Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0462:0461
Extra
PDB:
ATOM 1 O3' A A 461 65.442 134.387 56.777 1.00 36.05 O
ATOM 2 P C A 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 3 OP1 C A 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 4 OP2 C A 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 5 O5' C A 462 63.196 135.056 57.722 1.00 32.30 O
ATOM 6 C5' C A 462 63.408 134.579 59.061 1.00 33.48 C
ATOM 7 C4' C A 462 62.860 135.555 60.075 1.00 33.39 C
ATOM 8 O4' C A 462 63.497 136.860 59.923 1.00 34.41 O
ATOM 9 C3' C A 462 61.386 135.904 59.971 1.00 33.05 C
ATOM 10 O3' C A 462 60.553 134.869 60.479 1.00 32.55 O
ATOM 11 C2' C A 462 61.326 137.154 60.835 1.00 31.32 C
ATOM 12 O2' C A 462 61.409 136.823 62.198 1.00 33.32 O
ATOM 13 C1' C A 462 62.627 137.861 60.439 1.00 32.00 C
ATOM 14 N1 C A 462 62.397 138.912 59.422 1.00 30.60 N
ATOM 15 C2 C A 462 61.817 140.108 59.836 1.00 29.07 C
ATOM 16 O2 C A 462 61.593 140.278 61.034 1.00 33.79 O
ATOM 17 N3 C A 462 61.520 141.051 58.931 1.00 26.27 N
ATOM 18 C4 C A 462 61.797 140.853 57.650 1.00 28.32 C
ATOM 19 N4 C A 462 61.454 141.818 56.788 1.00 28.17 N
ATOM 20 C5 C A 462 62.431 139.661 57.192 1.00 27.41 C
ATOM 21 C6 C A 462 62.711 138.724 58.105 1.00 29.64 C
ATOM 22 P G A 463 59.065 134.672 59.888 1.00 34.25 P
ATOM 23 OP1 G A 463 58.347 133.714 60.765 1.00 35.06 O
ATOM 24 OP2 G A 463 59.144 134.399 58.433 1.00 34.42 O
ATOM 25 O5' G A 463 58.384 136.101 60.068 1.00 33.76 O
TER
ATOM 1 O3' A B 460 70.570 136.607 53.849 1.00 35.03 O
ATOM 2 P A B 461 69.155 136.896 53.155 1.00 37.70 P
ATOM 3 OP1 A B 461 68.988 135.857 52.125 1.00 36.63 O
ATOM 4 OP2 A B 461 69.104 138.323 52.765 1.00 39.79 O
ATOM 5 O5' A B 461 68.077 136.679 54.304 1.00 35.48 O
ATOM 6 C5' A B 461 67.900 135.399 54.903 1.00 35.27 C
ATOM 7 C4' A B 461 67.560 135.552 56.365 1.00 38.33 C
ATOM 8 O4' A B 461 68.095 136.819 56.851 1.00 37.32 O
ATOM 9 C3' A B 461 66.092 135.650 56.750 1.00 37.35 C
ATOM 10 O3' A B 461 65.442 134.387 56.777 1.00 36.05 O
ATOM 11 C2' A B 461 66.201 136.248 58.144 1.00 36.73 C
ATOM 12 O2' A B 461 66.671 135.295 59.084 1.00 35.18 O
ATOM 13 C1' A B 461 67.288 137.299 57.918 1.00 35.82 C
ATOM 14 N9 A B 461 66.729 138.595 57.529 1.00 35.70 N
ATOM 15 C8 A B 461 66.731 139.169 56.284 1.00 36.17 C
ATOM 16 N7 A B 461 66.137 140.336 56.241 1.00 36.90 N
ATOM 17 C5 A B 461 65.721 140.549 57.544 1.00 34.75 C
ATOM 18 C6 A B 461 65.044 141.615 58.153 1.00 35.93 C
ATOM 19 N6 A B 461 64.667 142.719 57.505 1.00 34.79 N
ATOM 20 N1 A B 461 64.773 141.516 59.473 1.00 37.20 N
ATOM 21 C2 A B 461 65.177 140.419 60.127 1.00 38.42 C
ATOM 22 N3 A B 461 65.833 139.358 59.666 1.00 38.27 N
ATOM 23 C4 A B 461 66.078 139.486 58.350 1.00 36.05 C
ATOM 24 P C B 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 25 OP1 C B 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 26 OP2 C B 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 27 O5' C B 462 63.196 135.056 57.722 1.00 32.30 O
TER
ATOM 2 P C A 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 3 OP1 C A 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 4 OP2 C A 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 5 O5' C A 462 63.196 135.056 57.722 1.00 32.30 O
ATOM 6 C5' C A 462 63.408 134.579 59.061 1.00 33.48 C
ATOM 7 C4' C A 462 62.860 135.555 60.075 1.00 33.39 C
ATOM 8 O4' C A 462 63.497 136.860 59.923 1.00 34.41 O
ATOM 9 C3' C A 462 61.386 135.904 59.971 1.00 33.05 C
ATOM 10 O3' C A 462 60.553 134.869 60.479 1.00 32.55 O
ATOM 11 C2' C A 462 61.326 137.154 60.835 1.00 31.32 C
ATOM 12 O2' C A 462 61.409 136.823 62.198 1.00 33.32 O
ATOM 13 C1' C A 462 62.627 137.861 60.439 1.00 32.00 C
ATOM 14 N1 C A 462 62.397 138.912 59.422 1.00 30.60 N
ATOM 15 C2 C A 462 61.817 140.108 59.836 1.00 29.07 C
ATOM 16 O2 C A 462 61.593 140.278 61.034 1.00 33.79 O
ATOM 17 N3 C A 462 61.520 141.051 58.931 1.00 26.27 N
ATOM 18 C4 C A 462 61.797 140.853 57.650 1.00 28.32 C
ATOM 19 N4 C A 462 61.454 141.818 56.788 1.00 28.17 N
ATOM 20 C5 C A 462 62.431 139.661 57.192 1.00 27.41 C
ATOM 21 C6 C A 462 62.711 138.724 58.105 1.00 29.64 C
ATOM 22 P G A 463 59.065 134.672 59.888 1.00 34.25 P
ATOM 23 OP1 G A 463 58.347 133.714 60.765 1.00 35.06 O
ATOM 24 OP2 G A 463 59.144 134.399 58.433 1.00 34.42 O
ATOM 25 O5' G A 463 58.384 136.101 60.068 1.00 33.76 O
TER
ATOM 1 O3' A B 460 70.570 136.607 53.849 1.00 35.03 O
ATOM 2 P A B 461 69.155 136.896 53.155 1.00 37.70 P
ATOM 3 OP1 A B 461 68.988 135.857 52.125 1.00 36.63 O
ATOM 4 OP2 A B 461 69.104 138.323 52.765 1.00 39.79 O
ATOM 5 O5' A B 461 68.077 136.679 54.304 1.00 35.48 O
ATOM 6 C5' A B 461 67.900 135.399 54.903 1.00 35.27 C
ATOM 7 C4' A B 461 67.560 135.552 56.365 1.00 38.33 C
ATOM 8 O4' A B 461 68.095 136.819 56.851 1.00 37.32 O
ATOM 9 C3' A B 461 66.092 135.650 56.750 1.00 37.35 C
ATOM 10 O3' A B 461 65.442 134.387 56.777 1.00 36.05 O
ATOM 11 C2' A B 461 66.201 136.248 58.144 1.00 36.73 C
ATOM 12 O2' A B 461 66.671 135.295 59.084 1.00 35.18 O
ATOM 13 C1' A B 461 67.288 137.299 57.918 1.00 35.82 C
ATOM 14 N9 A B 461 66.729 138.595 57.529 1.00 35.70 N
ATOM 15 C8 A B 461 66.731 139.169 56.284 1.00 36.17 C
ATOM 16 N7 A B 461 66.137 140.336 56.241 1.00 36.90 N
ATOM 17 C5 A B 461 65.721 140.549 57.544 1.00 34.75 C
ATOM 18 C6 A B 461 65.044 141.615 58.153 1.00 35.93 C
ATOM 19 N6 A B 461 64.667 142.719 57.505 1.00 34.79 N
ATOM 20 N1 A B 461 64.773 141.516 59.473 1.00 37.20 N
ATOM 21 C2 A B 461 65.177 140.419 60.127 1.00 38.42 C
ATOM 22 N3 A B 461 65.833 139.358 59.666 1.00 38.27 N
ATOM 23 C4 A B 461 66.078 139.486 58.350 1.00 36.05 C
ATOM 24 P C B 462 63.863 134.303 56.487 1.00 36.74 P
ATOM 25 OP1 C B 462 63.528 132.864 56.563 1.00 35.89 O
ATOM 26 OP2 C B 462 63.553 135.062 55.249 1.00 36.34 O
ATOM 27 O5' C B 462 63.196 135.056 57.722 1.00 32.30 O
TER
Atoms:
C2: (61.817,140.108,59.836)
OP1: (63.528,132.864,56.563)
OP2: (63.553,135.062,55.249)
C4: (61.797,140.853,57.650)
O5': (63.196,135.056,57.722)
C3': (61.386,135.904,59.971)
C1': (62.627,137.861,60.439)
O4': (63.497,136.860,59.923)
C5': (63.408,134.579,59.061)
P: (63.863,134.303,56.487)
O2: (61.593,140.278,61.034)
C4': (62.860,135.555,60.075)
C2': (61.326,137.154,60.835)
O2': (61.409,136.823,62.198)
N1: (62.397,138.912,59.422)
N3: (61.520,141.051,58.931)
N4: (61.454,141.818,56.788)
C6: (62.711,138.724,58.105)
C5: (62.431,139.661,57.192)
O3': (60.553,134.869,60.479)
OP1: (63.528,132.864,56.563)
OP2: (63.553,135.062,55.249)
C4: (61.797,140.853,57.650)
O5': (63.196,135.056,57.722)
C3': (61.386,135.904,59.971)
C1': (62.627,137.861,60.439)
O4': (63.497,136.860,59.923)
C5': (63.408,134.579,59.061)
P: (63.863,134.303,56.487)
O2: (61.593,140.278,61.034)
C4': (62.860,135.555,60.075)
C2': (61.326,137.154,60.835)
O2': (61.409,136.823,62.198)
N1: (62.397,138.912,59.422)
N3: (61.520,141.051,58.931)
N4: (61.454,141.818,56.788)
C6: (62.711,138.724,58.105)
C5: (62.431,139.661,57.192)
O3': (60.553,134.869,60.479)
OP1: (68.988,135.857,52.125)
OP2: (69.104,138.323,52.765)
C3': (66.092,135.650,56.750)
C1': (67.288,137.299,57.918)
C5': (67.900,135.399,54.903)
O4': (68.095,136.819,56.851)
C8: (66.731,139.169,56.284)
O2': (66.671,135.295,59.084)
C6: (65.044,141.615,58.153)
C5: (65.721,140.549,57.544)
C4: (66.078,139.486,58.350)
P: (69.155,136.896,53.155)
C4': (67.560,135.552,56.365)
C2': (66.201,136.248,58.144)
C2: (65.177,140.419,60.127)
N1: (64.773,141.516,59.473)
N3: (65.833,139.358,59.666)
N6: (64.667,142.719,57.505)
N7: (66.137,140.336,56.241)
N9: (66.729,138.595,57.529)
O5': (68.077,136.679,54.304)
O3': (65.442,134.387,56.777)
OP2: (69.104,138.323,52.765)
C3': (66.092,135.650,56.750)
C1': (67.288,137.299,57.918)
C5': (67.900,135.399,54.903)
O4': (68.095,136.819,56.851)
C8: (66.731,139.169,56.284)
O2': (66.671,135.295,59.084)
C6: (65.044,141.615,58.153)
C5: (65.721,140.549,57.544)
C4: (66.078,139.486,58.350)
P: (69.155,136.896,53.155)
C4': (67.560,135.552,56.365)
C2': (66.201,136.248,58.144)
C2: (65.177,140.419,60.127)
N1: (64.773,141.516,59.473)
N3: (65.833,139.358,59.666)
N6: (64.667,142.719,57.505)
N7: (66.137,140.336,56.241)
N9: (66.729,138.595,57.529)
O5': (68.077,136.679,54.304)
O3': (65.442,134.387,56.777)
Image (generated by PyMOL):