Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0132:0118
Extra
PDB:
ATOM 1 O3' C A 131 79.447 143.505 11.616 1.00 45.11 O
ATOM 2 P A A 132 78.367 143.247 12.775 1.00 48.93 P
ATOM 3 OP1 A A 132 77.010 143.222 12.153 1.00 46.91 O
ATOM 4 OP2 A A 132 78.634 144.169 13.919 1.00 45.32 O
ATOM 5 O5' A A 132 78.708 141.761 13.225 1.00 47.54 O
ATOM 6 C5' A A 132 78.521 141.337 14.573 1.00 45.64 C
ATOM 7 C4' A A 132 79.027 139.934 14.735 1.00 44.04 C
ATOM 8 O4' A A 132 80.456 139.906 14.481 1.00 43.68 O
ATOM 9 C3' A A 132 78.894 139.371 16.133 1.00 43.32 C
ATOM 10 O3' A A 132 77.580 138.892 16.374 1.00 41.60 O
ATOM 11 C2' A A 132 79.956 138.287 16.133 1.00 41.99 C
ATOM 12 O2' A A 132 79.528 137.158 15.404 1.00 41.76 O
ATOM 13 C1' A A 132 81.079 138.989 15.365 1.00 42.05 C
ATOM 14 N9 A A 132 81.989 139.755 16.220 1.00 41.52 N
ATOM 15 C8 A A 132 82.125 141.120 16.274 1.00 40.57 C
ATOM 16 N7 A A 132 83.055 141.528 17.101 1.00 40.22 N
ATOM 17 C5 A A 132 83.562 140.355 17.637 1.00 40.47 C
ATOM 18 C6 A A 132 84.590 140.104 18.569 1.00 40.80 C
ATOM 19 N6 A A 132 85.330 141.062 19.138 1.00 37.18 N
ATOM 20 N1 A A 132 84.839 138.815 18.892 1.00 41.08 N
ATOM 21 C2 A A 132 84.108 137.855 18.312 1.00 39.97 C
ATOM 22 N3 A A 132 83.127 137.964 17.419 1.00 40.32 N
ATOM 23 C4 A A 132 82.902 139.254 17.118 1.00 41.05 C
ATOM 24 P A A 133 76.917 139.109 17.819 1.00 43.90 P
ATOM 25 OP1 A A 133 75.470 138.835 17.688 1.00 41.90 O
ATOM 26 OP2 A A 133 77.372 140.412 18.380 1.00 43.22 O
ATOM 27 O5' A A 133 77.575 137.961 18.701 1.00 42.01 O
TER
ATOM 1 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 2 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C B 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C B 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C B 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C B 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C B 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C B 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C B 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C B 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C B 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C B 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C B 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C B 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C B 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C B 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C B 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
TER
ATOM 2 P A A 132 78.367 143.247 12.775 1.00 48.93 P
ATOM 3 OP1 A A 132 77.010 143.222 12.153 1.00 46.91 O
ATOM 4 OP2 A A 132 78.634 144.169 13.919 1.00 45.32 O
ATOM 5 O5' A A 132 78.708 141.761 13.225 1.00 47.54 O
ATOM 6 C5' A A 132 78.521 141.337 14.573 1.00 45.64 C
ATOM 7 C4' A A 132 79.027 139.934 14.735 1.00 44.04 C
ATOM 8 O4' A A 132 80.456 139.906 14.481 1.00 43.68 O
ATOM 9 C3' A A 132 78.894 139.371 16.133 1.00 43.32 C
ATOM 10 O3' A A 132 77.580 138.892 16.374 1.00 41.60 O
ATOM 11 C2' A A 132 79.956 138.287 16.133 1.00 41.99 C
ATOM 12 O2' A A 132 79.528 137.158 15.404 1.00 41.76 O
ATOM 13 C1' A A 132 81.079 138.989 15.365 1.00 42.05 C
ATOM 14 N9 A A 132 81.989 139.755 16.220 1.00 41.52 N
ATOM 15 C8 A A 132 82.125 141.120 16.274 1.00 40.57 C
ATOM 16 N7 A A 132 83.055 141.528 17.101 1.00 40.22 N
ATOM 17 C5 A A 132 83.562 140.355 17.637 1.00 40.47 C
ATOM 18 C6 A A 132 84.590 140.104 18.569 1.00 40.80 C
ATOM 19 N6 A A 132 85.330 141.062 19.138 1.00 37.18 N
ATOM 20 N1 A A 132 84.839 138.815 18.892 1.00 41.08 N
ATOM 21 C2 A A 132 84.108 137.855 18.312 1.00 39.97 C
ATOM 22 N3 A A 132 83.127 137.964 17.419 1.00 40.32 N
ATOM 23 C4 A A 132 82.902 139.254 17.118 1.00 41.05 C
ATOM 24 P A A 133 76.917 139.109 17.819 1.00 43.90 P
ATOM 25 OP1 A A 133 75.470 138.835 17.688 1.00 41.90 O
ATOM 26 OP2 A A 133 77.372 140.412 18.380 1.00 43.22 O
ATOM 27 O5' A A 133 77.575 137.961 18.701 1.00 42.01 O
TER
ATOM 1 O3' A B 117 84.273 151.972 22.297 1.00 62.12 O
ATOM 2 P C B 118 85.101 150.648 21.905 1.00 62.05 P
ATOM 3 OP1 C B 118 86.353 150.573 22.705 1.00 63.44 O
ATOM 4 OP2 C B 118 85.189 150.611 20.426 1.00 62.06 O
ATOM 5 O5' C B 118 84.132 149.456 22.326 1.00 61.56 O
ATOM 6 C5' C B 118 83.398 149.486 23.566 1.00 57.35 C
ATOM 7 C4' C B 118 83.076 148.082 24.012 1.00 54.15 C
ATOM 8 O4' C B 118 82.192 147.444 23.053 1.00 55.05 O
ATOM 9 C3' C B 118 84.265 147.144 24.079 1.00 52.59 C
ATOM 10 O3' C B 118 84.991 147.333 25.284 1.00 50.03 O
ATOM 11 C2' C B 118 83.594 145.778 24.005 1.00 52.90 C
ATOM 12 O2' C B 118 82.981 145.392 25.215 1.00 53.89 O
ATOM 13 C1' C B 118 82.477 146.052 22.999 1.00 54.78 C
ATOM 14 N1 C B 118 82.838 145.670 21.617 1.00 56.64 N
ATOM 15 C2 C B 118 83.034 144.306 21.325 1.00 57.66 C
ATOM 16 O2 C B 118 82.886 143.468 22.229 1.00 57.53 O
ATOM 17 N3 C B 118 83.381 143.941 20.066 1.00 57.99 N
ATOM 18 C4 C B 118 83.529 144.869 19.117 1.00 57.07 C
ATOM 19 N4 C B 118 83.880 144.462 17.893 1.00 55.98 N
ATOM 20 C5 C B 118 83.326 146.257 19.383 1.00 56.88 C
ATOM 21 C6 C B 118 82.986 146.610 20.632 1.00 56.08 C
ATOM 22 P A B 119 86.560 147.653 25.226 1.00 47.28 P
ATOM 23 OP1 A B 119 86.686 149.106 25.029 1.00 47.43 O
ATOM 24 OP2 A B 119 87.211 146.727 24.269 1.00 47.72 O
ATOM 25 O5' A B 119 87.078 147.287 26.686 1.00 45.01 O
TER
Atoms:
OP1: (77.010,143.222,12.153)
OP2: (78.634,144.169,13.919)
C3': (78.894,139.371,16.133)
C1': (81.079,138.989,15.365)
C5': (78.521,141.337,14.573)
O4': (80.456,139.906,14.481)
C8: (82.125,141.120,16.274)
O2': (79.528,137.158,15.404)
C6: (84.590,140.104,18.569)
C5: (83.562,140.355,17.637)
C4: (82.902,139.254,17.118)
P: (78.367,143.247,12.775)
C4': (79.027,139.934,14.735)
C2': (79.956,138.287,16.133)
C2: (84.108,137.855,18.312)
N1: (84.839,138.815,18.892)
N3: (83.127,137.964,17.419)
N6: (85.330,141.062,19.138)
N7: (83.055,141.528,17.101)
N9: (81.989,139.755,16.220)
O5': (78.708,141.761,13.225)
O3': (77.580,138.892,16.374)
OP2: (78.634,144.169,13.919)
C3': (78.894,139.371,16.133)
C1': (81.079,138.989,15.365)
C5': (78.521,141.337,14.573)
O4': (80.456,139.906,14.481)
C8: (82.125,141.120,16.274)
O2': (79.528,137.158,15.404)
C6: (84.590,140.104,18.569)
C5: (83.562,140.355,17.637)
C4: (82.902,139.254,17.118)
P: (78.367,143.247,12.775)
C4': (79.027,139.934,14.735)
C2': (79.956,138.287,16.133)
C2: (84.108,137.855,18.312)
N1: (84.839,138.815,18.892)
N3: (83.127,137.964,17.419)
N6: (85.330,141.062,19.138)
N7: (83.055,141.528,17.101)
N9: (81.989,139.755,16.220)
O5': (78.708,141.761,13.225)
O3': (77.580,138.892,16.374)
C2: (83.034,144.306,21.325)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
OP1: (86.353,150.573,22.705)
OP2: (85.189,150.611,20.426)
C4: (83.529,144.869,19.117)
O5': (84.132,149.456,22.326)
C3': (84.265,147.144,24.079)
C1': (82.477,146.052,22.999)
O4': (82.192,147.444,23.053)
C5': (83.398,149.486,23.566)
P: (85.101,150.648,21.905)
O2: (82.886,143.468,22.229)
C4': (83.076,148.082,24.012)
C2': (83.594,145.778,24.005)
O2': (82.981,145.392,25.215)
N1: (82.838,145.670,21.617)
N3: (83.381,143.941,20.066)
N4: (83.880,144.462,17.893)
C6: (82.986,146.610,20.632)
C5: (83.326,146.257,19.383)
O3': (84.991,147.333,25.284)
Image (generated by PyMOL):