N9 A B1839 109.510 124.239 75.695 1.00 43.59 N
ATOM 15 C8 A B1839 109.272 125.310 74.860 1.00 43.75 C
ATOM 16 N7 A B1839 110.113 126.302 75.019 1.00 44.05 N
ATOM 17 C5 A B1839 110.966 125.859 76.024 1.00 45.23 C
ATOM 18 C6 A B1839 112.073 126.451 76.657 1.00 45.99 C
ATOM 19 N6 A B1839 112.535 127.669 76.364 1.00 47.35 N
ATOM 20 N1 A B1839 112.701 125.739 77.618 1.00 45.42 N
ATOM 21 C2 A B1839 112.244 124.516 77.914 1.00 44.24 C
ATOM 22 N3 A B1839 111.221 123.854 77.394 1.00 44.43 N
ATOM 23 C4 A B1839 110.612 124.589 76.443 1.00 44.83 C
ATOM 24 P C B1840 105.142 123.924 78.916 1.00 38.60 P
ATOM 25 OP1 C B1840 103.795 123.459 79.275 1.00 39.65 O
ATOM 26 OP2 C B1840 105.321 125.309 78.432 1.00 40.01 O
ATOM 27 O5' C B1840 106.086 123.668 80.164 1.00 38.81 O
TER
ATOM 2 P C A1840 105.142 123.924 78.916 1.00 38.60 P
ATOM 3 OP1 C A1840 103.795 123.459 79.275 1.00 39.65 O
ATOM 4 OP2 C A1840 105.321 125.309 78.432 1.00 40.01 O
ATOM 5 O5' C A1840 106.086 123.668 80.164 1.00 38.81 O
ATOM 6 C5' C A1840 106.229 122.347 80.695 1.00 39.34 C
ATOM 7 C4' C A1840 107.484 122.248 81.517 1.00 39.18 C
ATOM 8 O4' C A1840 108.621 122.521 80.664 1.00 40.58 O
ATOM 9 C3' C A1840 107.620 123.255 82.645 1.00 38.65 C
ATOM 10 O3' C A1840 106.930 122.826 83.810 1.00 37.70 O
ATOM 11 C2' C A1840 109.123 123.264 82.856 1.00 40.50 C
ATOM 12 O2' C A1840 109.566 122.099 83.500 1.00 40.95 O
ATOM 13 C1' C A1840 109.624 123.177 81.418 1.00 41.96 C
ATOM 14 N1 C A1840 109.908 124.502 80.831 1.00 43.76 N
ATOM 15 C2 C A1840 111.066 125.152 81.230 1.00 44.32 C
ATOM 16 O2 C A1840 111.800 124.599 82.066 1.00 47.01 O
ATOM 17 N3 C A1840 111.363 126.362 80.706 1.00 44.08 N
ATOM 18 C4 C A1840 110.549 126.919 79.815 1.00 43.89 C
ATOM 19 N4 C A1840 110.891 128.112 79.319 1.00 43.49 N
ATOM 20 C5 C A1840 109.351 126.280 79.391 1.00 43.53 C
ATOM 21 C6 C A1840 109.070 125.085 79.921 1.00 43.39 C
ATOM 22 P U A1841 106.363 123.914 84.847 1.00 36.98 P
ATOM 23 OP1 U A1841 105.635 123.208 85.923 1.00 35.94 O
ATOM 24 OP2 U A1841 105.675 124.955 84.058 1.00 35.91 O
ATOM 25 O5' U A1841 107.664 124.574 85.478 1.00 36.84 O
TER
ATOM 1 O3' C B1838 105.672 123.954 71.042 1.00 37.57 O
ATOM 2 P A B1839 104.858 124.465 72.322 1.00 37.06 P
ATOM 3 OP1 A B1839 103.424 124.209 72.073 1.00 37.11 O
ATOM 4 OP2 A B1839 105.313 125.839 72.651 1.00 37.62 O
ATOM 5 O5' A B1839 105.340 123.466 73.456 1.00 36.68 O
ATOM 6 C5' A B1839 105.481 123.896 74.806 1.00 37.03 C
ATOM 7 C4' A B1839 106.442 122.991 75.521 1.00 38.48 C
ATOM 8 O4' A B1839 107.725 122.997 74.844 1.00 37.55 O
ATOM 9 C3' A B1839 106.749 123.424 76.936 1.00 38.69 C
ATOM 10 O3' A B1839 105.752 122.943 77.816 1.00 37.65 O
ATOM 11 C2' A B1839 108.109 122.797 77.176 1.00 39.86 C
ATOM 12 O2' A B1839 108.008 121.424 77.471 1.00 40.56 O
ATOM 13 C1' A B1839 108.765 122.980 75.804 1.00 40.39 C
ATOM 14 N9 A B1839 109.510 124.239 75.695 1.00 43.59 N
ATOM 15 C8 A B1839 109.272 125.310 74.860 1.00 43.75 C
ATOM 16 N7 A B1839 110.113 126.302 75.019 1.00 44.05 N
ATOM 17 C5 A B1839 110.966 125.859 76.024 1.00 45.23 C
ATOM 18 C6 A B1839 112.073 126.451 76.657 1.00 45.99 C
ATOM 19 N6 A B1839 112.535 127.669 76.364 1.00 47.35 N
ATOM 20 N1 A B1839 112.701 125.739 77.618 1.00 45.42 N
ATOM 21 C2 A B1839 112.244 124.516 77.914 1.00 44.24 C
ATOM 22 N3 A B1839 111.221 123.854 77.394 1.00 44.43 N
ATOM 23 C4 A B1839 110.612 124.589 76.443 1.00 44.83 C
ATOM 24 P C B1840 105.142 123.924 78.916 1.00 38.60 P
ATOM 25 OP1 C B1840 103.795 123.459 79.275 1.00 39.65 O
ATOM 26 OP2 C B1840 105.321 125.309 78.432 1.00 40.01 O
ATOM 27 O5' C B1840 106.086 123.668 80.164 1.00 38.81 O
TER
Atoms:
C2: (111.066,125.152,81.230)
OP1: (103.795,123.459,79.275)
OP2: (105.321,125.309,78.432)
C4: (110.549,126.919,79.815)
O5': (106.086,123.668,80.164)
C3': (107.620,123.255,82.645)
C1': (109.624,123.177,81.418)
O4': (108.621,122.521,80.664)
C5': (106.229,122.347,80.695)
P: (105.142,123.924,78.916)
O2: (111.800,124.599,82.066)
C4': (107.484,122.248,81.517)
C2': (109.123,123.264,82.856)
O2': (109.566,122.099,83.500)
N1: (109.908,124.502,80.831)
N3: (111.363,126.362,80.706)
N4: (110.891,128.112,79.319)
C6: (109.070,125.085,79.921)
C5: (109.351,126.280,79.391)
O3': (106.930,122.826,83.810)
OP1: (103.795,123.459,79.275)
OP2: (105.321,125.309,78.432)
C4: (110.549,126.919,79.815)
O5': (106.086,123.668,80.164)
C3': (107.620,123.255,82.645)
C1': (109.624,123.177,81.418)
O4': (108.621,122.521,80.664)
C5': (106.229,122.347,80.695)
P: (105.142,123.924,78.916)
O2: (111.800,124.599,82.066)
C4': (107.484,122.248,81.517)
C2': (109.123,123.264,82.856)
O2': (109.566,122.099,83.500)
N1: (109.908,124.502,80.831)
N3: (111.363,126.362,80.706)
N4: (110.891,128.112,79.319)
C6: (109.070,125.085,79.921)
C5: (109.351,126.280,79.391)
O3': (106.930,122.826,83.810)
OP1: (103.424,124.209,72.073)
OP2: (105.313,125.839,72.651)
C3': (106.749,123.424,76.936)
C1': (108.765,122.980,75.804)
C5': (105.481,123.896,74.806)
O4': (107.725,122.997,74.844)
C8: (109.272,125.310,74.860)
O2': (108.008,121.424,77.471)
C6: (112.073,126.451,76.657)
C5: (110.966,125.859,76.024)
C4: (110.612,124.589,76.443)
P: (104.858,124.465,72.322)
C4': (106.442,122.991,75.521)
C2': (108.109,122.797,77.176)
C2: (112.244,124.516,77.914)
N1: (112.701,125.739,77.618)
N3: (111.221,123.854,77.394)
N6: (112.535,127.669,76.364)
N7: (110.113,126.302,75.019)
N9: (109.510,124.239,75.695)
O5': (105.340,123.466,73.456)
O3': (105.752,122.943,77.816)
OP2: (105.313,125.839,72.651)
C3': (106.749,123.424,76.936)
C1': (108.765,122.980,75.804)
C5': (105.481,123.896,74.806)
O4': (107.725,122.997,74.844)
C8: (109.272,125.310,74.860)
O2': (108.008,121.424,77.471)
C6: (112.073,126.451,76.657)
C5: (110.966,125.859,76.024)
C4: (110.612,124.589,76.443)
P: (104.858,124.465,72.322)
C4': (106.442,122.991,75.521)
C2': (108.109,122.797,77.176)
C2: (112.244,124.516,77.914)
N1: (112.701,125.739,77.618)
N3: (111.221,123.854,77.394)
N6: (112.535,127.669,76.364)
N7: (110.113,126.302,75.019)
N9: (109.510,124.239,75.695)
O5': (105.340,123.466,73.456)
O3': (105.752,122.943,77.816)
Image (generated by PyMOL):