Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0582:0581
Extra
PDB:
ATOM 1 O3' A A 581 0.381 106.956 97.491 1.00 54.72 O
ATOM 2 P C A 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 3 OP1 C A 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 4 OP2 C A 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 5 O5' C A 582 -0.868 107.247 95.334 1.00 51.66 O
ATOM 6 C5' C A 582 0.261 107.127 94.461 1.00 49.79 C
ATOM 7 C4' C A 582 -0.057 106.222 93.295 1.00 50.63 C
ATOM 8 O4' C A 582 -0.387 104.893 93.777 1.00 51.65 O
ATOM 9 C3' C A 582 -1.245 106.603 92.428 1.00 48.99 C
ATOM 10 O3' C A 582 -0.909 107.616 91.494 1.00 47.04 O
ATOM 11 C2' C A 582 -1.567 105.278 91.754 1.00 50.36 C
ATOM 12 O2' C A 582 -0.672 104.958 90.706 1.00 48.00 O
ATOM 13 C1' C A 582 -1.347 104.299 92.911 1.00 51.97 C
ATOM 14 N1 C A 582 -2.585 104.046 93.682 1.00 55.33 N
ATOM 15 C2 C A 582 -3.502 103.073 93.215 1.00 56.25 C
ATOM 16 O2 C A 582 -3.224 102.408 92.198 1.00 55.03 O
ATOM 17 N3 C A 582 -4.661 102.886 93.894 1.00 56.32 N
ATOM 18 C4 C A 582 -4.919 103.606 94.990 1.00 55.86 C
ATOM 19 N4 C A 582 -6.090 103.415 95.603 1.00 56.10 N
ATOM 20 C5 C A 582 -3.994 104.566 95.502 1.00 54.45 C
ATOM 21 C6 C A 582 -2.856 104.754 94.824 1.00 54.14 C
ATOM 22 P U A 583 -2.023 108.678 91.033 1.00 48.25 P
ATOM 23 OP1 U A 583 -1.428 109.477 89.930 1.00 48.18 O
ATOM 24 OP2 U A 583 -2.563 109.380 92.224 1.00 43.52 O
ATOM 25 O5' U A 583 -3.162 107.760 90.404 1.00 46.76 O
TER
ATOM 1 O3' G B 580 -2.042 103.263 101.602 1.00 58.54 O
ATOM 2 P A B 581 -2.722 104.612 101.063 1.00 61.51 P
ATOM 3 OP1 A B 581 -2.700 105.594 102.183 1.00 59.67 O
ATOM 4 OP2 A B 581 -4.006 104.287 100.396 1.00 60.67 O
ATOM 5 O5' A B 581 -1.708 105.112 99.941 1.00 62.23 O
ATOM 6 C5' A B 581 -0.355 105.496 100.268 1.00 60.26 C
ATOM 7 C4' A B 581 0.569 105.168 99.117 1.00 60.68 C
ATOM 8 O4' A B 581 0.727 103.731 99.009 1.00 62.22 O
ATOM 9 C3' A B 581 0.071 105.598 97.748 1.00 58.88 C
ATOM 10 O3' A B 581 0.381 106.956 97.491 1.00 54.72 O
ATOM 11 C2' A B 581 0.810 104.650 96.818 1.00 60.60 C
ATOM 12 O2' A B 581 2.140 105.062 96.597 1.00 61.65 O
ATOM 13 C1' A B 581 0.800 103.359 97.641 1.00 63.70 C
ATOM 14 N9 A B 581 -0.351 102.507 97.353 1.00 68.23 N
ATOM 15 C8 A B 581 -1.397 102.213 98.189 1.00 70.67 C
ATOM 16 N7 A B 581 -2.310 101.447 97.644 1.00 73.45 N
ATOM 17 C5 A B 581 -1.831 101.217 96.365 1.00 73.16 C
ATOM 18 C6 A B 581 -2.350 100.489 95.279 1.00 74.81 C
ATOM 19 N6 A B 581 -3.515 99.836 95.313 1.00 75.83 N
ATOM 20 N1 A B 581 -1.625 100.458 94.141 1.00 75.32 N
ATOM 21 C2 A B 581 -0.460 101.116 94.109 1.00 75.98 C
ATOM 22 N3 A B 581 0.132 101.837 95.063 1.00 74.88 N
ATOM 23 C4 A B 581 -0.617 101.850 96.177 1.00 71.72 C
ATOM 24 P C B 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 25 OP1 C B 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 26 OP2 C B 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 27 O5' C B 582 -0.868 107.247 95.334 1.00 51.66 O
TER
ATOM 2 P C A 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 3 OP1 C A 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 4 OP2 C A 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 5 O5' C A 582 -0.868 107.247 95.334 1.00 51.66 O
ATOM 6 C5' C A 582 0.261 107.127 94.461 1.00 49.79 C
ATOM 7 C4' C A 582 -0.057 106.222 93.295 1.00 50.63 C
ATOM 8 O4' C A 582 -0.387 104.893 93.777 1.00 51.65 O
ATOM 9 C3' C A 582 -1.245 106.603 92.428 1.00 48.99 C
ATOM 10 O3' C A 582 -0.909 107.616 91.494 1.00 47.04 O
ATOM 11 C2' C A 582 -1.567 105.278 91.754 1.00 50.36 C
ATOM 12 O2' C A 582 -0.672 104.958 90.706 1.00 48.00 O
ATOM 13 C1' C A 582 -1.347 104.299 92.911 1.00 51.97 C
ATOM 14 N1 C A 582 -2.585 104.046 93.682 1.00 55.33 N
ATOM 15 C2 C A 582 -3.502 103.073 93.215 1.00 56.25 C
ATOM 16 O2 C A 582 -3.224 102.408 92.198 1.00 55.03 O
ATOM 17 N3 C A 582 -4.661 102.886 93.894 1.00 56.32 N
ATOM 18 C4 C A 582 -4.919 103.606 94.990 1.00 55.86 C
ATOM 19 N4 C A 582 -6.090 103.415 95.603 1.00 56.10 N
ATOM 20 C5 C A 582 -3.994 104.566 95.502 1.00 54.45 C
ATOM 21 C6 C A 582 -2.856 104.754 94.824 1.00 54.14 C
ATOM 22 P U A 583 -2.023 108.678 91.033 1.00 48.25 P
ATOM 23 OP1 U A 583 -1.428 109.477 89.930 1.00 48.18 O
ATOM 24 OP2 U A 583 -2.563 109.380 92.224 1.00 43.52 O
ATOM 25 O5' U A 583 -3.162 107.760 90.404 1.00 46.76 O
TER
ATOM 1 O3' G B 580 -2.042 103.263 101.602 1.00 58.54 O
ATOM 2 P A B 581 -2.722 104.612 101.063 1.00 61.51 P
ATOM 3 OP1 A B 581 -2.700 105.594 102.183 1.00 59.67 O
ATOM 4 OP2 A B 581 -4.006 104.287 100.396 1.00 60.67 O
ATOM 5 O5' A B 581 -1.708 105.112 99.941 1.00 62.23 O
ATOM 6 C5' A B 581 -0.355 105.496 100.268 1.00 60.26 C
ATOM 7 C4' A B 581 0.569 105.168 99.117 1.00 60.68 C
ATOM 8 O4' A B 581 0.727 103.731 99.009 1.00 62.22 O
ATOM 9 C3' A B 581 0.071 105.598 97.748 1.00 58.88 C
ATOM 10 O3' A B 581 0.381 106.956 97.491 1.00 54.72 O
ATOM 11 C2' A B 581 0.810 104.650 96.818 1.00 60.60 C
ATOM 12 O2' A B 581 2.140 105.062 96.597 1.00 61.65 O
ATOM 13 C1' A B 581 0.800 103.359 97.641 1.00 63.70 C
ATOM 14 N9 A B 581 -0.351 102.507 97.353 1.00 68.23 N
ATOM 15 C8 A B 581 -1.397 102.213 98.189 1.00 70.67 C
ATOM 16 N7 A B 581 -2.310 101.447 97.644 1.00 73.45 N
ATOM 17 C5 A B 581 -1.831 101.217 96.365 1.00 73.16 C
ATOM 18 C6 A B 581 -2.350 100.489 95.279 1.00 74.81 C
ATOM 19 N6 A B 581 -3.515 99.836 95.313 1.00 75.83 N
ATOM 20 N1 A B 581 -1.625 100.458 94.141 1.00 75.32 N
ATOM 21 C2 A B 581 -0.460 101.116 94.109 1.00 75.98 C
ATOM 22 N3 A B 581 0.132 101.837 95.063 1.00 74.88 N
ATOM 23 C4 A B 581 -0.617 101.850 96.177 1.00 71.72 C
ATOM 24 P C B 582 -0.705 107.893 96.781 1.00 53.11 P
ATOM 25 OP1 C B 582 -0.113 109.245 96.646 1.00 53.37 O
ATOM 26 OP2 C B 582 -1.981 107.732 97.509 1.00 56.01 O
ATOM 27 O5' C B 582 -0.868 107.247 95.334 1.00 51.66 O
TER
Atoms:
C2: (-3.502,103.073,93.215)
OP1: (-0.113,109.245,96.646)
OP2: (-1.981,107.732,97.509)
C4: (-4.919,103.606,94.990)
O5': (-0.868,107.247,95.334)
C3': (-1.245,106.603,92.428)
C1': (-1.347,104.299,92.911)
O4': (-0.387,104.893,93.777)
C5': (0.261,107.127,94.461)
P: (-0.705,107.893,96.781)
O2: (-3.224,102.408,92.198)
C4': (-0.057,106.222,93.295)
C2': (-1.567,105.278,91.754)
O2': (-0.672,104.958,90.706)
N1: (-2.585,104.046,93.682)
N3: (-4.661,102.886,93.894)
N4: (-6.090,103.415,95.603)
C6: (-2.856,104.754,94.824)
C5: (-3.994,104.566,95.502)
O3': (-0.909,107.616,91.494)
OP1: (-0.113,109.245,96.646)
OP2: (-1.981,107.732,97.509)
C4: (-4.919,103.606,94.990)
O5': (-0.868,107.247,95.334)
C3': (-1.245,106.603,92.428)
C1': (-1.347,104.299,92.911)
O4': (-0.387,104.893,93.777)
C5': (0.261,107.127,94.461)
P: (-0.705,107.893,96.781)
O2: (-3.224,102.408,92.198)
C4': (-0.057,106.222,93.295)
C2': (-1.567,105.278,91.754)
O2': (-0.672,104.958,90.706)
N1: (-2.585,104.046,93.682)
N3: (-4.661,102.886,93.894)
N4: (-6.090,103.415,95.603)
C6: (-2.856,104.754,94.824)
C5: (-3.994,104.566,95.502)
O3': (-0.909,107.616,91.494)
OP1: (-2.700,105.594,102.183)
OP2: (-4.006,104.287,100.396)
C3': (0.071,105.598,97.748)
C1': (0.800,103.359,97.641)
C5': (-0.355,105.496,100.268)
O4': (0.727,103.731,99.009)
C8: (-1.397,102.213,98.189)
O2': (2.140,105.062,96.597)
C6: (-2.350,100.489,95.279)
C5: (-1.831,101.217,96.365)
C4: (-0.617,101.850,96.177)
P: (-2.722,104.612,101.063)
C4': (0.569,105.168,99.117)
C2': (0.810,104.650,96.818)
C2: (-0.460,101.116,94.109)
N1: (-1.625,100.458,94.141)
N3: (0.132,101.837,95.063)
N6: (-3.515,99.836,95.313)
N7: (-2.310,101.447,97.644)
N9: (-0.351,102.507,97.353)
O5': (-1.708,105.112,99.941)
O3': (0.381,106.956,97.491)
OP2: (-4.006,104.287,100.396)
C3': (0.071,105.598,97.748)
C1': (0.800,103.359,97.641)
C5': (-0.355,105.496,100.268)
O4': (0.727,103.731,99.009)
C8: (-1.397,102.213,98.189)
O2': (2.140,105.062,96.597)
C6: (-2.350,100.489,95.279)
C5: (-1.831,101.217,96.365)
C4: (-0.617,101.850,96.177)
P: (-2.722,104.612,101.063)
C4': (0.569,105.168,99.117)
C2': (0.810,104.650,96.818)
C2: (-0.460,101.116,94.109)
N1: (-1.625,100.458,94.141)
N3: (0.132,101.837,95.063)
N6: (-3.515,99.836,95.313)
N7: (-2.310,101.447,97.644)
N9: (-0.351,102.507,97.353)
O5': (-1.708,105.112,99.941)
O3': (0.381,106.956,97.491)
Image (generated by PyMOL):