ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A805:A806

Extra

PDB:
ATOM 1 O3' C A 804 -2.935 93.661 52.216 1.00 19.58 O
ATOM 2 P U A 805 -3.641 94.814 51.328 1.00 53.03 P
ATOM 3 OP1 U A 805 -3.271 94.577 49.908 1.00 69.32 O
ATOM 4 OP2 U A 805 -3.325 96.123 51.953 1.00 68.82 O
ATOM 5 O5' U A 805 -5.209 94.560 51.499 1.00 4.37 O
ATOM 6 C5' U A 805 -5.906 93.695 50.604 1.00 4.37 C
ATOM 7 C4' U A 805 -7.365 93.631 50.972 1.00 4.37 C
ATOM 8 O4' U A 805 -7.471 93.322 52.380 1.00 4.37 O
ATOM 9 C3' U A 805 -8.162 94.911 50.794 1.00 5.38 C
ATOM 10 O3' U A 805 -8.677 94.992 49.473 1.00 7.81 O
ATOM 11 C2' U A 805 -9.283 94.750 51.819 1.00 5.10 C
ATOM 12 O2' U A 805 -10.345 93.929 51.390 1.00 6.04 O
ATOM 13 C1' U A 805 -8.561 94.021 52.950 1.00 4.37 C
ATOM 14 N1 U A 805 -8.027 94.947 53.960 1.00 20.59 N
ATOM 15 C2 U A 805 -8.927 95.562 54.814 1.00 19.59 C
ATOM 16 O2 U A 805 -10.132 95.384 54.748 1.00 22.82 O
ATOM 17 N3 U A 805 -8.363 96.402 55.740 1.00 16.78 N
ATOM 18 C4 U A 805 -7.021 96.690 55.890 1.00 18.76 C
ATOM 19 O4 U A 805 -6.665 97.483 56.767 1.00 21.40 O
ATOM 20 C5 U A 805 -6.159 96.021 54.963 1.00 18.63 C
ATOM 21 C6 U A 805 -6.676 95.196 54.056 1.00 20.64 C
ATOM 22 P A A 806 -8.125 96.113 48.473 1.00 66.78 P
ATOM 23 OP1 A A 806 -8.715 95.834 47.137 1.00 70.82 O
ATOM 24 OP2 A A 806 -6.645 96.214 48.618 1.00 69.10 O
ATOM 25 O5' A A 806 -8.803 97.442 49.017 1.00 19.42 O
TER

ATOM 1 O3' U B 805 -8.677 94.992 49.473 1.00 7.81 O
ATOM 2 P A B 806 -8.125 96.113 48.473 1.00 66.78 P
ATOM 3 OP1 A B 806 -8.715 95.834 47.137 1.00 70.82 O
ATOM 4 OP2 A B 806 -6.645 96.214 48.618 1.00 69.10 O
ATOM 5 O5' A B 806 -8.803 97.442 49.017 1.00 19.42 O
ATOM 6 C5' A B 806 -10.232 97.557 49.063 1.00 20.96 C
ATOM 7 C4' A B 806 -10.756 98.144 47.767 1.00 21.13 C
ATOM 8 O4' A B 806 -12.185 97.925 47.713 1.00 23.44 O
ATOM 9 C3' A B 806 -10.585 99.642 47.530 1.00 20.72 C
ATOM 10 O3' A B 806 -9.318 99.986 46.956 1.00 20.82 O
ATOM 11 C2' A B 806 -11.705 99.933 46.548 1.00 22.16 C
ATOM 12 O2' A B 806 -11.333 99.536 45.246 1.00 21.18 O
ATOM 13 C1' A B 806 -12.804 98.991 47.032 1.00 23.76 C
ATOM 14 N9 A B 806 -13.713 99.654 47.956 1.00 48.85 N
ATOM 15 C8 A B 806 -13.468 100.008 49.251 1.00 49.13 C
ATOM 16 N7 A B 806 -14.459 100.637 49.822 1.00 50.56 N
ATOM 17 C5 A B 806 -15.427 100.695 48.835 1.00 50.55 C
ATOM 18 C6 A B 806 -16.711 101.253 48.807 1.00 51.06 C
ATOM 19 N6 A B 806 -17.254 101.910 49.836 1.00 51.49 N
ATOM 20 N1 A B 806 -17.428 101.123 47.671 1.00 51.67 N
ATOM 21 C2 A B 806 -16.871 100.487 46.638 1.00 52.02 C
ATOM 22 N3 A B 806 -15.665 99.934 46.540 1.00 51.15 N
ATOM 23 C4 A B 806 -14.987 100.076 47.687 1.00 49.52 C
ATOM 24 P G B 807 -8.853 101.539 46.912 1.00 47.68 P
ATOM 25 OP1 G B 807 -7.509 101.602 46.287 1.00 64.84 O
ATOM 26 OP2 G B 807 -9.057 102.131 48.261 1.00 65.63 O
ATOM 27 O5' G B 807 -9.905 102.215 45.917 1.00 37.81 O
TER

Atoms:
C4: (-7.021,96.690,55.890)
N3: (-8.363,96.402,55.740)
OP1: (-3.271,94.577,49.908)
OP2: (-3.325,96.123,51.953)
C2: (-8.927,95.562,54.814)
C1': (-8.561,94.021,52.950)
C3': (-8.162,94.911,50.794)
O5': (-5.209,94.560,51.499)
O4': (-7.471,93.322,52.380)
C5': (-5.906,93.695,50.604)
P: (-3.641,94.814,51.328)
C4': (-7.365,93.631,50.972)
C2': (-9.283,94.750,51.819)
O2': (-10.345,93.929,51.390)
N1: (-8.027,94.947,53.960)
O4: (-6.665,97.483,56.767)
O2: (-10.132,95.384,54.748)
C6: (-6.676,95.196,54.056)
C5: (-6.159,96.021,54.963)
O3': (-8.677,94.992,49.473)
OP1: (-8.715,95.834,47.137)
OP2: (-6.645,96.214,48.618)
C3': (-10.585,99.642,47.530)
C1': (-12.804,98.991,47.032)
C5': (-10.232,97.557,49.063)
O4': (-12.185,97.925,47.713)
C8: (-13.468,100.008,49.251)
O2': (-11.333,99.536,45.246)
C6: (-16.711,101.253,48.807)
C5: (-15.427,100.695,48.835)
C4: (-14.987,100.076,47.687)
P: (-8.125,96.113,48.473)
C4': (-10.756,98.144,47.767)
C2': (-11.705,99.933,46.548)
C2: (-16.871,100.487,46.638)
N1: (-17.428,101.123,47.671)
N3: (-15.665,99.934,46.540)
N6: (-17.254,101.910,49.836)
N7: (-14.459,100.637,49.822)
N9: (-13.713,99.654,47.956)
O5': (-8.803,97.442,49.017)
O3': (-9.318,99.986,46.956)
Image (generated by PyMOL):
PyMOL image
show in jmol