Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1T0D:D10:D9
Extra
PDB:
ATOM 1 O3' A A 9 21.362 -7.922 12.105 1.00 24.26 O
ATOM 2 P C A 10 21.026 -9.358 12.739 1.00 27.90 P
ATOM 3 OP1 C A 10 21.939 -10.352 12.121 1.00 29.42 O
ATOM 4 OP2 C A 10 19.561 -9.576 12.672 1.00 28.84 O
ATOM 5 O5' C A 10 21.403 -9.194 14.280 1.00 27.19 O
ATOM 6 C5' C A 10 22.719 -8.831 14.686 1.00 23.93 C
ATOM 7 C4' C A 10 22.732 -8.464 16.153 1.00 23.61 C
ATOM 8 O4' C A 10 21.963 -7.248 16.351 1.00 24.53 O
ATOM 9 C3' C A 10 22.053 -9.448 17.086 1.00 23.50 C
ATOM 10 O3' C A 10 22.874 -10.552 17.416 1.00 21.82 O
ATOM 11 C2' C A 10 21.757 -8.584 18.302 1.00 23.54 C
ATOM 12 O2' C A 10 22.881 -8.393 19.140 1.00 24.04 O
ATOM 13 C1' C A 10 21.356 -7.266 17.637 1.00 23.07 C
ATOM 14 N1 C A 10 19.893 -7.136 17.481 1.00 21.15 N
ATOM 15 C2 C A 10 19.150 -6.588 18.534 1.00 20.70 C
ATOM 16 O2 C A 10 19.743 -6.208 19.543 1.00 22.46 O
ATOM 17 N3 C A 10 17.801 -6.485 18.420 1.00 20.74 N
ATOM 18 C4 C A 10 17.199 -6.891 17.300 1.00 20.87 C
ATOM 19 N4 C A 10 15.876 -6.756 17.216 1.00 21.09 N
ATOM 20 C5 C A 10 17.933 -7.449 16.211 1.00 21.50 C
ATOM 21 C6 C A 10 19.265 -7.549 16.342 1.00 20.23 C
ATOM 22 P C A 11 22.195 -11.893 17.960 1.00 21.80 P
ATOM 23 OP1 C A 11 23.251 -12.926 18.035 1.00 25.60 O
ATOM 24 OP2 C A 11 20.982 -12.149 17.144 1.00 24.57 O
ATOM 25 O5' C A 11 21.718 -11.522 19.442 1.00 22.12 O
TER
ATOM 1 O3' C B 8 16.878 -5.255 8.730 1.00 21.63 O
ATOM 2 P A B 9 17.047 -6.654 9.497 1.00 26.16 P
ATOM 3 OP1 A B 9 17.483 -7.655 8.496 1.00 23.91 O
ATOM 4 OP2 A B 9 15.819 -6.905 10.309 1.00 24.01 O
ATOM 5 O5' A B 9 18.248 -6.397 10.517 1.00 25.37 O
ATOM 6 C5' A B 9 19.573 -6.157 10.043 1.00 23.39 C
ATOM 7 C4' A B 9 20.492 -5.832 11.197 1.00 24.06 C
ATOM 8 O4' A B 9 20.089 -4.573 11.806 1.00 23.80 O
ATOM 9 C3' A B 9 20.496 -6.820 12.357 1.00 24.08 C
ATOM 10 O3' A B 9 21.362 -7.922 12.105 1.00 24.26 O
ATOM 11 C2' A B 9 21.033 -5.955 13.485 1.00 24.40 C
ATOM 12 O2' A B 9 22.424 -5.760 13.347 1.00 25.68 O
ATOM 13 C1' A B 9 20.317 -4.629 13.209 1.00 24.78 C
ATOM 14 N9 A B 9 19.026 -4.507 13.890 1.00 22.86 N
ATOM 15 C8 A B 9 17.781 -4.770 13.373 1.00 23.30 C
ATOM 16 N7 A B 9 16.798 -4.531 14.210 1.00 23.81 N
ATOM 17 C5 A B 9 17.438 -4.088 15.358 1.00 21.67 C
ATOM 18 C6 A B 9 16.951 -3.656 16.606 1.00 21.61 C
ATOM 19 N6 A B 9 15.649 -3.569 16.911 1.00 19.57 N
ATOM 20 N1 A B 9 17.857 -3.300 17.540 1.00 17.43 N
ATOM 21 C2 A B 9 19.156 -3.364 17.231 1.00 20.19 C
ATOM 22 N3 A B 9 19.737 -3.736 16.091 1.00 22.20 N
ATOM 23 C4 A B 9 18.812 -4.087 15.181 1.00 22.93 C
ATOM 24 P C B 10 21.026 -9.358 12.739 1.00 27.90 P
ATOM 25 OP1 C B 10 21.939 -10.352 12.121 1.00 29.42 O
ATOM 26 OP2 C B 10 19.561 -9.576 12.672 1.00 28.84 O
ATOM 27 O5' C B 10 21.403 -9.194 14.280 1.00 27.19 O
TER
ATOM 2 P C A 10 21.026 -9.358 12.739 1.00 27.90 P
ATOM 3 OP1 C A 10 21.939 -10.352 12.121 1.00 29.42 O
ATOM 4 OP2 C A 10 19.561 -9.576 12.672 1.00 28.84 O
ATOM 5 O5' C A 10 21.403 -9.194 14.280 1.00 27.19 O
ATOM 6 C5' C A 10 22.719 -8.831 14.686 1.00 23.93 C
ATOM 7 C4' C A 10 22.732 -8.464 16.153 1.00 23.61 C
ATOM 8 O4' C A 10 21.963 -7.248 16.351 1.00 24.53 O
ATOM 9 C3' C A 10 22.053 -9.448 17.086 1.00 23.50 C
ATOM 10 O3' C A 10 22.874 -10.552 17.416 1.00 21.82 O
ATOM 11 C2' C A 10 21.757 -8.584 18.302 1.00 23.54 C
ATOM 12 O2' C A 10 22.881 -8.393 19.140 1.00 24.04 O
ATOM 13 C1' C A 10 21.356 -7.266 17.637 1.00 23.07 C
ATOM 14 N1 C A 10 19.893 -7.136 17.481 1.00 21.15 N
ATOM 15 C2 C A 10 19.150 -6.588 18.534 1.00 20.70 C
ATOM 16 O2 C A 10 19.743 -6.208 19.543 1.00 22.46 O
ATOM 17 N3 C A 10 17.801 -6.485 18.420 1.00 20.74 N
ATOM 18 C4 C A 10 17.199 -6.891 17.300 1.00 20.87 C
ATOM 19 N4 C A 10 15.876 -6.756 17.216 1.00 21.09 N
ATOM 20 C5 C A 10 17.933 -7.449 16.211 1.00 21.50 C
ATOM 21 C6 C A 10 19.265 -7.549 16.342 1.00 20.23 C
ATOM 22 P C A 11 22.195 -11.893 17.960 1.00 21.80 P
ATOM 23 OP1 C A 11 23.251 -12.926 18.035 1.00 25.60 O
ATOM 24 OP2 C A 11 20.982 -12.149 17.144 1.00 24.57 O
ATOM 25 O5' C A 11 21.718 -11.522 19.442 1.00 22.12 O
TER
ATOM 1 O3' C B 8 16.878 -5.255 8.730 1.00 21.63 O
ATOM 2 P A B 9 17.047 -6.654 9.497 1.00 26.16 P
ATOM 3 OP1 A B 9 17.483 -7.655 8.496 1.00 23.91 O
ATOM 4 OP2 A B 9 15.819 -6.905 10.309 1.00 24.01 O
ATOM 5 O5' A B 9 18.248 -6.397 10.517 1.00 25.37 O
ATOM 6 C5' A B 9 19.573 -6.157 10.043 1.00 23.39 C
ATOM 7 C4' A B 9 20.492 -5.832 11.197 1.00 24.06 C
ATOM 8 O4' A B 9 20.089 -4.573 11.806 1.00 23.80 O
ATOM 9 C3' A B 9 20.496 -6.820 12.357 1.00 24.08 C
ATOM 10 O3' A B 9 21.362 -7.922 12.105 1.00 24.26 O
ATOM 11 C2' A B 9 21.033 -5.955 13.485 1.00 24.40 C
ATOM 12 O2' A B 9 22.424 -5.760 13.347 1.00 25.68 O
ATOM 13 C1' A B 9 20.317 -4.629 13.209 1.00 24.78 C
ATOM 14 N9 A B 9 19.026 -4.507 13.890 1.00 22.86 N
ATOM 15 C8 A B 9 17.781 -4.770 13.373 1.00 23.30 C
ATOM 16 N7 A B 9 16.798 -4.531 14.210 1.00 23.81 N
ATOM 17 C5 A B 9 17.438 -4.088 15.358 1.00 21.67 C
ATOM 18 C6 A B 9 16.951 -3.656 16.606 1.00 21.61 C
ATOM 19 N6 A B 9 15.649 -3.569 16.911 1.00 19.57 N
ATOM 20 N1 A B 9 17.857 -3.300 17.540 1.00 17.43 N
ATOM 21 C2 A B 9 19.156 -3.364 17.231 1.00 20.19 C
ATOM 22 N3 A B 9 19.737 -3.736 16.091 1.00 22.20 N
ATOM 23 C4 A B 9 18.812 -4.087 15.181 1.00 22.93 C
ATOM 24 P C B 10 21.026 -9.358 12.739 1.00 27.90 P
ATOM 25 OP1 C B 10 21.939 -10.352 12.121 1.00 29.42 O
ATOM 26 OP2 C B 10 19.561 -9.576 12.672 1.00 28.84 O
ATOM 27 O5' C B 10 21.403 -9.194 14.280 1.00 27.19 O
TER
Atoms:
C2: (19.150,-6.588,18.534)
OP1: (21.939,-10.352,12.121)
OP2: (19.561,-9.576,12.672)
C4: (17.199,-6.891,17.300)
O5': (21.403,-9.194,14.280)
C3': (22.053,-9.448,17.086)
C1': (21.356,-7.266,17.637)
O4': (21.963,-7.248,16.351)
C5': (22.719,-8.831,14.686)
P: (21.026,-9.358,12.739)
O2: (19.743,-6.208,19.543)
C4': (22.732,-8.464,16.153)
C2': (21.757,-8.584,18.302)
O2': (22.881,-8.393,19.140)
N1: (19.893,-7.136,17.481)
N3: (17.801,-6.485,18.420)
N4: (15.876,-6.756,17.216)
C6: (19.265,-7.549,16.342)
C5: (17.933,-7.449,16.211)
O3': (22.874,-10.552,17.416)
OP1: (21.939,-10.352,12.121)
OP2: (19.561,-9.576,12.672)
C4: (17.199,-6.891,17.300)
O5': (21.403,-9.194,14.280)
C3': (22.053,-9.448,17.086)
C1': (21.356,-7.266,17.637)
O4': (21.963,-7.248,16.351)
C5': (22.719,-8.831,14.686)
P: (21.026,-9.358,12.739)
O2: (19.743,-6.208,19.543)
C4': (22.732,-8.464,16.153)
C2': (21.757,-8.584,18.302)
O2': (22.881,-8.393,19.140)
N1: (19.893,-7.136,17.481)
N3: (17.801,-6.485,18.420)
N4: (15.876,-6.756,17.216)
C6: (19.265,-7.549,16.342)
C5: (17.933,-7.449,16.211)
O3': (22.874,-10.552,17.416)
OP1: (17.483,-7.655,8.496)
OP2: (15.819,-6.905,10.309)
C3': (20.496,-6.820,12.357)
C1': (20.317,-4.629,13.209)
C5': (19.573,-6.157,10.043)
O4': (20.089,-4.573,11.806)
C8: (17.781,-4.770,13.373)
O2': (22.424,-5.760,13.347)
C6: (16.951,-3.656,16.606)
C5: (17.438,-4.088,15.358)
C4: (18.812,-4.087,15.181)
P: (17.047,-6.654,9.497)
C4': (20.492,-5.832,11.197)
C2': (21.033,-5.955,13.485)
C2: (19.156,-3.364,17.231)
N1: (17.857,-3.300,17.540)
N3: (19.737,-3.736,16.091)
N6: (15.649,-3.569,16.911)
N7: (16.798,-4.531,14.210)
N9: (19.026,-4.507,13.890)
O5': (18.248,-6.397,10.517)
O3': (21.362,-7.922,12.105)
OP2: (15.819,-6.905,10.309)
C3': (20.496,-6.820,12.357)
C1': (20.317,-4.629,13.209)
C5': (19.573,-6.157,10.043)
O4': (20.089,-4.573,11.806)
C8: (17.781,-4.770,13.373)
O2': (22.424,-5.760,13.347)
C6: (16.951,-3.656,16.606)
C5: (17.438,-4.088,15.358)
C4: (18.812,-4.087,15.181)
P: (17.047,-6.654,9.497)
C4': (20.492,-5.832,11.197)
C2': (21.033,-5.955,13.485)
C2: (19.156,-3.364,17.231)
N1: (17.857,-3.300,17.540)
N3: (19.737,-3.736,16.091)
N6: (15.649,-3.569,16.911)
N7: (16.798,-4.531,14.210)
N9: (19.026,-4.507,13.890)
O5': (18.248,-6.397,10.517)
O3': (21.362,-7.922,12.105)
Image (generated by PyMOL):