Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1838:11604
Extra
PDB:
ATOM 1 O3' C A 837 4.948 28.916 103.874 1.00 48.42 O
ATOM 2 P G A 838 3.480 29.382 104.293 1.00 50.83 P
ATOM 3 OP1 G A 838 2.535 28.939 103.245 1.00 50.63 O
ATOM 4 OP2 G A 838 3.572 30.831 104.644 1.00 51.29 O
ATOM 5 O5' G A 838 3.259 28.526 105.582 1.00 50.94 O
ATOM 6 C5' G A 838 3.522 27.136 105.544 1.00 50.53 C
ATOM 7 C4' G A 838 3.342 26.503 106.885 1.00 50.72 C
ATOM 8 O4' G A 838 4.485 26.831 107.708 1.00 50.83 O
ATOM 9 C3' G A 838 2.131 26.991 107.650 1.00 51.23 C
ATOM 10 O3' G A 838 1.739 25.983 108.572 1.00 51.28 O
ATOM 11 C2' G A 838 2.709 28.162 108.409 1.00 51.63 C
ATOM 12 O2' G A 838 1.979 28.552 109.534 1.00 52.14 O
ATOM 13 C1' G A 838 4.070 27.619 108.796 1.00 51.37 C
ATOM 14 N9 G A 838 5.048 28.675 109.027 1.00 51.55 N
ATOM 15 C8 G A 838 5.409 29.649 108.145 1.00 51.53 C
ATOM 16 N7 G A 838 6.230 30.530 108.655 1.00 51.78 N
ATOM 17 C5 G A 838 6.386 30.122 109.948 1.00 51.98 C
ATOM 18 C6 G A 838 7.157 30.693 110.949 1.00 52.30 C
ATOM 19 O6 G A 838 7.877 31.682 110.844 1.00 52.44 O
ATOM 20 N1 G A 838 7.046 30.004 112.145 1.00 52.46 N
ATOM 21 C2 G A 838 6.295 28.874 112.310 1.00 52.31 C
ATOM 22 N2 G A 838 6.330 28.312 113.522 1.00 52.50 N
ATOM 23 N3 G A 838 5.563 28.320 111.363 1.00 52.01 N
ATOM 24 C4 G A 838 5.657 28.998 110.208 1.00 51.86 C
ATOM 25 P A A 839 0.293 25.302 108.485 1.00 62.86 P
ATOM 26 OP1 A A 839 -0.486 26.005 107.398 1.00 62.90 O
ATOM 27 OP2 A A 839 -0.242 25.278 109.889 1.00 63.30 O
ATOM 28 O5' A A 839 0.608 23.842 108.007 1.00 62.33 O
TER
ATOM 1 O3' U B1603 5.110 27.790 117.039 1.00 55.56 O
ATOM 2 P C B1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 3 OP1 C B1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 4 OP2 C B1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 5 O5' C B1604 3.798 29.872 116.734 1.00 50.23 O
ATOM 6 C5' C B1604 3.423 29.786 115.379 1.00 49.85 C
ATOM 7 C4' C B1604 1.939 29.950 115.234 1.00 50.09 C
ATOM 8 O4' C B1604 1.284 28.984 116.083 1.00 50.19 O
ATOM 9 C3' C B1604 1.367 31.288 115.678 1.00 50.69 C
ATOM 10 O3' C B1604 1.427 32.278 114.666 1.00 50.66 O
ATOM 11 C2' C B1604 -0.053 30.928 116.069 1.00 50.94 C
ATOM 12 O2' C B1604 -0.878 30.843 114.926 1.00 50.72 O
ATOM 13 C1' C B1604 0.120 29.528 116.640 1.00 50.70 C
ATOM 14 N1 C B1604 0.265 29.562 118.096 1.00 51.14 N
ATOM 15 C2 C B1604 -0.891 29.631 118.827 1.00 51.58 C
ATOM 16 O2 C B1604 -1.943 29.625 118.172 1.00 51.56 O
ATOM 17 N3 C B1604 -0.831 29.706 120.171 1.00 52.03 N
ATOM 18 C4 C B1604 0.349 29.730 120.771 1.00 52.03 C
ATOM 19 N4 C B1604 0.446 29.808 122.101 1.00 52.48 N
ATOM 20 C5 C B1604 1.537 29.666 120.016 1.00 51.57 C
ATOM 21 C6 C B1604 1.463 29.594 118.695 1.00 51.14 C
ATOM 22 P G B1605 1.509 33.850 115.046 1.00 61.38 P
ATOM 23 OP1 G B1605 1.854 34.574 113.798 1.00 61.17 O
ATOM 24 OP2 G B1605 2.398 33.989 116.205 1.00 61.62 O
ATOM 25 O5' G B1605 0.029 34.189 115.473 1.00 61.86 O
TER
ATOM 2 P G A 838 3.480 29.382 104.293 1.00 50.83 P
ATOM 3 OP1 G A 838 2.535 28.939 103.245 1.00 50.63 O
ATOM 4 OP2 G A 838 3.572 30.831 104.644 1.00 51.29 O
ATOM 5 O5' G A 838 3.259 28.526 105.582 1.00 50.94 O
ATOM 6 C5' G A 838 3.522 27.136 105.544 1.00 50.53 C
ATOM 7 C4' G A 838 3.342 26.503 106.885 1.00 50.72 C
ATOM 8 O4' G A 838 4.485 26.831 107.708 1.00 50.83 O
ATOM 9 C3' G A 838 2.131 26.991 107.650 1.00 51.23 C
ATOM 10 O3' G A 838 1.739 25.983 108.572 1.00 51.28 O
ATOM 11 C2' G A 838 2.709 28.162 108.409 1.00 51.63 C
ATOM 12 O2' G A 838 1.979 28.552 109.534 1.00 52.14 O
ATOM 13 C1' G A 838 4.070 27.619 108.796 1.00 51.37 C
ATOM 14 N9 G A 838 5.048 28.675 109.027 1.00 51.55 N
ATOM 15 C8 G A 838 5.409 29.649 108.145 1.00 51.53 C
ATOM 16 N7 G A 838 6.230 30.530 108.655 1.00 51.78 N
ATOM 17 C5 G A 838 6.386 30.122 109.948 1.00 51.98 C
ATOM 18 C6 G A 838 7.157 30.693 110.949 1.00 52.30 C
ATOM 19 O6 G A 838 7.877 31.682 110.844 1.00 52.44 O
ATOM 20 N1 G A 838 7.046 30.004 112.145 1.00 52.46 N
ATOM 21 C2 G A 838 6.295 28.874 112.310 1.00 52.31 C
ATOM 22 N2 G A 838 6.330 28.312 113.522 1.00 52.50 N
ATOM 23 N3 G A 838 5.563 28.320 111.363 1.00 52.01 N
ATOM 24 C4 G A 838 5.657 28.998 110.208 1.00 51.86 C
ATOM 25 P A A 839 0.293 25.302 108.485 1.00 62.86 P
ATOM 26 OP1 A A 839 -0.486 26.005 107.398 1.00 62.90 O
ATOM 27 OP2 A A 839 -0.242 25.278 109.889 1.00 63.30 O
ATOM 28 O5' A A 839 0.608 23.842 108.007 1.00 62.33 O
TER
ATOM 1 O3' U B1603 5.110 27.790 117.039 1.00 55.56 O
ATOM 2 P C B1604 5.205 29.361 117.254 1.00 50.04 P
ATOM 3 OP1 C B1604 6.292 29.847 116.376 1.00 49.74 O
ATOM 4 OP2 C B1604 5.294 29.600 118.713 1.00 50.56 O
ATOM 5 O5' C B1604 3.798 29.872 116.734 1.00 50.23 O
ATOM 6 C5' C B1604 3.423 29.786 115.379 1.00 49.85 C
ATOM 7 C4' C B1604 1.939 29.950 115.234 1.00 50.09 C
ATOM 8 O4' C B1604 1.284 28.984 116.083 1.00 50.19 O
ATOM 9 C3' C B1604 1.367 31.288 115.678 1.00 50.69 C
ATOM 10 O3' C B1604 1.427 32.278 114.666 1.00 50.66 O
ATOM 11 C2' C B1604 -0.053 30.928 116.069 1.00 50.94 C
ATOM 12 O2' C B1604 -0.878 30.843 114.926 1.00 50.72 O
ATOM 13 C1' C B1604 0.120 29.528 116.640 1.00 50.70 C
ATOM 14 N1 C B1604 0.265 29.562 118.096 1.00 51.14 N
ATOM 15 C2 C B1604 -0.891 29.631 118.827 1.00 51.58 C
ATOM 16 O2 C B1604 -1.943 29.625 118.172 1.00 51.56 O
ATOM 17 N3 C B1604 -0.831 29.706 120.171 1.00 52.03 N
ATOM 18 C4 C B1604 0.349 29.730 120.771 1.00 52.03 C
ATOM 19 N4 C B1604 0.446 29.808 122.101 1.00 52.48 N
ATOM 20 C5 C B1604 1.537 29.666 120.016 1.00 51.57 C
ATOM 21 C6 C B1604 1.463 29.594 118.695 1.00 51.14 C
ATOM 22 P G B1605 1.509 33.850 115.046 1.00 61.38 P
ATOM 23 OP1 G B1605 1.854 34.574 113.798 1.00 61.17 O
ATOM 24 OP2 G B1605 2.398 33.989 116.205 1.00 61.62 O
ATOM 25 O5' G B1605 0.029 34.189 115.473 1.00 61.86 O
TER
Atoms:
OP1: (2.535,28.939,103.245)
OP2: (3.572,30.831,104.644)
C3': (2.131,26.991,107.650)
C1': (4.070,27.619,108.796)
C5': (3.522,27.136,105.544)
O6: (7.877,31.682,110.844)
O4': (4.485,26.831,107.708)
C8: (5.409,29.649,108.145)
C2: (6.295,28.874,112.310)
C6: (7.157,30.693,110.949)
C5: (6.386,30.122,109.948)
C4: (5.657,28.998,110.208)
P: (3.480,29.382,104.293)
C4': (3.342,26.503,106.885)
C2': (2.709,28.162,108.409)
O2': (1.979,28.552,109.534)
N1: (7.046,30.004,112.145)
N2: (6.330,28.312,113.522)
N3: (5.563,28.320,111.363)
N7: (6.230,30.530,108.655)
N9: (5.048,28.675,109.027)
O5': (3.259,28.526,105.582)
O3': (1.739,25.983,108.572)
OP2: (3.572,30.831,104.644)
C3': (2.131,26.991,107.650)
C1': (4.070,27.619,108.796)
C5': (3.522,27.136,105.544)
O6: (7.877,31.682,110.844)
O4': (4.485,26.831,107.708)
C8: (5.409,29.649,108.145)
C2: (6.295,28.874,112.310)
C6: (7.157,30.693,110.949)
C5: (6.386,30.122,109.948)
C4: (5.657,28.998,110.208)
P: (3.480,29.382,104.293)
C4': (3.342,26.503,106.885)
C2': (2.709,28.162,108.409)
O2': (1.979,28.552,109.534)
N1: (7.046,30.004,112.145)
N2: (6.330,28.312,113.522)
N3: (5.563,28.320,111.363)
N7: (6.230,30.530,108.655)
N9: (5.048,28.675,109.027)
O5': (3.259,28.526,105.582)
O3': (1.739,25.983,108.572)
C2: (-0.891,29.631,118.827)
OP1: (6.292,29.847,116.376)
OP2: (5.294,29.600,118.713)
C4: (0.349,29.730,120.771)
O5': (3.798,29.872,116.734)
C3': (1.367,31.288,115.678)
C1': (0.120,29.528,116.640)
O4': (1.284,28.984,116.083)
C5': (3.423,29.786,115.379)
P: (5.205,29.361,117.254)
O2: (-1.943,29.625,118.172)
C4': (1.939,29.950,115.234)
C2': (-0.053,30.928,116.069)
O2': (-0.878,30.843,114.926)
N1: (0.265,29.562,118.096)
N3: (-0.831,29.706,120.171)
N4: (0.446,29.808,122.101)
C6: (1.463,29.594,118.695)
C5: (1.537,29.666,120.016)
O3': (1.427,32.278,114.666)
OP1: (6.292,29.847,116.376)
OP2: (5.294,29.600,118.713)
C4: (0.349,29.730,120.771)
O5': (3.798,29.872,116.734)
C3': (1.367,31.288,115.678)
C1': (0.120,29.528,116.640)
O4': (1.284,28.984,116.083)
C5': (3.423,29.786,115.379)
P: (5.205,29.361,117.254)
O2: (-1.943,29.625,118.172)
C4': (1.939,29.950,115.234)
C2': (-0.053,30.928,116.069)
O2': (-0.878,30.843,114.926)
N1: (0.265,29.562,118.096)
N3: (-0.831,29.706,120.171)
N4: (0.446,29.808,122.101)
C6: (1.463,29.594,118.695)
C5: (1.537,29.666,120.016)
O3': (1.427,32.278,114.666)
Image (generated by PyMOL):