Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBR:C13:C12
Extra
PDB:
ATOM 1 O3' A A 12 23.168 -9.029 -4.667 1.00 63.67 O
ATOM 2 P C A 13 22.188 -10.046 -3.889 1.00 64.92 P
ATOM 3 OP1 C A 13 22.514 -11.404 -4.390 1.00 64.75 O
ATOM 4 OP2 C A 13 20.787 -9.543 -4.001 1.00 64.27 O
ATOM 5 O5' C A 13 22.640 -9.946 -2.357 1.00 64.69 O
ATOM 6 C5' C A 13 24.020 -9.925 -1.983 1.00 65.89 C
ATOM 7 C4' C A 13 24.198 -9.279 -0.618 1.00 69.26 C
ATOM 8 O4' C A 13 24.075 -7.828 -0.714 1.00 69.90 O
ATOM 9 C3' C A 13 23.210 -9.650 0.481 1.00 69.82 C
ATOM 10 O3' C A 13 23.526 -10.894 1.090 1.00 72.75 O
ATOM 11 C2' C A 13 23.385 -8.488 1.453 1.00 69.16 C
ATOM 12 O2' C A 13 24.552 -8.559 2.251 1.00 66.37 O
ATOM 13 C1' C A 13 23.491 -7.314 0.480 1.00 68.42 C
ATOM 14 N1 C A 13 22.176 -6.721 0.159 1.00 68.54 N
ATOM 15 C2 C A 13 21.505 -5.966 1.145 1.00 67.26 C
ATOM 16 O2 C A 13 22.030 -5.823 2.262 1.00 65.58 O
ATOM 17 N3 C A 13 20.303 -5.418 0.849 1.00 66.43 N
ATOM 18 C4 C A 13 19.766 -5.599 -0.361 1.00 68.54 C
ATOM 19 N4 C A 13 18.578 -5.041 -0.612 1.00 68.68 N
ATOM 20 C5 C A 13 20.421 -6.361 -1.372 1.00 68.64 C
ATOM 21 C6 C A 13 21.609 -6.898 -1.074 1.00 68.06 C
ATOM 22 P G A 14 22.343 -11.847 1.624 1.00 75.46 P
ATOM 23 OP1 G A 14 22.997 -12.908 2.436 1.00 76.94 O
ATOM 24 OP2 G A 14 21.477 -12.231 0.481 1.00 76.34 O
ATOM 25 O5' G A 14 21.480 -10.919 2.593 1.00 75.95 O
TER
ATOM 1 O3' U B 11 20.225 -4.452 -6.597 1.00 68.38 O
ATOM 2 P A B 12 19.507 -5.673 -5.836 1.00 70.30 P
ATOM 3 OP1 A B 12 18.558 -6.296 -6.801 1.00 71.64 O
ATOM 4 OP2 A B 12 19.004 -5.214 -4.513 1.00 71.63 O
ATOM 5 O5' A B 12 20.703 -6.688 -5.574 1.00 66.40 O
ATOM 6 C5' A B 12 21.816 -6.741 -6.453 1.00 59.90 C
ATOM 7 C4' A B 12 23.095 -6.795 -5.666 1.00 60.15 C
ATOM 8 O4' A B 12 23.440 -5.478 -5.169 1.00 58.25 O
ATOM 9 C3' A B 12 23.102 -7.631 -4.395 1.00 60.80 C
ATOM 10 O3' A B 12 23.168 -9.029 -4.667 1.00 63.67 O
ATOM 11 C2' A B 12 24.375 -7.126 -3.727 1.00 59.70 C
ATOM 12 O2' A B 12 25.548 -7.694 -4.287 1.00 55.74 O
ATOM 13 C1' A B 12 24.289 -5.623 -4.031 1.00 58.68 C
ATOM 14 N9 A B 12 23.750 -4.828 -2.918 1.00 56.52 N
ATOM 15 C8 A B 12 22.500 -4.259 -2.787 1.00 55.25 C
ATOM 16 N7 A B 12 22.327 -3.616 -1.655 1.00 55.04 N
ATOM 17 C5 A B 12 23.544 -3.764 -0.996 1.00 53.92 C
ATOM 18 C6 A B 12 24.013 -3.308 0.260 1.00 52.59 C
ATOM 19 N6 A B 12 23.285 -2.581 1.111 1.00 48.72 N
ATOM 20 N1 A B 12 25.274 -3.631 0.611 1.00 52.40 N
ATOM 21 C2 A B 12 26.008 -4.361 -0.238 1.00 53.80 C
ATOM 22 N3 A B 12 25.687 -4.843 -1.436 1.00 53.03 N
ATOM 23 C4 A B 12 24.428 -4.507 -1.761 1.00 54.00 C
ATOM 24 P C B 13 22.188 -10.046 -3.889 1.00 64.92 P
ATOM 25 OP1 C B 13 22.514 -11.404 -4.390 1.00 64.75 O
ATOM 26 OP2 C B 13 20.787 -9.543 -4.001 1.00 64.27 O
ATOM 27 O5' C B 13 22.640 -9.946 -2.357 1.00 64.69 O
TER
ATOM 2 P C A 13 22.188 -10.046 -3.889 1.00 64.92 P
ATOM 3 OP1 C A 13 22.514 -11.404 -4.390 1.00 64.75 O
ATOM 4 OP2 C A 13 20.787 -9.543 -4.001 1.00 64.27 O
ATOM 5 O5' C A 13 22.640 -9.946 -2.357 1.00 64.69 O
ATOM 6 C5' C A 13 24.020 -9.925 -1.983 1.00 65.89 C
ATOM 7 C4' C A 13 24.198 -9.279 -0.618 1.00 69.26 C
ATOM 8 O4' C A 13 24.075 -7.828 -0.714 1.00 69.90 O
ATOM 9 C3' C A 13 23.210 -9.650 0.481 1.00 69.82 C
ATOM 10 O3' C A 13 23.526 -10.894 1.090 1.00 72.75 O
ATOM 11 C2' C A 13 23.385 -8.488 1.453 1.00 69.16 C
ATOM 12 O2' C A 13 24.552 -8.559 2.251 1.00 66.37 O
ATOM 13 C1' C A 13 23.491 -7.314 0.480 1.00 68.42 C
ATOM 14 N1 C A 13 22.176 -6.721 0.159 1.00 68.54 N
ATOM 15 C2 C A 13 21.505 -5.966 1.145 1.00 67.26 C
ATOM 16 O2 C A 13 22.030 -5.823 2.262 1.00 65.58 O
ATOM 17 N3 C A 13 20.303 -5.418 0.849 1.00 66.43 N
ATOM 18 C4 C A 13 19.766 -5.599 -0.361 1.00 68.54 C
ATOM 19 N4 C A 13 18.578 -5.041 -0.612 1.00 68.68 N
ATOM 20 C5 C A 13 20.421 -6.361 -1.372 1.00 68.64 C
ATOM 21 C6 C A 13 21.609 -6.898 -1.074 1.00 68.06 C
ATOM 22 P G A 14 22.343 -11.847 1.624 1.00 75.46 P
ATOM 23 OP1 G A 14 22.997 -12.908 2.436 1.00 76.94 O
ATOM 24 OP2 G A 14 21.477 -12.231 0.481 1.00 76.34 O
ATOM 25 O5' G A 14 21.480 -10.919 2.593 1.00 75.95 O
TER
ATOM 1 O3' U B 11 20.225 -4.452 -6.597 1.00 68.38 O
ATOM 2 P A B 12 19.507 -5.673 -5.836 1.00 70.30 P
ATOM 3 OP1 A B 12 18.558 -6.296 -6.801 1.00 71.64 O
ATOM 4 OP2 A B 12 19.004 -5.214 -4.513 1.00 71.63 O
ATOM 5 O5' A B 12 20.703 -6.688 -5.574 1.00 66.40 O
ATOM 6 C5' A B 12 21.816 -6.741 -6.453 1.00 59.90 C
ATOM 7 C4' A B 12 23.095 -6.795 -5.666 1.00 60.15 C
ATOM 8 O4' A B 12 23.440 -5.478 -5.169 1.00 58.25 O
ATOM 9 C3' A B 12 23.102 -7.631 -4.395 1.00 60.80 C
ATOM 10 O3' A B 12 23.168 -9.029 -4.667 1.00 63.67 O
ATOM 11 C2' A B 12 24.375 -7.126 -3.727 1.00 59.70 C
ATOM 12 O2' A B 12 25.548 -7.694 -4.287 1.00 55.74 O
ATOM 13 C1' A B 12 24.289 -5.623 -4.031 1.00 58.68 C
ATOM 14 N9 A B 12 23.750 -4.828 -2.918 1.00 56.52 N
ATOM 15 C8 A B 12 22.500 -4.259 -2.787 1.00 55.25 C
ATOM 16 N7 A B 12 22.327 -3.616 -1.655 1.00 55.04 N
ATOM 17 C5 A B 12 23.544 -3.764 -0.996 1.00 53.92 C
ATOM 18 C6 A B 12 24.013 -3.308 0.260 1.00 52.59 C
ATOM 19 N6 A B 12 23.285 -2.581 1.111 1.00 48.72 N
ATOM 20 N1 A B 12 25.274 -3.631 0.611 1.00 52.40 N
ATOM 21 C2 A B 12 26.008 -4.361 -0.238 1.00 53.80 C
ATOM 22 N3 A B 12 25.687 -4.843 -1.436 1.00 53.03 N
ATOM 23 C4 A B 12 24.428 -4.507 -1.761 1.00 54.00 C
ATOM 24 P C B 13 22.188 -10.046 -3.889 1.00 64.92 P
ATOM 25 OP1 C B 13 22.514 -11.404 -4.390 1.00 64.75 O
ATOM 26 OP2 C B 13 20.787 -9.543 -4.001 1.00 64.27 O
ATOM 27 O5' C B 13 22.640 -9.946 -2.357 1.00 64.69 O
TER
Atoms:
C2: (21.505,-5.966,1.145)
OP1: (22.514,-11.404,-4.390)
OP2: (20.787,-9.543,-4.001)
C4: (19.766,-5.599,-0.361)
O5': (22.640,-9.946,-2.357)
C3': (23.210,-9.650,0.481)
C1': (23.491,-7.314,0.480)
O4': (24.075,-7.828,-0.714)
C5': (24.020,-9.925,-1.983)
P: (22.188,-10.046,-3.889)
O2: (22.030,-5.823,2.262)
C4': (24.198,-9.279,-0.618)
C2': (23.385,-8.488,1.453)
O2': (24.552,-8.559,2.251)
N1: (22.176,-6.721,0.159)
N3: (20.303,-5.418,0.849)
N4: (18.578,-5.041,-0.612)
C6: (21.609,-6.898,-1.074)
C5: (20.421,-6.361,-1.372)
O3': (23.526,-10.894,1.090)
OP1: (22.514,-11.404,-4.390)
OP2: (20.787,-9.543,-4.001)
C4: (19.766,-5.599,-0.361)
O5': (22.640,-9.946,-2.357)
C3': (23.210,-9.650,0.481)
C1': (23.491,-7.314,0.480)
O4': (24.075,-7.828,-0.714)
C5': (24.020,-9.925,-1.983)
P: (22.188,-10.046,-3.889)
O2: (22.030,-5.823,2.262)
C4': (24.198,-9.279,-0.618)
C2': (23.385,-8.488,1.453)
O2': (24.552,-8.559,2.251)
N1: (22.176,-6.721,0.159)
N3: (20.303,-5.418,0.849)
N4: (18.578,-5.041,-0.612)
C6: (21.609,-6.898,-1.074)
C5: (20.421,-6.361,-1.372)
O3': (23.526,-10.894,1.090)
OP1: (18.558,-6.296,-6.801)
OP2: (19.004,-5.214,-4.513)
C3': (23.102,-7.631,-4.395)
C1': (24.289,-5.623,-4.031)
C5': (21.816,-6.741,-6.453)
O4': (23.440,-5.478,-5.169)
C8: (22.500,-4.259,-2.787)
O2': (25.548,-7.694,-4.287)
C6: (24.013,-3.308,0.260)
C5: (23.544,-3.764,-0.996)
C4: (24.428,-4.507,-1.761)
P: (19.507,-5.673,-5.836)
C4': (23.095,-6.795,-5.666)
C2': (24.375,-7.126,-3.727)
C2: (26.008,-4.361,-0.238)
N1: (25.274,-3.631,0.611)
N3: (25.687,-4.843,-1.436)
N6: (23.285,-2.581,1.111)
N7: (22.327,-3.616,-1.655)
N9: (23.750,-4.828,-2.918)
O5': (20.703,-6.688,-5.574)
O3': (23.168,-9.029,-4.667)
OP2: (19.004,-5.214,-4.513)
C3': (23.102,-7.631,-4.395)
C1': (24.289,-5.623,-4.031)
C5': (21.816,-6.741,-6.453)
O4': (23.440,-5.478,-5.169)
C8: (22.500,-4.259,-2.787)
O2': (25.548,-7.694,-4.287)
C6: (24.013,-3.308,0.260)
C5: (23.544,-3.764,-0.996)
C4: (24.428,-4.507,-1.761)
P: (19.507,-5.673,-5.836)
C4': (23.095,-6.795,-5.666)
C2': (24.375,-7.126,-3.727)
C2: (26.008,-4.361,-0.238)
N1: (25.274,-3.631,0.611)
N3: (25.687,-4.843,-1.436)
N6: (23.285,-2.581,1.111)
N7: (22.327,-3.616,-1.655)
N9: (23.750,-4.828,-2.918)
O5': (20.703,-6.688,-5.574)
O3': (23.168,-9.029,-4.667)
Image (generated by PyMOL):