Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
377D:B4:B3
Extra
PDB:
ATOM 1 O3' A A 3 9.196 8.058 28.195 1.00 22.23 O
ATOM 2 P C A 4 9.272 9.669 28.227 1.00 23.79 P
ATOM 3 OP1 C A 4 10.611 10.028 27.722 1.00 28.31 O
ATOM 4 OP2 C A 4 8.820 10.179 29.553 1.00 22.74 O
ATOM 5 O5' C A 4 8.194 10.096 27.139 1.00 23.23 O
ATOM 6 C5' C A 4 8.276 9.605 25.806 1.00 20.26 C
ATOM 7 C4' C A 4 6.970 9.817 25.120 1.00 23.36 C
ATOM 8 O4' C A 4 5.982 8.963 25.740 1.00 23.95 O
ATOM 9 C3' C A 4 6.373 11.192 25.323 1.00 27.72 C
ATOM 10 O3' C A 4 6.942 12.174 24.479 1.00 33.13 O
ATOM 11 C2' C A 4 4.915 10.929 24.990 1.00 26.32 C
ATOM 12 O2' C A 4 4.669 10.780 23.612 1.00 26.91 O
ATOM 13 C1' C A 4 4.714 9.587 25.680 1.00 22.51 C
ATOM 14 N1 C A 4 4.238 9.808 27.043 1.00 21.19 N
ATOM 15 C2 C A 4 2.876 9.995 27.234 1.00 20.19 C
ATOM 16 O2 C A 4 2.132 9.952 26.249 1.00 20.61 O
ATOM 17 N3 C A 4 2.398 10.216 28.470 1.00 20.00 N
ATOM 18 C4 C A 4 3.237 10.270 29.502 1.00 18.31 C
ATOM 19 N4 C A 4 2.719 10.513 30.701 1.00 16.62 N
ATOM 20 C5 C A 4 4.643 10.078 29.346 1.00 19.28 C
ATOM 21 C6 C A 4 5.096 9.850 28.103 1.00 20.05 C
ATOM 22 P g A 5 6.932 13.709 24.943 1.00 36.51 P
ATOM 23 OP1 g A 5 7.778 14.443 23.971 1.00 38.49 O
ATOM 24 OP2 g A 5 7.278 13.731 26.393 1.00 36.75 O
ATOM 25 O5' g A 5 5.415 14.162 24.774 1.00 34.76 O
TER
ATOM 1 O3' U B 2 9.065 5.774 33.901 1.00 18.40 O
ATOM 2 P A B 3 9.091 7.262 33.307 1.00 18.74 P
ATOM 3 OP1 A B 3 10.496 7.746 33.321 1.00 19.75 O
ATOM 4 OP2 A B 3 8.034 8.052 34.001 1.00 17.71 O
ATOM 5 O5' A B 3 8.627 7.078 31.790 1.00 20.65 O
ATOM 6 C5' A B 3 9.419 6.307 30.863 1.00 16.59 C
ATOM 7 C4' A B 3 8.667 6.125 29.579 1.00 16.39 C
ATOM 8 O4' A B 3 7.435 5.439 29.885 1.00 17.42 O
ATOM 9 C3' A B 3 8.167 7.391 28.921 1.00 20.96 C
ATOM 10 O3' A B 3 9.196 8.058 28.195 1.00 22.23 O
ATOM 11 C2' A B 3 7.044 6.859 28.034 1.00 19.50 C
ATOM 12 O2' A B 3 7.515 6.212 26.858 1.00 22.06 O
ATOM 13 C1' A B 3 6.426 5.811 28.962 1.00 16.06 C
ATOM 14 N9 A B 3 5.272 6.299 29.720 1.00 15.34 N
ATOM 15 C8 A B 3 5.262 6.729 31.022 1.00 13.00 C
ATOM 16 N7 A B 3 4.084 7.132 31.438 1.00 15.53 N
ATOM 17 C5 A B 3 3.256 6.947 30.338 1.00 14.97 C
ATOM 18 C6 A B 3 1.885 7.186 30.135 1.00 15.64 C
ATOM 19 N6 A B 3 1.070 7.698 31.081 1.00 16.72 N
ATOM 20 N1 A B 3 1.368 6.892 28.914 1.00 15.09 N
ATOM 21 C2 A B 3 2.181 6.391 27.974 1.00 15.78 C
ATOM 22 N3 A B 3 3.485 6.126 28.043 1.00 12.85 N
ATOM 23 C4 A B 3 3.973 6.430 29.269 1.00 15.07 C
ATOM 24 P C B 4 9.272 9.669 28.227 1.00 23.79 P
ATOM 25 OP1 C B 4 10.611 10.028 27.722 1.00 28.31 O
ATOM 26 OP2 C B 4 8.820 10.179 29.553 1.00 22.74 O
ATOM 27 O5' C B 4 8.194 10.096 27.139 1.00 23.23 O
TER
ATOM 2 P C A 4 9.272 9.669 28.227 1.00 23.79 P
ATOM 3 OP1 C A 4 10.611 10.028 27.722 1.00 28.31 O
ATOM 4 OP2 C A 4 8.820 10.179 29.553 1.00 22.74 O
ATOM 5 O5' C A 4 8.194 10.096 27.139 1.00 23.23 O
ATOM 6 C5' C A 4 8.276 9.605 25.806 1.00 20.26 C
ATOM 7 C4' C A 4 6.970 9.817 25.120 1.00 23.36 C
ATOM 8 O4' C A 4 5.982 8.963 25.740 1.00 23.95 O
ATOM 9 C3' C A 4 6.373 11.192 25.323 1.00 27.72 C
ATOM 10 O3' C A 4 6.942 12.174 24.479 1.00 33.13 O
ATOM 11 C2' C A 4 4.915 10.929 24.990 1.00 26.32 C
ATOM 12 O2' C A 4 4.669 10.780 23.612 1.00 26.91 O
ATOM 13 C1' C A 4 4.714 9.587 25.680 1.00 22.51 C
ATOM 14 N1 C A 4 4.238 9.808 27.043 1.00 21.19 N
ATOM 15 C2 C A 4 2.876 9.995 27.234 1.00 20.19 C
ATOM 16 O2 C A 4 2.132 9.952 26.249 1.00 20.61 O
ATOM 17 N3 C A 4 2.398 10.216 28.470 1.00 20.00 N
ATOM 18 C4 C A 4 3.237 10.270 29.502 1.00 18.31 C
ATOM 19 N4 C A 4 2.719 10.513 30.701 1.00 16.62 N
ATOM 20 C5 C A 4 4.643 10.078 29.346 1.00 19.28 C
ATOM 21 C6 C A 4 5.096 9.850 28.103 1.00 20.05 C
ATOM 22 P g A 5 6.932 13.709 24.943 1.00 36.51 P
ATOM 23 OP1 g A 5 7.778 14.443 23.971 1.00 38.49 O
ATOM 24 OP2 g A 5 7.278 13.731 26.393 1.00 36.75 O
ATOM 25 O5' g A 5 5.415 14.162 24.774 1.00 34.76 O
TER
ATOM 1 O3' U B 2 9.065 5.774 33.901 1.00 18.40 O
ATOM 2 P A B 3 9.091 7.262 33.307 1.00 18.74 P
ATOM 3 OP1 A B 3 10.496 7.746 33.321 1.00 19.75 O
ATOM 4 OP2 A B 3 8.034 8.052 34.001 1.00 17.71 O
ATOM 5 O5' A B 3 8.627 7.078 31.790 1.00 20.65 O
ATOM 6 C5' A B 3 9.419 6.307 30.863 1.00 16.59 C
ATOM 7 C4' A B 3 8.667 6.125 29.579 1.00 16.39 C
ATOM 8 O4' A B 3 7.435 5.439 29.885 1.00 17.42 O
ATOM 9 C3' A B 3 8.167 7.391 28.921 1.00 20.96 C
ATOM 10 O3' A B 3 9.196 8.058 28.195 1.00 22.23 O
ATOM 11 C2' A B 3 7.044 6.859 28.034 1.00 19.50 C
ATOM 12 O2' A B 3 7.515 6.212 26.858 1.00 22.06 O
ATOM 13 C1' A B 3 6.426 5.811 28.962 1.00 16.06 C
ATOM 14 N9 A B 3 5.272 6.299 29.720 1.00 15.34 N
ATOM 15 C8 A B 3 5.262 6.729 31.022 1.00 13.00 C
ATOM 16 N7 A B 3 4.084 7.132 31.438 1.00 15.53 N
ATOM 17 C5 A B 3 3.256 6.947 30.338 1.00 14.97 C
ATOM 18 C6 A B 3 1.885 7.186 30.135 1.00 15.64 C
ATOM 19 N6 A B 3 1.070 7.698 31.081 1.00 16.72 N
ATOM 20 N1 A B 3 1.368 6.892 28.914 1.00 15.09 N
ATOM 21 C2 A B 3 2.181 6.391 27.974 1.00 15.78 C
ATOM 22 N3 A B 3 3.485 6.126 28.043 1.00 12.85 N
ATOM 23 C4 A B 3 3.973 6.430 29.269 1.00 15.07 C
ATOM 24 P C B 4 9.272 9.669 28.227 1.00 23.79 P
ATOM 25 OP1 C B 4 10.611 10.028 27.722 1.00 28.31 O
ATOM 26 OP2 C B 4 8.820 10.179 29.553 1.00 22.74 O
ATOM 27 O5' C B 4 8.194 10.096 27.139 1.00 23.23 O
TER
Atoms:
C2: (2.876,9.995,27.234)
OP1: (10.611,10.028,27.722)
OP2: (8.820,10.179,29.553)
C4: (3.237,10.270,29.502)
O5': (8.194,10.096,27.139)
C3': (6.373,11.192,25.323)
C1': (4.714,9.587,25.680)
O4': (5.982,8.963,25.740)
C5': (8.276,9.605,25.806)
P: (9.272,9.669,28.227)
O2: (2.132,9.952,26.249)
C4': (6.970,9.817,25.120)
C2': (4.915,10.929,24.990)
O2': (4.669,10.780,23.612)
N1: (4.238,9.808,27.043)
N3: (2.398,10.216,28.470)
N4: (2.719,10.513,30.701)
C6: (5.096,9.850,28.103)
C5: (4.643,10.078,29.346)
O3': (6.942,12.174,24.479)
OP1: (10.611,10.028,27.722)
OP2: (8.820,10.179,29.553)
C4: (3.237,10.270,29.502)
O5': (8.194,10.096,27.139)
C3': (6.373,11.192,25.323)
C1': (4.714,9.587,25.680)
O4': (5.982,8.963,25.740)
C5': (8.276,9.605,25.806)
P: (9.272,9.669,28.227)
O2: (2.132,9.952,26.249)
C4': (6.970,9.817,25.120)
C2': (4.915,10.929,24.990)
O2': (4.669,10.780,23.612)
N1: (4.238,9.808,27.043)
N3: (2.398,10.216,28.470)
N4: (2.719,10.513,30.701)
C6: (5.096,9.850,28.103)
C5: (4.643,10.078,29.346)
O3': (6.942,12.174,24.479)
OP1: (10.496,7.746,33.321)
OP2: (8.034,8.052,34.001)
C3': (8.167,7.391,28.921)
C1': (6.426,5.811,28.962)
C5': (9.419,6.307,30.863)
O4': (7.435,5.439,29.885)
C8: (5.262,6.729,31.022)
O2': (7.515,6.212,26.858)
C6: (1.885,7.186,30.135)
C5: (3.256,6.947,30.338)
C4: (3.973,6.430,29.269)
P: (9.091,7.262,33.307)
C4': (8.667,6.125,29.579)
C2': (7.044,6.859,28.034)
C2: (2.181,6.391,27.974)
N1: (1.368,6.892,28.914)
N3: (3.485,6.126,28.043)
N6: (1.070,7.698,31.081)
N7: (4.084,7.132,31.438)
N9: (5.272,6.299,29.720)
O5': (8.627,7.078,31.790)
O3': (9.196,8.058,28.195)
OP2: (8.034,8.052,34.001)
C3': (8.167,7.391,28.921)
C1': (6.426,5.811,28.962)
C5': (9.419,6.307,30.863)
O4': (7.435,5.439,29.885)
C8: (5.262,6.729,31.022)
O2': (7.515,6.212,26.858)
C6: (1.885,7.186,30.135)
C5: (3.256,6.947,30.338)
C4: (3.973,6.430,29.269)
P: (9.091,7.262,33.307)
C4': (8.667,6.125,29.579)
C2': (7.044,6.859,28.034)
C2: (2.181,6.391,27.974)
N1: (1.368,6.892,28.914)
N3: (3.485,6.126,28.043)
N6: (1.070,7.698,31.081)
N7: (4.084,7.132,31.438)
N9: (5.272,6.299,29.720)
O5': (8.627,7.078,31.790)
O3': (9.196,8.058,28.195)
Image (generated by PyMOL):