Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01221:01220
Extra
PDB:
ATOM 1 O3' A A1220 18.874 92.158 98.846 1.00 42.39 O
ATOM 2 P C A1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 3 OP1 C A1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 4 OP2 C A1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 5 O5' C A1221 16.620 91.150 98.454 1.00 41.65 O
ATOM 6 C5' C A1221 16.725 89.957 99.260 1.00 41.87 C
ATOM 7 C4' C A1221 15.626 89.925 100.290 1.00 42.32 C
ATOM 8 O4' C A1221 15.821 90.996 101.245 1.00 41.80 O
ATOM 9 C3' C A1221 14.231 90.181 99.754 1.00 42.58 C
ATOM 10 O3' C A1221 13.671 89.034 99.153 1.00 43.89 O
ATOM 11 C2' C A1221 13.497 90.635 100.999 1.00 42.60 C
ATOM 12 O2' C A1221 13.233 89.569 101.882 1.00 40.72 O
ATOM 13 C1' C A1221 14.564 91.515 101.638 1.00 43.01 C
ATOM 14 N1 C A1221 14.485 92.924 101.210 1.00 44.79 N
ATOM 15 C2 C A1221 13.446 93.720 101.708 1.00 45.77 C
ATOM 16 O2 C A1221 12.566 93.194 102.403 1.00 46.58 O
ATOM 17 N3 C A1221 13.419 95.036 101.409 1.00 46.37 N
ATOM 18 C4 C A1221 14.360 95.563 100.625 1.00 47.30 C
ATOM 19 N4 C A1221 14.314 96.882 100.398 1.00 46.79 N
ATOM 20 C5 C A1221 15.395 94.765 100.051 1.00 47.00 C
ATOM 21 C6 C A1221 15.420 93.463 100.369 1.00 46.34 C
ATOM 22 P C A1222 12.888 89.185 97.761 1.00 46.64 P
ATOM 23 OP1 C A1222 12.930 87.867 97.065 1.00 44.97 O
ATOM 24 OP2 C A1222 13.369 90.392 97.055 1.00 45.61 O
ATOM 25 O5' C A1222 11.412 89.545 98.224 1.00 47.65 O
TER
ATOM 1 O3' G B1219 18.548 98.495 97.619 1.00 42.60 O
ATOM 2 P A B1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 3 OP1 A B1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 4 OP2 A B1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 5 O5' A B1220 18.267 96.145 98.476 1.00 41.86 O
ATOM 6 C5' A B1220 19.368 95.360 97.991 1.00 42.73 C
ATOM 7 C4' A B1220 19.787 94.368 99.047 1.00 43.91 C
ATOM 8 O4' A B1220 20.229 95.088 100.227 1.00 44.15 O
ATOM 9 C3' A B1220 18.684 93.419 99.495 1.00 41.80 C
ATOM 10 O3' A B1220 18.874 92.158 98.846 1.00 42.39 O
ATOM 11 C2' A B1220 18.907 93.302 101.000 1.00 41.14 C
ATOM 12 O2' A B1220 19.918 92.362 101.290 1.00 37.97 O
ATOM 13 C1' A B1220 19.472 94.684 101.340 1.00 41.94 C
ATOM 14 N9 A B1220 18.574 95.791 101.687 1.00 41.31 N
ATOM 15 C8 A B1220 18.752 97.088 101.281 1.00 40.10 C
ATOM 16 N7 A B1220 17.887 97.923 101.789 1.00 42.09 N
ATOM 17 C5 A B1220 17.064 97.123 102.564 1.00 40.26 C
ATOM 18 C6 A B1220 15.960 97.422 103.374 1.00 40.45 C
ATOM 19 N6 A B1220 15.468 98.652 103.532 1.00 40.00 N
ATOM 20 N1 A B1220 15.371 96.405 104.026 1.00 40.17 N
ATOM 21 C2 A B1220 15.864 95.174 103.861 1.00 40.27 C
ATOM 22 N3 A B1220 16.895 94.767 103.124 1.00 40.43 N
ATOM 23 C4 A B1220 17.462 95.803 102.495 1.00 39.81 C
ATOM 24 P C B1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 25 OP1 C B1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 26 OP2 C B1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 27 O5' C B1221 16.620 91.150 98.454 1.00 41.65 O
TER
ATOM 2 P C A1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 3 OP1 C A1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 4 OP2 C A1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 5 O5' C A1221 16.620 91.150 98.454 1.00 41.65 O
ATOM 6 C5' C A1221 16.725 89.957 99.260 1.00 41.87 C
ATOM 7 C4' C A1221 15.626 89.925 100.290 1.00 42.32 C
ATOM 8 O4' C A1221 15.821 90.996 101.245 1.00 41.80 O
ATOM 9 C3' C A1221 14.231 90.181 99.754 1.00 42.58 C
ATOM 10 O3' C A1221 13.671 89.034 99.153 1.00 43.89 O
ATOM 11 C2' C A1221 13.497 90.635 100.999 1.00 42.60 C
ATOM 12 O2' C A1221 13.233 89.569 101.882 1.00 40.72 O
ATOM 13 C1' C A1221 14.564 91.515 101.638 1.00 43.01 C
ATOM 14 N1 C A1221 14.485 92.924 101.210 1.00 44.79 N
ATOM 15 C2 C A1221 13.446 93.720 101.708 1.00 45.77 C
ATOM 16 O2 C A1221 12.566 93.194 102.403 1.00 46.58 O
ATOM 17 N3 C A1221 13.419 95.036 101.409 1.00 46.37 N
ATOM 18 C4 C A1221 14.360 95.563 100.625 1.00 47.30 C
ATOM 19 N4 C A1221 14.314 96.882 100.398 1.00 46.79 N
ATOM 20 C5 C A1221 15.395 94.765 100.051 1.00 47.00 C
ATOM 21 C6 C A1221 15.420 93.463 100.369 1.00 46.34 C
ATOM 22 P C A1222 12.888 89.185 97.761 1.00 46.64 P
ATOM 23 OP1 C A1222 12.930 87.867 97.065 1.00 44.97 O
ATOM 24 OP2 C A1222 13.369 90.392 97.055 1.00 45.61 O
ATOM 25 O5' C A1222 11.412 89.545 98.224 1.00 47.65 O
TER
ATOM 1 O3' G B1219 18.548 98.495 97.619 1.00 42.60 O
ATOM 2 P A B1220 17.566 97.231 97.551 1.00 42.72 P
ATOM 3 OP1 A B1220 17.542 96.690 96.155 1.00 40.58 O
ATOM 4 OP2 A B1220 16.299 97.657 98.202 1.00 39.14 O
ATOM 5 O5' A B1220 18.267 96.145 98.476 1.00 41.86 O
ATOM 6 C5' A B1220 19.368 95.360 97.991 1.00 42.73 C
ATOM 7 C4' A B1220 19.787 94.368 99.047 1.00 43.91 C
ATOM 8 O4' A B1220 20.229 95.088 100.227 1.00 44.15 O
ATOM 9 C3' A B1220 18.684 93.419 99.495 1.00 41.80 C
ATOM 10 O3' A B1220 18.874 92.158 98.846 1.00 42.39 O
ATOM 11 C2' A B1220 18.907 93.302 101.000 1.00 41.14 C
ATOM 12 O2' A B1220 19.918 92.362 101.290 1.00 37.97 O
ATOM 13 C1' A B1220 19.472 94.684 101.340 1.00 41.94 C
ATOM 14 N9 A B1220 18.574 95.791 101.687 1.00 41.31 N
ATOM 15 C8 A B1220 18.752 97.088 101.281 1.00 40.10 C
ATOM 16 N7 A B1220 17.887 97.923 101.789 1.00 42.09 N
ATOM 17 C5 A B1220 17.064 97.123 102.564 1.00 40.26 C
ATOM 18 C6 A B1220 15.960 97.422 103.374 1.00 40.45 C
ATOM 19 N6 A B1220 15.468 98.652 103.532 1.00 40.00 N
ATOM 20 N1 A B1220 15.371 96.405 104.026 1.00 40.17 N
ATOM 21 C2 A B1220 15.864 95.174 103.861 1.00 40.27 C
ATOM 22 N3 A B1220 16.895 94.767 103.124 1.00 40.43 N
ATOM 23 C4 A B1220 17.462 95.803 102.495 1.00 39.81 C
ATOM 24 P C B1221 17.886 91.703 97.664 1.00 42.87 P
ATOM 25 OP1 C B1221 18.518 90.562 96.948 1.00 42.02 O
ATOM 26 OP2 C B1221 17.504 92.917 96.899 1.00 44.02 O
ATOM 27 O5' C B1221 16.620 91.150 98.454 1.00 41.65 O
TER
Atoms:
C2: (13.446,93.720,101.708)
OP1: (18.518,90.562,96.948)
OP2: (17.504,92.917,96.899)
C4: (14.360,95.563,100.625)
O5': (16.620,91.150,98.454)
C3': (14.231,90.181,99.754)
C1': (14.564,91.515,101.638)
O4': (15.821,90.996,101.245)
C5': (16.725,89.957,99.260)
P: (17.886,91.703,97.664)
O2: (12.566,93.194,102.403)
C4': (15.626,89.925,100.290)
C2': (13.497,90.635,100.999)
O2': (13.233,89.569,101.882)
N1: (14.485,92.924,101.210)
N3: (13.419,95.036,101.409)
N4: (14.314,96.882,100.398)
C6: (15.420,93.463,100.369)
C5: (15.395,94.765,100.051)
O3': (13.671,89.034,99.153)
OP1: (18.518,90.562,96.948)
OP2: (17.504,92.917,96.899)
C4: (14.360,95.563,100.625)
O5': (16.620,91.150,98.454)
C3': (14.231,90.181,99.754)
C1': (14.564,91.515,101.638)
O4': (15.821,90.996,101.245)
C5': (16.725,89.957,99.260)
P: (17.886,91.703,97.664)
O2: (12.566,93.194,102.403)
C4': (15.626,89.925,100.290)
C2': (13.497,90.635,100.999)
O2': (13.233,89.569,101.882)
N1: (14.485,92.924,101.210)
N3: (13.419,95.036,101.409)
N4: (14.314,96.882,100.398)
C6: (15.420,93.463,100.369)
C5: (15.395,94.765,100.051)
O3': (13.671,89.034,99.153)
OP1: (17.542,96.690,96.155)
OP2: (16.299,97.657,98.202)
C3': (18.684,93.419,99.495)
C1': (19.472,94.684,101.340)
C5': (19.368,95.360,97.991)
O4': (20.229,95.088,100.227)
C8: (18.752,97.088,101.281)
O2': (19.918,92.362,101.290)
C6: (15.960,97.422,103.374)
C5: (17.064,97.123,102.564)
C4: (17.462,95.803,102.495)
P: (17.566,97.231,97.551)
C4': (19.787,94.368,99.047)
C2': (18.907,93.302,101.000)
C2: (15.864,95.174,103.861)
N1: (15.371,96.405,104.026)
N3: (16.895,94.767,103.124)
N6: (15.468,98.652,103.532)
N7: (17.887,97.923,101.789)
N9: (18.574,95.791,101.687)
O5': (18.267,96.145,98.476)
O3': (18.874,92.158,98.846)
OP2: (16.299,97.657,98.202)
C3': (18.684,93.419,99.495)
C1': (19.472,94.684,101.340)
C5': (19.368,95.360,97.991)
O4': (20.229,95.088,100.227)
C8: (18.752,97.088,101.281)
O2': (19.918,92.362,101.290)
C6: (15.960,97.422,103.374)
C5: (17.064,97.123,102.564)
C4: (17.462,95.803,102.495)
P: (17.566,97.231,97.551)
C4': (19.787,94.368,99.047)
C2': (18.907,93.302,101.000)
C2: (15.864,95.174,103.861)
N1: (15.371,96.405,104.026)
N3: (16.895,94.767,103.124)
N6: (15.468,98.652,103.532)
N7: (17.887,97.923,101.789)
N9: (18.574,95.791,101.687)
O5': (18.267,96.145,98.476)
O3': (18.874,92.158,98.846)
Image (generated by PyMOL):