Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0551:0550
Extra
PDB:
ATOM 1 O3' A A 550 -15.820 98.479 96.155 1.00 51.38 O
ATOM 2 P C A 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 3 OP1 C A 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 4 OP2 C A 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 5 O5' C A 551 -13.606 97.298 96.090 1.00 52.23 O
ATOM 6 C5' C A 551 -13.602 96.956 94.691 1.00 51.50 C
ATOM 7 C4' C A 551 -12.237 97.186 94.097 1.00 50.68 C
ATOM 8 O4' C A 551 -11.899 98.598 94.168 1.00 51.81 O
ATOM 9 C3' C A 551 -11.091 96.506 94.819 1.00 50.48 C
ATOM 10 O3' C A 551 -10.985 95.151 94.434 1.00 49.39 O
ATOM 11 C2' C A 551 -9.895 97.330 94.366 1.00 51.48 C
ATOM 12 O2' C A 551 -9.444 96.968 93.073 1.00 50.94 O
ATOM 13 C1' C A 551 -10.499 98.739 94.333 1.00 50.93 C
ATOM 14 N1 C A 551 -10.241 99.526 95.553 1.00 53.15 N
ATOM 15 C2 C A 551 -9.100 100.340 95.594 1.00 53.65 C
ATOM 16 O2 C A 551 -8.350 100.375 94.602 1.00 54.38 O
ATOM 17 N3 C A 551 -8.842 101.062 96.707 1.00 52.86 N
ATOM 18 C4 C A 551 -9.666 100.991 97.756 1.00 53.55 C
ATOM 19 N4 C A 551 -9.358 101.710 98.839 1.00 52.50 N
ATOM 20 C5 C A 551 -10.838 100.179 97.742 1.00 52.19 C
ATOM 21 C6 C A 551 -11.085 99.470 96.629 1.00 52.25 C
ATOM 22 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 23 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 24 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 25 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
TER
ATOM 1 O3' G B 549 -17.703 102.755 100.139 1.00 55.96 O
ATOM 2 P A B 550 -16.764 101.455 100.068 1.00 55.35 P
ATOM 3 OP1 A B 550 -17.585 100.256 100.366 1.00 56.95 O
ATOM 4 OP2 A B 550 -15.564 101.735 100.884 1.00 55.19 O
ATOM 5 O5' A B 550 -16.328 101.375 98.536 1.00 55.24 O
ATOM 6 C5' A B 550 -17.270 101.011 97.506 1.00 53.63 C
ATOM 7 C4' A B 550 -16.556 100.791 96.186 1.00 53.53 C
ATOM 8 O4' A B 550 -15.956 102.032 95.725 1.00 53.21 O
ATOM 9 C3' A B 550 -15.390 99.821 96.222 1.00 51.74 C
ATOM 10 O3' A B 550 -15.820 98.479 96.155 1.00 51.38 O
ATOM 11 C2' A B 550 -14.588 100.231 94.996 1.00 51.71 C
ATOM 12 O2' A B 550 -15.139 99.735 93.792 1.00 50.24 O
ATOM 13 C1' A B 550 -14.741 101.752 95.043 1.00 51.39 C
ATOM 14 N9 A B 550 -13.649 102.419 95.755 1.00 52.19 N
ATOM 15 C8 A B 550 -13.643 102.868 97.052 1.00 52.38 C
ATOM 16 N7 A B 550 -12.519 103.439 97.410 1.00 51.09 N
ATOM 17 C5 A B 550 -11.727 103.356 96.274 1.00 52.16 C
ATOM 18 C6 A B 550 -10.418 103.777 96.007 1.00 50.92 C
ATOM 19 N6 A B 550 -9.641 104.377 96.904 1.00 49.66 N
ATOM 20 N1 A B 550 -9.926 103.551 94.773 1.00 51.78 N
ATOM 21 C2 A B 550 -10.699 102.933 93.877 1.00 51.65 C
ATOM 22 N3 A B 550 -11.940 102.481 94.009 1.00 53.62 N
ATOM 23 C4 A B 550 -12.407 102.729 95.247 1.00 52.76 C
ATOM 24 P C B 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 25 OP1 C B 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 26 OP2 C B 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 27 O5' C B 551 -13.606 97.298 96.090 1.00 52.23 O
TER
ATOM 2 P C A 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 3 OP1 C A 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 4 OP2 C A 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 5 O5' C A 551 -13.606 97.298 96.090 1.00 52.23 O
ATOM 6 C5' C A 551 -13.602 96.956 94.691 1.00 51.50 C
ATOM 7 C4' C A 551 -12.237 97.186 94.097 1.00 50.68 C
ATOM 8 O4' C A 551 -11.899 98.598 94.168 1.00 51.81 O
ATOM 9 C3' C A 551 -11.091 96.506 94.819 1.00 50.48 C
ATOM 10 O3' C A 551 -10.985 95.151 94.434 1.00 49.39 O
ATOM 11 C2' C A 551 -9.895 97.330 94.366 1.00 51.48 C
ATOM 12 O2' C A 551 -9.444 96.968 93.073 1.00 50.94 O
ATOM 13 C1' C A 551 -10.499 98.739 94.333 1.00 50.93 C
ATOM 14 N1 C A 551 -10.241 99.526 95.553 1.00 53.15 N
ATOM 15 C2 C A 551 -9.100 100.340 95.594 1.00 53.65 C
ATOM 16 O2 C A 551 -8.350 100.375 94.602 1.00 54.38 O
ATOM 17 N3 C A 551 -8.842 101.062 96.707 1.00 52.86 N
ATOM 18 C4 C A 551 -9.666 100.991 97.756 1.00 53.55 C
ATOM 19 N4 C A 551 -9.358 101.710 98.839 1.00 52.50 N
ATOM 20 C5 C A 551 -10.838 100.179 97.742 1.00 52.19 C
ATOM 21 C6 C A 551 -11.085 99.470 96.629 1.00 52.25 C
ATOM 22 P G A 552 -10.733 94.034 95.551 1.00 52.63 P
ATOM 23 OP1 G A 552 -10.548 92.731 94.861 1.00 49.15 O
ATOM 24 OP2 G A 552 -11.792 94.181 96.583 1.00 52.59 O
ATOM 25 O5' G A 552 -9.357 94.466 96.230 1.00 52.94 O
TER
ATOM 1 O3' G B 549 -17.703 102.755 100.139 1.00 55.96 O
ATOM 2 P A B 550 -16.764 101.455 100.068 1.00 55.35 P
ATOM 3 OP1 A B 550 -17.585 100.256 100.366 1.00 56.95 O
ATOM 4 OP2 A B 550 -15.564 101.735 100.884 1.00 55.19 O
ATOM 5 O5' A B 550 -16.328 101.375 98.536 1.00 55.24 O
ATOM 6 C5' A B 550 -17.270 101.011 97.506 1.00 53.63 C
ATOM 7 C4' A B 550 -16.556 100.791 96.186 1.00 53.53 C
ATOM 8 O4' A B 550 -15.956 102.032 95.725 1.00 53.21 O
ATOM 9 C3' A B 550 -15.390 99.821 96.222 1.00 51.74 C
ATOM 10 O3' A B 550 -15.820 98.479 96.155 1.00 51.38 O
ATOM 11 C2' A B 550 -14.588 100.231 94.996 1.00 51.71 C
ATOM 12 O2' A B 550 -15.139 99.735 93.792 1.00 50.24 O
ATOM 13 C1' A B 550 -14.741 101.752 95.043 1.00 51.39 C
ATOM 14 N9 A B 550 -13.649 102.419 95.755 1.00 52.19 N
ATOM 15 C8 A B 550 -13.643 102.868 97.052 1.00 52.38 C
ATOM 16 N7 A B 550 -12.519 103.439 97.410 1.00 51.09 N
ATOM 17 C5 A B 550 -11.727 103.356 96.274 1.00 52.16 C
ATOM 18 C6 A B 550 -10.418 103.777 96.007 1.00 50.92 C
ATOM 19 N6 A B 550 -9.641 104.377 96.904 1.00 49.66 N
ATOM 20 N1 A B 550 -9.926 103.551 94.773 1.00 51.78 N
ATOM 21 C2 A B 550 -10.699 102.933 93.877 1.00 51.65 C
ATOM 22 N3 A B 550 -11.940 102.481 94.009 1.00 53.62 N
ATOM 23 C4 A B 550 -12.407 102.729 95.247 1.00 52.76 C
ATOM 24 P C B 551 -14.973 97.343 96.903 1.00 51.99 P
ATOM 25 OP1 C B 551 -15.665 96.040 96.682 1.00 53.02 O
ATOM 26 OP2 C B 551 -14.702 97.812 98.287 1.00 51.27 O
ATOM 27 O5' C B 551 -13.606 97.298 96.090 1.00 52.23 O
TER
Atoms:
C2: (-9.100,100.340,95.594)
OP1: (-15.665,96.040,96.682)
OP2: (-14.702,97.812,98.287)
C4: (-9.666,100.991,97.756)
O5': (-13.606,97.298,96.090)
C3': (-11.091,96.506,94.819)
C1': (-10.499,98.739,94.333)
O4': (-11.899,98.598,94.168)
C5': (-13.602,96.956,94.691)
P: (-14.973,97.343,96.903)
O2: (-8.350,100.375,94.602)
C4': (-12.237,97.186,94.097)
C2': (-9.895,97.330,94.366)
O2': (-9.444,96.968,93.073)
N1: (-10.241,99.526,95.553)
N3: (-8.842,101.062,96.707)
N4: (-9.358,101.710,98.839)
C6: (-11.085,99.470,96.629)
C5: (-10.838,100.179,97.742)
O3': (-10.985,95.151,94.434)
OP1: (-15.665,96.040,96.682)
OP2: (-14.702,97.812,98.287)
C4: (-9.666,100.991,97.756)
O5': (-13.606,97.298,96.090)
C3': (-11.091,96.506,94.819)
C1': (-10.499,98.739,94.333)
O4': (-11.899,98.598,94.168)
C5': (-13.602,96.956,94.691)
P: (-14.973,97.343,96.903)
O2: (-8.350,100.375,94.602)
C4': (-12.237,97.186,94.097)
C2': (-9.895,97.330,94.366)
O2': (-9.444,96.968,93.073)
N1: (-10.241,99.526,95.553)
N3: (-8.842,101.062,96.707)
N4: (-9.358,101.710,98.839)
C6: (-11.085,99.470,96.629)
C5: (-10.838,100.179,97.742)
O3': (-10.985,95.151,94.434)
OP1: (-17.585,100.256,100.366)
OP2: (-15.564,101.735,100.884)
C3': (-15.390,99.821,96.222)
C1': (-14.741,101.752,95.043)
C5': (-17.270,101.011,97.506)
O4': (-15.956,102.032,95.725)
C8: (-13.643,102.868,97.052)
O2': (-15.139,99.735,93.792)
C6: (-10.418,103.777,96.007)
C5: (-11.727,103.356,96.274)
C4: (-12.407,102.729,95.247)
P: (-16.764,101.455,100.068)
C4': (-16.556,100.791,96.186)
C2': (-14.588,100.231,94.996)
C2: (-10.699,102.933,93.877)
N1: (-9.926,103.551,94.773)
N3: (-11.940,102.481,94.009)
N6: (-9.641,104.377,96.904)
N7: (-12.519,103.439,97.410)
N9: (-13.649,102.419,95.755)
O5': (-16.328,101.375,98.536)
O3': (-15.820,98.479,96.155)
OP2: (-15.564,101.735,100.884)
C3': (-15.390,99.821,96.222)
C1': (-14.741,101.752,95.043)
C5': (-17.270,101.011,97.506)
O4': (-15.956,102.032,95.725)
C8: (-13.643,102.868,97.052)
O2': (-15.139,99.735,93.792)
C6: (-10.418,103.777,96.007)
C5: (-11.727,103.356,96.274)
C4: (-12.407,102.729,95.247)
P: (-16.764,101.455,100.068)
C4': (-16.556,100.791,96.186)
C2': (-14.588,100.231,94.996)
C2: (-10.699,102.933,93.877)
N1: (-9.926,103.551,94.773)
N3: (-11.940,102.481,94.009)
N6: (-9.641,104.377,96.904)
N7: (-12.519,103.439,97.410)
N9: (-13.649,102.419,95.755)
O5': (-16.328,101.375,98.536)
O3': (-15.820,98.479,96.155)
Image (generated by PyMOL):