Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0343:0342
Extra
PDB:
ATOM 1 O3' A A 342 51.529 132.288 17.267 1.00 57.20 O
ATOM 2 P C A 343 52.391 131.265 16.389 1.00 57.05 P
ATOM 3 OP1 C A 343 53.819 131.540 16.673 1.00 58.38 O
ATOM 4 OP2 C A 343 51.897 131.300 14.985 1.00 58.37 O
ATOM 5 O5' C A 343 52.041 129.839 17.001 1.00 58.70 O
ATOM 6 C5' C A 343 52.529 129.454 18.297 1.00 58.54 C
ATOM 7 C4' C A 343 51.946 128.124 18.699 1.00 58.69 C
ATOM 8 O4' C A 343 50.500 128.230 18.759 1.00 60.70 O
ATOM 9 C3' C A 343 52.193 126.976 17.737 1.00 58.66 C
ATOM 10 O3' C A 343 53.466 126.381 17.954 1.00 58.16 O
ATOM 11 C2' C A 343 51.062 126.023 18.087 1.00 59.88 C
ATOM 12 O2' C A 343 51.330 125.314 19.275 1.00 60.12 O
ATOM 13 C1' C A 343 49.916 127.003 18.349 1.00 61.74 C
ATOM 14 N1 C A 343 49.073 127.249 17.160 1.00 64.69 N
ATOM 15 C2 C A 343 48.111 126.287 16.799 1.00 65.47 C
ATOM 16 O2 C A 343 47.991 125.259 17.490 1.00 65.90 O
ATOM 17 N3 C A 343 47.343 126.501 15.708 1.00 65.93 N
ATOM 18 C4 C A 343 47.502 127.613 14.986 1.00 67.06 C
ATOM 19 N4 C A 343 46.724 127.778 13.914 1.00 68.21 N
ATOM 20 C5 C A 343 48.467 128.607 15.330 1.00 66.28 C
ATOM 21 C6 C A 343 49.221 128.388 16.413 1.00 65.01 C
ATOM 22 P C A 344 54.229 125.670 16.737 1.00 57.45 P
ATOM 23 OP1 C A 344 55.505 125.086 17.238 1.00 58.83 O
ATOM 24 OP2 C A 344 54.261 126.640 15.624 1.00 59.91 O
ATOM 25 O5' C A 344 53.265 124.476 16.320 1.00 58.33 O
TER
ATOM 1 O3' G B 341 47.768 136.093 14.305 1.00 65.29 O
ATOM 2 P A B 342 48.804 134.949 13.867 1.00 65.35 P
ATOM 3 OP1 A B 342 50.102 135.621 13.579 1.00 65.11 O
ATOM 4 OP2 A B 342 48.172 134.083 12.834 1.00 64.48 O
ATOM 5 O5' A B 342 48.988 134.082 15.186 1.00 64.72 O
ATOM 6 C5' A B 342 49.585 134.653 16.363 1.00 62.72 C
ATOM 7 C4' A B 342 49.546 133.658 17.491 1.00 61.06 C
ATOM 8 O4' A B 342 48.165 133.383 17.840 1.00 60.45 O
ATOM 9 C3' A B 342 50.119 132.296 17.148 1.00 59.73 C
ATOM 10 O3' A B 342 51.529 132.288 17.267 1.00 57.20 O
ATOM 11 C2' A B 342 49.425 131.394 18.158 1.00 60.47 C
ATOM 12 O2' A B 342 49.997 131.483 19.449 1.00 60.10 O
ATOM 13 C1' A B 342 48.025 132.015 18.188 1.00 60.86 C
ATOM 14 N9 A B 342 47.089 131.395 17.248 1.00 61.41 N
ATOM 15 C8 A B 342 46.741 131.823 15.990 1.00 61.35 C
ATOM 16 N7 A B 342 45.867 131.051 15.392 1.00 61.44 N
ATOM 17 C5 A B 342 45.623 130.045 16.314 1.00 61.40 C
ATOM 18 C6 A B 342 44.791 128.914 16.283 1.00 61.37 C
ATOM 19 N6 A B 342 44.020 128.586 15.244 1.00 59.41 N
ATOM 20 N1 A B 342 44.781 128.114 17.372 1.00 62.34 N
ATOM 21 C2 A B 342 45.559 128.434 18.411 1.00 61.46 C
ATOM 22 N3 A B 342 46.384 129.464 18.559 1.00 61.52 N
ATOM 23 C4 A B 342 46.370 130.243 17.462 1.00 61.95 C
ATOM 24 P C B 343 52.391 131.265 16.389 1.00 57.05 P
ATOM 25 OP1 C B 343 53.819 131.540 16.673 1.00 58.38 O
ATOM 26 OP2 C B 343 51.897 131.300 14.985 1.00 58.37 O
ATOM 27 O5' C B 343 52.041 129.839 17.001 1.00 58.70 O
TER
ATOM 2 P C A 343 52.391 131.265 16.389 1.00 57.05 P
ATOM 3 OP1 C A 343 53.819 131.540 16.673 1.00 58.38 O
ATOM 4 OP2 C A 343 51.897 131.300 14.985 1.00 58.37 O
ATOM 5 O5' C A 343 52.041 129.839 17.001 1.00 58.70 O
ATOM 6 C5' C A 343 52.529 129.454 18.297 1.00 58.54 C
ATOM 7 C4' C A 343 51.946 128.124 18.699 1.00 58.69 C
ATOM 8 O4' C A 343 50.500 128.230 18.759 1.00 60.70 O
ATOM 9 C3' C A 343 52.193 126.976 17.737 1.00 58.66 C
ATOM 10 O3' C A 343 53.466 126.381 17.954 1.00 58.16 O
ATOM 11 C2' C A 343 51.062 126.023 18.087 1.00 59.88 C
ATOM 12 O2' C A 343 51.330 125.314 19.275 1.00 60.12 O
ATOM 13 C1' C A 343 49.916 127.003 18.349 1.00 61.74 C
ATOM 14 N1 C A 343 49.073 127.249 17.160 1.00 64.69 N
ATOM 15 C2 C A 343 48.111 126.287 16.799 1.00 65.47 C
ATOM 16 O2 C A 343 47.991 125.259 17.490 1.00 65.90 O
ATOM 17 N3 C A 343 47.343 126.501 15.708 1.00 65.93 N
ATOM 18 C4 C A 343 47.502 127.613 14.986 1.00 67.06 C
ATOM 19 N4 C A 343 46.724 127.778 13.914 1.00 68.21 N
ATOM 20 C5 C A 343 48.467 128.607 15.330 1.00 66.28 C
ATOM 21 C6 C A 343 49.221 128.388 16.413 1.00 65.01 C
ATOM 22 P C A 344 54.229 125.670 16.737 1.00 57.45 P
ATOM 23 OP1 C A 344 55.505 125.086 17.238 1.00 58.83 O
ATOM 24 OP2 C A 344 54.261 126.640 15.624 1.00 59.91 O
ATOM 25 O5' C A 344 53.265 124.476 16.320 1.00 58.33 O
TER
ATOM 1 O3' G B 341 47.768 136.093 14.305 1.00 65.29 O
ATOM 2 P A B 342 48.804 134.949 13.867 1.00 65.35 P
ATOM 3 OP1 A B 342 50.102 135.621 13.579 1.00 65.11 O
ATOM 4 OP2 A B 342 48.172 134.083 12.834 1.00 64.48 O
ATOM 5 O5' A B 342 48.988 134.082 15.186 1.00 64.72 O
ATOM 6 C5' A B 342 49.585 134.653 16.363 1.00 62.72 C
ATOM 7 C4' A B 342 49.546 133.658 17.491 1.00 61.06 C
ATOM 8 O4' A B 342 48.165 133.383 17.840 1.00 60.45 O
ATOM 9 C3' A B 342 50.119 132.296 17.148 1.00 59.73 C
ATOM 10 O3' A B 342 51.529 132.288 17.267 1.00 57.20 O
ATOM 11 C2' A B 342 49.425 131.394 18.158 1.00 60.47 C
ATOM 12 O2' A B 342 49.997 131.483 19.449 1.00 60.10 O
ATOM 13 C1' A B 342 48.025 132.015 18.188 1.00 60.86 C
ATOM 14 N9 A B 342 47.089 131.395 17.248 1.00 61.41 N
ATOM 15 C8 A B 342 46.741 131.823 15.990 1.00 61.35 C
ATOM 16 N7 A B 342 45.867 131.051 15.392 1.00 61.44 N
ATOM 17 C5 A B 342 45.623 130.045 16.314 1.00 61.40 C
ATOM 18 C6 A B 342 44.791 128.914 16.283 1.00 61.37 C
ATOM 19 N6 A B 342 44.020 128.586 15.244 1.00 59.41 N
ATOM 20 N1 A B 342 44.781 128.114 17.372 1.00 62.34 N
ATOM 21 C2 A B 342 45.559 128.434 18.411 1.00 61.46 C
ATOM 22 N3 A B 342 46.384 129.464 18.559 1.00 61.52 N
ATOM 23 C4 A B 342 46.370 130.243 17.462 1.00 61.95 C
ATOM 24 P C B 343 52.391 131.265 16.389 1.00 57.05 P
ATOM 25 OP1 C B 343 53.819 131.540 16.673 1.00 58.38 O
ATOM 26 OP2 C B 343 51.897 131.300 14.985 1.00 58.37 O
ATOM 27 O5' C B 343 52.041 129.839 17.001 1.00 58.70 O
TER
Atoms:
C2: (48.111,126.287,16.799)
OP1: (53.819,131.540,16.673)
OP2: (51.897,131.300,14.985)
C4: (47.502,127.613,14.986)
O5': (52.041,129.839,17.001)
C3': (52.193,126.976,17.737)
C1': (49.916,127.003,18.349)
O4': (50.500,128.230,18.759)
C5': (52.529,129.454,18.297)
P: (52.391,131.265,16.389)
O2: (47.991,125.259,17.490)
C4': (51.946,128.124,18.699)
C2': (51.062,126.023,18.087)
O2': (51.330,125.314,19.275)
N1: (49.073,127.249,17.160)
N3: (47.343,126.501,15.708)
N4: (46.724,127.778,13.914)
C6: (49.221,128.388,16.413)
C5: (48.467,128.607,15.330)
O3': (53.466,126.381,17.954)
OP1: (53.819,131.540,16.673)
OP2: (51.897,131.300,14.985)
C4: (47.502,127.613,14.986)
O5': (52.041,129.839,17.001)
C3': (52.193,126.976,17.737)
C1': (49.916,127.003,18.349)
O4': (50.500,128.230,18.759)
C5': (52.529,129.454,18.297)
P: (52.391,131.265,16.389)
O2: (47.991,125.259,17.490)
C4': (51.946,128.124,18.699)
C2': (51.062,126.023,18.087)
O2': (51.330,125.314,19.275)
N1: (49.073,127.249,17.160)
N3: (47.343,126.501,15.708)
N4: (46.724,127.778,13.914)
C6: (49.221,128.388,16.413)
C5: (48.467,128.607,15.330)
O3': (53.466,126.381,17.954)
OP1: (50.102,135.621,13.579)
OP2: (48.172,134.083,12.834)
C3': (50.119,132.296,17.148)
C1': (48.025,132.015,18.188)
C5': (49.585,134.653,16.363)
O4': (48.165,133.383,17.840)
C8: (46.741,131.823,15.990)
O2': (49.997,131.483,19.449)
C6: (44.791,128.914,16.283)
C5: (45.623,130.045,16.314)
C4: (46.370,130.243,17.462)
P: (48.804,134.949,13.867)
C4': (49.546,133.658,17.491)
C2': (49.425,131.394,18.158)
C2: (45.559,128.434,18.411)
N1: (44.781,128.114,17.372)
N3: (46.384,129.464,18.559)
N6: (44.020,128.586,15.244)
N7: (45.867,131.051,15.392)
N9: (47.089,131.395,17.248)
O5': (48.988,134.082,15.186)
O3': (51.529,132.288,17.267)
OP2: (48.172,134.083,12.834)
C3': (50.119,132.296,17.148)
C1': (48.025,132.015,18.188)
C5': (49.585,134.653,16.363)
O4': (48.165,133.383,17.840)
C8: (46.741,131.823,15.990)
O2': (49.997,131.483,19.449)
C6: (44.791,128.914,16.283)
C5: (45.623,130.045,16.314)
C4: (46.370,130.243,17.462)
P: (48.804,134.949,13.867)
C4': (49.546,133.658,17.491)
C2': (49.425,131.394,18.158)
C2: (45.559,128.434,18.411)
N1: (44.781,128.114,17.372)
N3: (46.384,129.464,18.559)
N6: (44.020,128.586,15.244)
N7: (45.867,131.051,15.392)
N9: (47.089,131.395,17.248)
O5': (48.988,134.082,15.186)
O3': (51.529,132.288,17.267)
Image (generated by PyMOL):