Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12445:12446
Extra
PDB:
ATOM 1 O3' A A2444 8.226 -59.301 44.370 1.00 50.68 O
ATOM 2 P C A2445 9.053 -58.657 45.594 1.00 48.25 P
ATOM 3 OP1 C A2445 8.225 -58.826 46.822 1.00 48.22 O
ATOM 4 OP2 C A2445 9.452 -57.284 45.187 1.00 47.84 O
ATOM 5 O5' C A2445 10.324 -59.613 45.649 1.00 48.35 O
ATOM 6 C5' C A2445 10.875 -60.067 46.877 1.00 48.21 C
ATOM 7 C4' C A2445 12.236 -60.698 46.669 1.00 48.26 C
ATOM 8 O4' C A2445 12.524 -60.769 45.250 1.00 48.48 O
ATOM 9 C3' C A2445 13.415 -59.937 47.235 1.00 47.77 C
ATOM 10 O3' C A2445 13.593 -60.137 48.631 1.00 47.61 O
ATOM 11 C2' C A2445 14.583 -60.438 46.374 1.00 47.92 C
ATOM 12 O2' C A2445 15.092 -61.698 46.825 1.00 48.20 O
ATOM 13 C1' C A2445 13.908 -60.659 45.031 1.00 48.30 C
ATOM 14 N1 C A2445 14.172 -59.564 44.107 1.00 48.07 N
ATOM 15 C2 C A2445 15.452 -59.533 43.587 1.00 47.99 C
ATOM 16 O2 C A2445 16.262 -60.435 43.894 1.00 48.13 O
ATOM 17 N3 C A2445 15.771 -58.553 42.743 1.00 47.80 N
ATOM 18 C4 C A2445 14.873 -57.646 42.440 1.00 47.68 C
ATOM 19 N4 C A2445 15.231 -56.704 41.601 1.00 47.51 N
ATOM 20 C5 C A2445 13.571 -57.635 42.964 1.00 47.75 C
ATOM 21 C6 C A2445 13.263 -58.622 43.798 1.00 47.95 C
ATOM 22 P A A2446 13.257 -58.963 49.674 1.00 50.61 P
ATOM 23 OP1 A A2446 13.864 -57.717 49.154 1.00 50.22 O
ATOM 24 OP2 A A2446 13.619 -59.435 50.995 1.00 50.53 O
ATOM 25 O5' A A2446 11.695 -58.878 49.611 1.00 50.80 O
TER
ATOM 1 O3' C B2445 13.593 -60.137 48.631 1.00 47.61 O
ATOM 2 P A B2446 13.257 -58.963 49.674 1.00 50.61 P
ATOM 3 OP1 A B2446 13.864 -57.717 49.154 1.00 50.22 O
ATOM 4 OP2 A B2446 13.619 -59.435 50.995 1.00 50.53 O
ATOM 5 O5' A B2446 11.695 -58.878 49.611 1.00 50.80 O
ATOM 6 C5' A B2446 11.042 -57.646 49.488 1.00 50.53 C
ATOM 7 C4' A B2446 10.666 -57.064 50.814 1.00 50.22 C
ATOM 8 O4' A B2446 11.418 -57.653 51.894 1.00 50.16 O
ATOM 9 C3' A B2446 10.978 -55.624 50.924 1.00 49.74 C
ATOM 10 O3' A B2446 10.053 -54.854 50.226 1.00 49.75 O
ATOM 11 C2' A B2446 11.041 -55.368 52.428 1.00 49.47 C
ATOM 12 O2' A B2446 9.776 -55.113 52.954 1.00 49.51 O
ATOM 13 C1' A B2446 11.497 -56.714 52.953 1.00 49.74 C
ATOM 14 N9 A B2446 12.868 -56.667 53.518 1.00 49.48 N
ATOM 15 C8 A B2446 13.951 -57.489 53.304 1.00 49.61 C
ATOM 16 N7 A B2446 15.012 -57.211 54.031 1.00 49.32 N
ATOM 17 C5 A B2446 14.588 -56.136 54.801 1.00 48.97 C
ATOM 18 C6 A B2446 15.240 -55.394 55.790 1.00 48.58 C
ATOM 19 N6 A B2446 16.503 -55.673 56.132 1.00 48.49 N
ATOM 20 N1 A B2446 14.567 -54.364 56.377 1.00 48.31 N
ATOM 21 C2 A B2446 13.325 -54.143 56.004 1.00 48.44 C
ATOM 22 N3 A B2446 12.594 -54.802 55.098 1.00 48.80 N
ATOM 23 C4 A B2446 13.287 -55.789 54.506 1.00 49.06 C
ATOM 24 P A B2447 10.548 -53.977 48.996 1.00 49.79 P
ATOM 25 OP1 A B2447 9.360 -53.727 48.104 1.00 50.02 O
ATOM 26 OP2 A B2447 11.756 -54.653 48.438 1.00 49.89 O
ATOM 27 O5' A B2447 10.936 -52.651 49.738 1.00 49.26 O
TER
ATOM 2 P C A2445 9.053 -58.657 45.594 1.00 48.25 P
ATOM 3 OP1 C A2445 8.225 -58.826 46.822 1.00 48.22 O
ATOM 4 OP2 C A2445 9.452 -57.284 45.187 1.00 47.84 O
ATOM 5 O5' C A2445 10.324 -59.613 45.649 1.00 48.35 O
ATOM 6 C5' C A2445 10.875 -60.067 46.877 1.00 48.21 C
ATOM 7 C4' C A2445 12.236 -60.698 46.669 1.00 48.26 C
ATOM 8 O4' C A2445 12.524 -60.769 45.250 1.00 48.48 O
ATOM 9 C3' C A2445 13.415 -59.937 47.235 1.00 47.77 C
ATOM 10 O3' C A2445 13.593 -60.137 48.631 1.00 47.61 O
ATOM 11 C2' C A2445 14.583 -60.438 46.374 1.00 47.92 C
ATOM 12 O2' C A2445 15.092 -61.698 46.825 1.00 48.20 O
ATOM 13 C1' C A2445 13.908 -60.659 45.031 1.00 48.30 C
ATOM 14 N1 C A2445 14.172 -59.564 44.107 1.00 48.07 N
ATOM 15 C2 C A2445 15.452 -59.533 43.587 1.00 47.99 C
ATOM 16 O2 C A2445 16.262 -60.435 43.894 1.00 48.13 O
ATOM 17 N3 C A2445 15.771 -58.553 42.743 1.00 47.80 N
ATOM 18 C4 C A2445 14.873 -57.646 42.440 1.00 47.68 C
ATOM 19 N4 C A2445 15.231 -56.704 41.601 1.00 47.51 N
ATOM 20 C5 C A2445 13.571 -57.635 42.964 1.00 47.75 C
ATOM 21 C6 C A2445 13.263 -58.622 43.798 1.00 47.95 C
ATOM 22 P A A2446 13.257 -58.963 49.674 1.00 50.61 P
ATOM 23 OP1 A A2446 13.864 -57.717 49.154 1.00 50.22 O
ATOM 24 OP2 A A2446 13.619 -59.435 50.995 1.00 50.53 O
ATOM 25 O5' A A2446 11.695 -58.878 49.611 1.00 50.80 O
TER
ATOM 1 O3' C B2445 13.593 -60.137 48.631 1.00 47.61 O
ATOM 2 P A B2446 13.257 -58.963 49.674 1.00 50.61 P
ATOM 3 OP1 A B2446 13.864 -57.717 49.154 1.00 50.22 O
ATOM 4 OP2 A B2446 13.619 -59.435 50.995 1.00 50.53 O
ATOM 5 O5' A B2446 11.695 -58.878 49.611 1.00 50.80 O
ATOM 6 C5' A B2446 11.042 -57.646 49.488 1.00 50.53 C
ATOM 7 C4' A B2446 10.666 -57.064 50.814 1.00 50.22 C
ATOM 8 O4' A B2446 11.418 -57.653 51.894 1.00 50.16 O
ATOM 9 C3' A B2446 10.978 -55.624 50.924 1.00 49.74 C
ATOM 10 O3' A B2446 10.053 -54.854 50.226 1.00 49.75 O
ATOM 11 C2' A B2446 11.041 -55.368 52.428 1.00 49.47 C
ATOM 12 O2' A B2446 9.776 -55.113 52.954 1.00 49.51 O
ATOM 13 C1' A B2446 11.497 -56.714 52.953 1.00 49.74 C
ATOM 14 N9 A B2446 12.868 -56.667 53.518 1.00 49.48 N
ATOM 15 C8 A B2446 13.951 -57.489 53.304 1.00 49.61 C
ATOM 16 N7 A B2446 15.012 -57.211 54.031 1.00 49.32 N
ATOM 17 C5 A B2446 14.588 -56.136 54.801 1.00 48.97 C
ATOM 18 C6 A B2446 15.240 -55.394 55.790 1.00 48.58 C
ATOM 19 N6 A B2446 16.503 -55.673 56.132 1.00 48.49 N
ATOM 20 N1 A B2446 14.567 -54.364 56.377 1.00 48.31 N
ATOM 21 C2 A B2446 13.325 -54.143 56.004 1.00 48.44 C
ATOM 22 N3 A B2446 12.594 -54.802 55.098 1.00 48.80 N
ATOM 23 C4 A B2446 13.287 -55.789 54.506 1.00 49.06 C
ATOM 24 P A B2447 10.548 -53.977 48.996 1.00 49.79 P
ATOM 25 OP1 A B2447 9.360 -53.727 48.104 1.00 50.02 O
ATOM 26 OP2 A B2447 11.756 -54.653 48.438 1.00 49.89 O
ATOM 27 O5' A B2447 10.936 -52.651 49.738 1.00 49.26 O
TER
Atoms:
C2: (15.452,-59.533,43.587)
OP1: (8.225,-58.826,46.822)
OP2: (9.452,-57.284,45.187)
C4: (14.873,-57.646,42.440)
O5': (10.324,-59.613,45.649)
C3': (13.415,-59.937,47.235)
C1': (13.908,-60.659,45.031)
O4': (12.524,-60.769,45.250)
C5': (10.875,-60.067,46.877)
P: (9.053,-58.657,45.594)
O2: (16.262,-60.435,43.894)
C4': (12.236,-60.698,46.669)
C2': (14.583,-60.438,46.374)
O2': (15.092,-61.698,46.825)
N1: (14.172,-59.564,44.107)
N3: (15.771,-58.553,42.743)
N4: (15.231,-56.704,41.601)
C6: (13.263,-58.622,43.798)
C5: (13.571,-57.635,42.964)
O3': (13.593,-60.137,48.631)
OP1: (8.225,-58.826,46.822)
OP2: (9.452,-57.284,45.187)
C4: (14.873,-57.646,42.440)
O5': (10.324,-59.613,45.649)
C3': (13.415,-59.937,47.235)
C1': (13.908,-60.659,45.031)
O4': (12.524,-60.769,45.250)
C5': (10.875,-60.067,46.877)
P: (9.053,-58.657,45.594)
O2: (16.262,-60.435,43.894)
C4': (12.236,-60.698,46.669)
C2': (14.583,-60.438,46.374)
O2': (15.092,-61.698,46.825)
N1: (14.172,-59.564,44.107)
N3: (15.771,-58.553,42.743)
N4: (15.231,-56.704,41.601)
C6: (13.263,-58.622,43.798)
C5: (13.571,-57.635,42.964)
O3': (13.593,-60.137,48.631)
OP1: (13.864,-57.717,49.154)
OP2: (13.619,-59.435,50.995)
C3': (10.978,-55.624,50.924)
C1': (11.497,-56.714,52.953)
C5': (11.042,-57.646,49.488)
O4': (11.418,-57.653,51.894)
C8: (13.951,-57.489,53.304)
O2': (9.776,-55.113,52.954)
C6: (15.240,-55.394,55.790)
C5: (14.588,-56.136,54.801)
C4: (13.287,-55.789,54.506)
P: (13.257,-58.963,49.674)
C4': (10.666,-57.064,50.814)
C2': (11.041,-55.368,52.428)
C2: (13.325,-54.143,56.004)
N1: (14.567,-54.364,56.377)
N3: (12.594,-54.802,55.098)
N6: (16.503,-55.673,56.132)
N7: (15.012,-57.211,54.031)
N9: (12.868,-56.667,53.518)
O5': (11.695,-58.878,49.611)
O3': (10.053,-54.854,50.226)
OP2: (13.619,-59.435,50.995)
C3': (10.978,-55.624,50.924)
C1': (11.497,-56.714,52.953)
C5': (11.042,-57.646,49.488)
O4': (11.418,-57.653,51.894)
C8: (13.951,-57.489,53.304)
O2': (9.776,-55.113,52.954)
C6: (15.240,-55.394,55.790)
C5: (14.588,-56.136,54.801)
C4: (13.287,-55.789,54.506)
P: (13.257,-58.963,49.674)
C4': (10.666,-57.064,50.814)
C2': (11.041,-55.368,52.428)
C2: (13.325,-54.143,56.004)
N1: (14.567,-54.364,56.377)
N3: (12.594,-54.802,55.098)
N6: (16.503,-55.673,56.132)
N7: (15.012,-57.211,54.031)
N9: (12.868,-56.667,53.518)
O5': (11.695,-58.878,49.611)
O3': (10.053,-54.854,50.226)
Image (generated by PyMOL):