Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0478:0477
Extra
PDB:
ATOM 1 O3' A A 477 21.928 173.824 57.218 1.00 59.89 O
ATOM 2 P C A 478 22.397 174.734 58.463 1.00 61.32 P
ATOM 3 OP1 C A 478 22.971 175.977 57.894 1.00 62.58 O
ATOM 4 OP2 C A 478 23.219 173.915 59.390 1.00 62.11 O
ATOM 5 O5' C A 478 21.031 175.093 59.204 1.00 60.45 O
ATOM 6 C5' C A 478 20.098 176.030 58.636 1.00 59.05 C
ATOM 7 C4' C A 478 18.904 176.195 59.549 1.00 59.27 C
ATOM 8 O4' C A 478 18.168 174.945 59.610 1.00 59.68 O
ATOM 9 C3' C A 478 19.244 176.495 60.999 1.00 59.58 C
ATOM 10 O3' C A 478 19.490 177.876 61.228 1.00 58.34 O
ATOM 11 C2' C A 478 18.013 175.995 61.740 1.00 59.94 C
ATOM 12 O2' C A 478 16.938 176.906 61.714 1.00 60.69 O
ATOM 13 C1' C A 478 17.660 174.753 60.922 1.00 59.77 C
ATOM 14 N1 C A 478 18.246 173.518 61.476 1.00 59.78 N
ATOM 15 C2 C A 478 17.504 172.778 62.407 1.00 59.54 C
ATOM 16 O2 C A 478 16.383 173.188 62.751 1.00 60.51 O
ATOM 17 N3 C A 478 18.024 171.635 62.904 1.00 61.18 N
ATOM 18 C4 C A 478 19.228 171.218 62.505 1.00 60.81 C
ATOM 19 N4 C A 478 19.684 170.064 63.001 1.00 60.38 N
ATOM 20 C5 C A 478 20.012 171.960 61.574 1.00 59.76 C
ATOM 21 C6 C A 478 19.489 173.092 61.091 1.00 59.54 C
ATOM 22 P C A 479 20.447 178.318 62.441 1.00 58.22 P
ATOM 23 OP1 C A 479 20.573 179.797 62.387 1.00 58.93 O
ATOM 24 OP2 C A 479 21.674 177.470 62.410 1.00 57.38 O
ATOM 25 O5' C A 479 19.619 177.929 63.742 1.00 55.61 O
TER
ATOM 1 O3' U B 476 22.686 167.981 58.088 1.00 56.57 O
ATOM 2 P A B 477 23.833 169.079 58.380 1.00 58.81 P
ATOM 3 OP1 A B 477 24.921 168.864 57.386 1.00 59.47 O
ATOM 4 OP2 A B 477 24.156 169.104 59.830 1.00 58.59 O
ATOM 5 O5' A B 477 23.114 170.452 58.009 1.00 60.22 O
ATOM 6 C5' A B 477 22.925 170.837 56.632 1.00 58.36 C
ATOM 7 C4' A B 477 21.596 171.536 56.444 1.00 57.47 C
ATOM 8 O4' A B 477 20.499 170.592 56.544 1.00 56.44 O
ATOM 9 C3' A B 477 21.226 172.607 57.453 1.00 57.15 C
ATOM 10 O3' A B 477 21.928 173.824 57.218 1.00 59.89 O
ATOM 11 C2' A B 477 19.726 172.744 57.214 1.00 56.79 C
ATOM 12 O2' A B 477 19.410 173.523 56.071 1.00 57.02 O
ATOM 13 C1' A B 477 19.325 171.286 56.953 1.00 56.30 C
ATOM 14 N9 A B 477 18.765 170.630 58.138 1.00 56.48 N
ATOM 15 C8 A B 477 19.323 169.651 58.927 1.00 55.10 C
ATOM 16 N7 A B 477 18.572 169.297 59.941 1.00 54.40 N
ATOM 17 C5 A B 477 17.439 170.085 59.809 1.00 55.13 C
ATOM 18 C6 A B 477 16.266 170.193 60.577 1.00 55.61 C
ATOM 19 N6 A B 477 16.023 169.465 61.667 1.00 56.13 N
ATOM 20 N1 A B 477 15.335 171.088 60.182 1.00 56.71 N
ATOM 21 C2 A B 477 15.574 171.816 59.081 1.00 57.59 C
ATOM 22 N3 A B 477 16.633 171.803 58.274 1.00 57.13 N
ATOM 23 C4 A B 477 17.541 170.907 58.700 1.00 56.31 C
ATOM 24 P C B 478 22.397 174.734 58.463 1.00 61.32 P
ATOM 25 OP1 C B 478 22.971 175.977 57.894 1.00 62.58 O
ATOM 26 OP2 C B 478 23.219 173.915 59.390 1.00 62.11 O
ATOM 27 O5' C B 478 21.031 175.093 59.204 1.00 60.45 O
TER
ATOM 2 P C A 478 22.397 174.734 58.463 1.00 61.32 P
ATOM 3 OP1 C A 478 22.971 175.977 57.894 1.00 62.58 O
ATOM 4 OP2 C A 478 23.219 173.915 59.390 1.00 62.11 O
ATOM 5 O5' C A 478 21.031 175.093 59.204 1.00 60.45 O
ATOM 6 C5' C A 478 20.098 176.030 58.636 1.00 59.05 C
ATOM 7 C4' C A 478 18.904 176.195 59.549 1.00 59.27 C
ATOM 8 O4' C A 478 18.168 174.945 59.610 1.00 59.68 O
ATOM 9 C3' C A 478 19.244 176.495 60.999 1.00 59.58 C
ATOM 10 O3' C A 478 19.490 177.876 61.228 1.00 58.34 O
ATOM 11 C2' C A 478 18.013 175.995 61.740 1.00 59.94 C
ATOM 12 O2' C A 478 16.938 176.906 61.714 1.00 60.69 O
ATOM 13 C1' C A 478 17.660 174.753 60.922 1.00 59.77 C
ATOM 14 N1 C A 478 18.246 173.518 61.476 1.00 59.78 N
ATOM 15 C2 C A 478 17.504 172.778 62.407 1.00 59.54 C
ATOM 16 O2 C A 478 16.383 173.188 62.751 1.00 60.51 O
ATOM 17 N3 C A 478 18.024 171.635 62.904 1.00 61.18 N
ATOM 18 C4 C A 478 19.228 171.218 62.505 1.00 60.81 C
ATOM 19 N4 C A 478 19.684 170.064 63.001 1.00 60.38 N
ATOM 20 C5 C A 478 20.012 171.960 61.574 1.00 59.76 C
ATOM 21 C6 C A 478 19.489 173.092 61.091 1.00 59.54 C
ATOM 22 P C A 479 20.447 178.318 62.441 1.00 58.22 P
ATOM 23 OP1 C A 479 20.573 179.797 62.387 1.00 58.93 O
ATOM 24 OP2 C A 479 21.674 177.470 62.410 1.00 57.38 O
ATOM 25 O5' C A 479 19.619 177.929 63.742 1.00 55.61 O
TER
ATOM 1 O3' U B 476 22.686 167.981 58.088 1.00 56.57 O
ATOM 2 P A B 477 23.833 169.079 58.380 1.00 58.81 P
ATOM 3 OP1 A B 477 24.921 168.864 57.386 1.00 59.47 O
ATOM 4 OP2 A B 477 24.156 169.104 59.830 1.00 58.59 O
ATOM 5 O5' A B 477 23.114 170.452 58.009 1.00 60.22 O
ATOM 6 C5' A B 477 22.925 170.837 56.632 1.00 58.36 C
ATOM 7 C4' A B 477 21.596 171.536 56.444 1.00 57.47 C
ATOM 8 O4' A B 477 20.499 170.592 56.544 1.00 56.44 O
ATOM 9 C3' A B 477 21.226 172.607 57.453 1.00 57.15 C
ATOM 10 O3' A B 477 21.928 173.824 57.218 1.00 59.89 O
ATOM 11 C2' A B 477 19.726 172.744 57.214 1.00 56.79 C
ATOM 12 O2' A B 477 19.410 173.523 56.071 1.00 57.02 O
ATOM 13 C1' A B 477 19.325 171.286 56.953 1.00 56.30 C
ATOM 14 N9 A B 477 18.765 170.630 58.138 1.00 56.48 N
ATOM 15 C8 A B 477 19.323 169.651 58.927 1.00 55.10 C
ATOM 16 N7 A B 477 18.572 169.297 59.941 1.00 54.40 N
ATOM 17 C5 A B 477 17.439 170.085 59.809 1.00 55.13 C
ATOM 18 C6 A B 477 16.266 170.193 60.577 1.00 55.61 C
ATOM 19 N6 A B 477 16.023 169.465 61.667 1.00 56.13 N
ATOM 20 N1 A B 477 15.335 171.088 60.182 1.00 56.71 N
ATOM 21 C2 A B 477 15.574 171.816 59.081 1.00 57.59 C
ATOM 22 N3 A B 477 16.633 171.803 58.274 1.00 57.13 N
ATOM 23 C4 A B 477 17.541 170.907 58.700 1.00 56.31 C
ATOM 24 P C B 478 22.397 174.734 58.463 1.00 61.32 P
ATOM 25 OP1 C B 478 22.971 175.977 57.894 1.00 62.58 O
ATOM 26 OP2 C B 478 23.219 173.915 59.390 1.00 62.11 O
ATOM 27 O5' C B 478 21.031 175.093 59.204 1.00 60.45 O
TER
Atoms:
C2: (17.504,172.778,62.407)
OP1: (22.971,175.977,57.894)
OP2: (23.219,173.915,59.390)
C4: (19.228,171.218,62.505)
O5': (21.031,175.093,59.204)
C3': (19.244,176.495,60.999)
C1': (17.660,174.753,60.922)
O4': (18.168,174.945,59.610)
C5': (20.098,176.030,58.636)
P: (22.397,174.734,58.463)
O2: (16.383,173.188,62.751)
C4': (18.904,176.195,59.549)
C2': (18.013,175.995,61.740)
O2': (16.938,176.906,61.714)
N1: (18.246,173.518,61.476)
N3: (18.024,171.635,62.904)
N4: (19.684,170.064,63.001)
C6: (19.489,173.092,61.091)
C5: (20.012,171.960,61.574)
O3': (19.490,177.876,61.228)
OP1: (22.971,175.977,57.894)
OP2: (23.219,173.915,59.390)
C4: (19.228,171.218,62.505)
O5': (21.031,175.093,59.204)
C3': (19.244,176.495,60.999)
C1': (17.660,174.753,60.922)
O4': (18.168,174.945,59.610)
C5': (20.098,176.030,58.636)
P: (22.397,174.734,58.463)
O2: (16.383,173.188,62.751)
C4': (18.904,176.195,59.549)
C2': (18.013,175.995,61.740)
O2': (16.938,176.906,61.714)
N1: (18.246,173.518,61.476)
N3: (18.024,171.635,62.904)
N4: (19.684,170.064,63.001)
C6: (19.489,173.092,61.091)
C5: (20.012,171.960,61.574)
O3': (19.490,177.876,61.228)
OP1: (24.921,168.864,57.386)
OP2: (24.156,169.104,59.830)
C3': (21.226,172.607,57.453)
C1': (19.325,171.286,56.953)
C5': (22.925,170.837,56.632)
O4': (20.499,170.592,56.544)
C8: (19.323,169.651,58.927)
O2': (19.410,173.523,56.071)
C6: (16.266,170.193,60.577)
C5: (17.439,170.085,59.809)
C4: (17.541,170.907,58.700)
P: (23.833,169.079,58.380)
C4': (21.596,171.536,56.444)
C2': (19.726,172.744,57.214)
C2: (15.574,171.816,59.081)
N1: (15.335,171.088,60.182)
N3: (16.633,171.803,58.274)
N6: (16.023,169.465,61.667)
N7: (18.572,169.297,59.941)
N9: (18.765,170.630,58.138)
O5': (23.114,170.452,58.009)
O3': (21.928,173.824,57.218)
OP2: (24.156,169.104,59.830)
C3': (21.226,172.607,57.453)
C1': (19.325,171.286,56.953)
C5': (22.925,170.837,56.632)
O4': (20.499,170.592,56.544)
C8: (19.323,169.651,58.927)
O2': (19.410,173.523,56.071)
C6: (16.266,170.193,60.577)
C5: (17.439,170.085,59.809)
C4: (17.541,170.907,58.700)
P: (23.833,169.079,58.380)
C4': (21.596,171.536,56.444)
C2': (19.726,172.744,57.214)
C2: (15.574,171.816,59.081)
N1: (15.335,171.088,60.182)
N3: (16.633,171.803,58.274)
N6: (16.023,169.465,61.667)
N7: (18.572,169.297,59.941)
N9: (18.765,170.630,58.138)
O5': (23.114,170.452,58.009)
O3': (21.928,173.824,57.218)
Image (generated by PyMOL):