Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2317:A2318
Extra
PDB:
ATOM 1 O3' G A2316 -139.734 -39.909 23.378 1.00 0.26 O
ATOM 2 P U A2317 -138.234 -39.992 23.909 1.00 1.53 P
ATOM 3 OP1 U A2317 -138.008 -38.799 24.753 1.00 1.53 O
ATOM 4 OP2 U A2317 -137.357 -40.235 22.740 1.00 1.53 O
ATOM 5 O5' U A2317 -138.265 -41.264 24.803 1.00 1.53 O
ATOM 6 C5' U A2317 -138.738 -41.218 26.125 1.00 1.53 C
ATOM 7 C4' U A2317 -138.492 -42.542 26.759 1.00 1.53 C
ATOM 8 O4' U A2317 -138.775 -43.568 25.790 1.00 1.53 O
ATOM 9 C3' U A2317 -137.065 -42.778 27.210 1.00 1.53 C
ATOM 10 O3' U A2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 11 C2' U A2317 -136.764 -44.247 26.861 1.00 1.53 C
ATOM 12 O2' U A2317 -136.851 -45.065 28.036 1.00 1.53 O
ATOM 13 C1' U A2317 -137.907 -44.638 25.919 1.00 1.53 C
ATOM 14 N1 U A2317 -137.498 -45.040 24.580 1.00 1.53 N
ATOM 15 C2 U A2317 -137.469 -46.382 24.318 1.00 1.53 C
ATOM 16 O2 U A2317 -137.615 -47.209 25.179 1.00 1.53 O
ATOM 17 N3 U A2317 -137.184 -46.761 23.044 1.00 1.53 N
ATOM 18 C4 U A2317 -136.970 -45.925 21.991 1.00 1.53 C
ATOM 19 O4 U A2317 -136.715 -46.424 20.892 1.00 1.53 O
ATOM 20 C5 U A2317 -137.091 -44.532 22.314 1.00 1.53 C
ATOM 21 C6 U A2317 -137.384 -44.148 23.562 1.00 1.53 C
ATOM 22 P G A2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 23 OP1 G A2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 24 OP2 G A2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 25 O5' G A2318 -135.844 -40.276 28.809 1.00 0.01 O
TER
ATOM 1 O3' U B2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 2 P G B2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 3 OP1 G B2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 4 OP2 G B2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 5 O5' G B2318 -135.844 -40.276 28.809 1.00 0.01 O
ATOM 6 C5' G B2318 -135.251 -39.749 27.649 1.00 0.01 C
ATOM 7 C4' G B2318 -134.140 -38.814 27.990 1.00 0.01 C
ATOM 8 O4' G B2318 -133.830 -38.892 29.384 1.00 0.01 O
ATOM 9 C3' G B2318 -132.835 -39.112 27.343 1.00 0.01 C
ATOM 10 O3' G B2318 -132.823 -38.718 26.025 1.00 0.01 O
ATOM 11 C2' G B2318 -131.845 -38.376 28.215 1.00 0.01 C
ATOM 12 O2' G B2318 -131.808 -37.006 27.880 1.00 0.01 O
ATOM 13 C1' G B2318 -132.491 -38.517 29.579 1.00 0.01 C
ATOM 14 N9 G B2318 -131.827 -39.505 30.446 1.00 0.01 N
ATOM 15 C8 G B2318 -132.422 -40.410 31.284 1.00 0.01 C
ATOM 16 N7 G B2318 -131.586 -41.100 32.005 1.00 0.01 N
ATOM 17 C5 G B2318 -130.378 -40.578 31.638 1.00 0.01 C
ATOM 18 C6 G B2318 -129.114 -40.928 32.082 1.00 0.01 C
ATOM 19 O6 G B2318 -128.847 -41.796 32.907 1.00 0.01 O
ATOM 20 N1 G B2318 -128.128 -40.190 31.461 1.00 0.01 N
ATOM 21 C2 G B2318 -128.363 -39.251 30.519 1.00 0.01 C
ATOM 22 N2 G B2318 -127.303 -38.642 30.016 1.00 0.01 N
ATOM 23 N3 G B2318 -129.548 -38.909 30.087 1.00 0.01 N
ATOM 24 C4 G B2318 -130.502 -39.608 30.696 1.00 0.01 C
ATOM 25 P C B2319 -133.035 -39.828 24.918 1.00 1.45 P
ATOM 26 OP1 C B2319 -133.786 -39.195 23.762 1.00 1.45 O
ATOM 27 OP2 C B2319 -133.617 -41.030 25.599 1.00 1.45 O
ATOM 28 O5' C B2319 -131.546 -40.111 24.502 1.00 1.45 O
TER
ATOM 2 P U A2317 -138.234 -39.992 23.909 1.00 1.53 P
ATOM 3 OP1 U A2317 -138.008 -38.799 24.753 1.00 1.53 O
ATOM 4 OP2 U A2317 -137.357 -40.235 22.740 1.00 1.53 O
ATOM 5 O5' U A2317 -138.265 -41.264 24.803 1.00 1.53 O
ATOM 6 C5' U A2317 -138.738 -41.218 26.125 1.00 1.53 C
ATOM 7 C4' U A2317 -138.492 -42.542 26.759 1.00 1.53 C
ATOM 8 O4' U A2317 -138.775 -43.568 25.790 1.00 1.53 O
ATOM 9 C3' U A2317 -137.065 -42.778 27.210 1.00 1.53 C
ATOM 10 O3' U A2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 11 C2' U A2317 -136.764 -44.247 26.861 1.00 1.53 C
ATOM 12 O2' U A2317 -136.851 -45.065 28.036 1.00 1.53 O
ATOM 13 C1' U A2317 -137.907 -44.638 25.919 1.00 1.53 C
ATOM 14 N1 U A2317 -137.498 -45.040 24.580 1.00 1.53 N
ATOM 15 C2 U A2317 -137.469 -46.382 24.318 1.00 1.53 C
ATOM 16 O2 U A2317 -137.615 -47.209 25.179 1.00 1.53 O
ATOM 17 N3 U A2317 -137.184 -46.761 23.044 1.00 1.53 N
ATOM 18 C4 U A2317 -136.970 -45.925 21.991 1.00 1.53 C
ATOM 19 O4 U A2317 -136.715 -46.424 20.892 1.00 1.53 O
ATOM 20 C5 U A2317 -137.091 -44.532 22.314 1.00 1.53 C
ATOM 21 C6 U A2317 -137.384 -44.148 23.562 1.00 1.53 C
ATOM 22 P G A2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 23 OP1 G A2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 24 OP2 G A2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 25 O5' G A2318 -135.844 -40.276 28.809 1.00 0.01 O
TER
ATOM 1 O3' U B2317 -136.950 -42.494 28.594 1.00 1.53 O
ATOM 2 P G B2318 -135.648 -41.803 29.193 1.00 0.01 P
ATOM 3 OP1 G B2318 -134.484 -42.390 28.450 1.00 0.01 O
ATOM 4 OP2 G B2318 -135.718 -41.951 30.672 1.00 0.01 O
ATOM 5 O5' G B2318 -135.844 -40.276 28.809 1.00 0.01 O
ATOM 6 C5' G B2318 -135.251 -39.749 27.649 1.00 0.01 C
ATOM 7 C4' G B2318 -134.140 -38.814 27.990 1.00 0.01 C
ATOM 8 O4' G B2318 -133.830 -38.892 29.384 1.00 0.01 O
ATOM 9 C3' G B2318 -132.835 -39.112 27.343 1.00 0.01 C
ATOM 10 O3' G B2318 -132.823 -38.718 26.025 1.00 0.01 O
ATOM 11 C2' G B2318 -131.845 -38.376 28.215 1.00 0.01 C
ATOM 12 O2' G B2318 -131.808 -37.006 27.880 1.00 0.01 O
ATOM 13 C1' G B2318 -132.491 -38.517 29.579 1.00 0.01 C
ATOM 14 N9 G B2318 -131.827 -39.505 30.446 1.00 0.01 N
ATOM 15 C8 G B2318 -132.422 -40.410 31.284 1.00 0.01 C
ATOM 16 N7 G B2318 -131.586 -41.100 32.005 1.00 0.01 N
ATOM 17 C5 G B2318 -130.378 -40.578 31.638 1.00 0.01 C
ATOM 18 C6 G B2318 -129.114 -40.928 32.082 1.00 0.01 C
ATOM 19 O6 G B2318 -128.847 -41.796 32.907 1.00 0.01 O
ATOM 20 N1 G B2318 -128.128 -40.190 31.461 1.00 0.01 N
ATOM 21 C2 G B2318 -128.363 -39.251 30.519 1.00 0.01 C
ATOM 22 N2 G B2318 -127.303 -38.642 30.016 1.00 0.01 N
ATOM 23 N3 G B2318 -129.548 -38.909 30.087 1.00 0.01 N
ATOM 24 C4 G B2318 -130.502 -39.608 30.696 1.00 0.01 C
ATOM 25 P C B2319 -133.035 -39.828 24.918 1.00 1.45 P
ATOM 26 OP1 C B2319 -133.786 -39.195 23.762 1.00 1.45 O
ATOM 27 OP2 C B2319 -133.617 -41.030 25.599 1.00 1.45 O
ATOM 28 O5' C B2319 -131.546 -40.111 24.502 1.00 1.45 O
TER
Atoms:
C4: (-136.970,-45.925,21.991)
N3: (-137.184,-46.761,23.044)
OP1: (-138.008,-38.799,24.753)
OP2: (-137.357,-40.235,22.740)
C2: (-137.469,-46.382,24.318)
C1': (-137.907,-44.638,25.919)
C3': (-137.065,-42.778,27.210)
O5': (-138.265,-41.264,24.803)
O4': (-138.775,-43.568,25.790)
C5': (-138.738,-41.218,26.125)
P: (-138.234,-39.992,23.909)
C4': (-138.492,-42.542,26.759)
C2': (-136.764,-44.247,26.861)
O2': (-136.851,-45.065,28.036)
N1: (-137.498,-45.040,24.580)
O4: (-136.715,-46.424,20.892)
O2: (-137.615,-47.209,25.179)
C6: (-137.384,-44.148,23.562)
C5: (-137.091,-44.532,22.314)
O3': (-136.950,-42.494,28.594)
N3: (-137.184,-46.761,23.044)
OP1: (-138.008,-38.799,24.753)
OP2: (-137.357,-40.235,22.740)
C2: (-137.469,-46.382,24.318)
C1': (-137.907,-44.638,25.919)
C3': (-137.065,-42.778,27.210)
O5': (-138.265,-41.264,24.803)
O4': (-138.775,-43.568,25.790)
C5': (-138.738,-41.218,26.125)
P: (-138.234,-39.992,23.909)
C4': (-138.492,-42.542,26.759)
C2': (-136.764,-44.247,26.861)
O2': (-136.851,-45.065,28.036)
N1: (-137.498,-45.040,24.580)
O4: (-136.715,-46.424,20.892)
O2: (-137.615,-47.209,25.179)
C6: (-137.384,-44.148,23.562)
C5: (-137.091,-44.532,22.314)
O3': (-136.950,-42.494,28.594)
OP1: (-134.484,-42.390,28.450)
OP2: (-135.718,-41.951,30.672)
C3': (-132.835,-39.112,27.343)
C1': (-132.491,-38.517,29.579)
C5': (-135.251,-39.749,27.649)
O6: (-128.847,-41.796,32.907)
O4': (-133.830,-38.892,29.384)
C8: (-132.422,-40.410,31.284)
C2: (-128.363,-39.251,30.519)
C6: (-129.114,-40.928,32.082)
C5: (-130.378,-40.578,31.638)
C4: (-130.502,-39.608,30.696)
P: (-135.648,-41.803,29.193)
C4': (-134.140,-38.814,27.990)
C2': (-131.845,-38.376,28.215)
O2': (-131.808,-37.006,27.880)
N1: (-128.128,-40.190,31.461)
N2: (-127.303,-38.642,30.016)
N3: (-129.548,-38.909,30.087)
N7: (-131.586,-41.100,32.005)
N9: (-131.827,-39.505,30.446)
O5': (-135.844,-40.276,28.809)
O3': (-132.823,-38.718,26.025)
OP2: (-135.718,-41.951,30.672)
C3': (-132.835,-39.112,27.343)
C1': (-132.491,-38.517,29.579)
C5': (-135.251,-39.749,27.649)
O6: (-128.847,-41.796,32.907)
O4': (-133.830,-38.892,29.384)
C8: (-132.422,-40.410,31.284)
C2: (-128.363,-39.251,30.519)
C6: (-129.114,-40.928,32.082)
C5: (-130.378,-40.578,31.638)
C4: (-130.502,-39.608,30.696)
P: (-135.648,-41.803,29.193)
C4': (-134.140,-38.814,27.990)
C2': (-131.845,-38.376,28.215)
O2': (-131.808,-37.006,27.880)
N1: (-128.128,-40.190,31.461)
N2: (-127.303,-38.642,30.016)
N3: (-129.548,-38.909,30.087)
N7: (-131.586,-41.100,32.005)
N9: (-131.827,-39.505,30.446)
O5': (-135.844,-40.276,28.809)
O3': (-132.823,-38.718,26.025)
Image (generated by PyMOL):