Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PJP:B18:B17
Extra
PDB:
ATOM 1 O3' A A 17 3.134 -0.236 6.245 1.00 37.94 O
ATOM 2 P C A 18 3.437 -1.022 4.911 1.00 38.86 P
ATOM 3 OP1 C A 18 2.863 -0.009 4.008 1.00 40.21 O
ATOM 4 OP2 C A 18 2.983 -2.445 4.849 1.00 36.34 O
ATOM 5 O5' C A 18 5.043 -1.088 4.808 1.00 35.52 O
ATOM 6 C5' C A 18 5.871 0.103 4.976 1.00 36.20 C
ATOM 7 C4' C A 18 7.282 -0.309 5.390 1.00 34.16 C
ATOM 8 O4' C A 18 7.253 -0.788 6.768 1.00 31.70 O
ATOM 9 C3' C A 18 7.912 -1.509 4.665 1.00 36.23 C
ATOM 10 O3' C A 18 8.380 -1.258 3.322 1.00 39.28 O
ATOM 11 C2' C A 18 9.047 -1.766 5.645 1.00 33.86 C
ATOM 12 O2' C A 18 9.931 -0.674 5.663 1.00 37.01 O
ATOM 13 C1' C A 18 8.259 -1.778 6.973 1.00 29.87 C
ATOM 14 N1 C A 18 7.627 -3.109 7.338 1.00 24.04 N
ATOM 15 C2 C A 18 8.448 -4.069 7.886 1.00 22.96 C
ATOM 16 O2 C A 18 9.637 -3.828 8.067 1.00 25.51 O
ATOM 17 N3 C A 18 7.924 -5.276 8.215 1.00 25.43 N
ATOM 18 C4 C A 18 6.624 -5.557 7.995 1.00 24.15 C
ATOM 19 N4 C A 18 6.246 -6.786 8.359 1.00 22.70 N
ATOM 20 C5 C A 18 5.731 -4.593 7.411 1.00 20.60 C
ATOM 21 C6 C A 18 6.283 -3.389 7.101 1.00 21.55 C
ATOM 22 P C A 19 8.306 -2.350 2.162 1.00 42.20 P
ATOM 23 OP1 C A 19 8.534 -1.585 0.919 1.00 46.83 O
ATOM 24 OP2 C A 19 7.050 -3.136 2.257 1.00 40.54 O
ATOM 25 O5' C A 19 9.537 -3.355 2.431 1.00 44.20 O
TER
ATOM 1 O3' C B 16 -1.460 -2.332 9.666 1.00 27.63 O
ATOM 2 P A B 17 -0.730 -2.809 8.279 1.00 26.53 P
ATOM 3 OP1 A B 17 -1.566 -2.442 7.147 1.00 31.60 O
ATOM 4 OP2 A B 17 -0.358 -4.198 8.397 1.00 28.79 O
ATOM 5 O5' A B 17 0.607 -1.947 8.314 1.00 28.48 O
ATOM 6 C5' A B 17 0.672 -0.516 8.213 1.00 34.00 C
ATOM 7 C4' A B 17 2.115 -0.080 8.386 1.00 33.49 C
ATOM 8 O4' A B 17 2.592 -0.451 9.690 1.00 37.06 O
ATOM 9 C3' A B 17 3.154 -0.792 7.526 1.00 35.84 C
ATOM 10 O3' A B 17 3.134 -0.236 6.245 1.00 37.94 O
ATOM 11 C2' A B 17 4.407 -0.309 8.216 1.00 33.91 C
ATOM 12 O2' A B 17 4.548 1.063 8.023 1.00 32.67 O
ATOM 13 C1' A B 17 4.025 -0.591 9.658 1.00 32.47 C
ATOM 14 N9 A B 17 4.379 -1.966 10.063 1.00 29.78 N
ATOM 15 C8 A B 17 3.540 -3.040 10.147 1.00 25.01 C
ATOM 16 N7 A B 17 4.121 -4.136 10.526 1.00 26.63 N
ATOM 17 C5 A B 17 5.449 -3.726 10.724 1.00 28.87 C
ATOM 18 C6 A B 17 6.618 -4.396 11.145 1.00 27.27 C
ATOM 19 N6 A B 17 6.643 -5.677 11.483 1.00 29.06 N
ATOM 20 N1 A B 17 7.775 -3.697 11.213 1.00 29.93 N
ATOM 21 C2 A B 17 7.810 -2.386 10.870 1.00 27.89 C
ATOM 22 N3 A B 17 6.767 -1.647 10.480 1.00 29.85 N
ATOM 23 C4 A B 17 5.622 -2.385 10.441 1.00 27.32 C
ATOM 24 P C B 18 3.437 -1.022 4.911 1.00 38.86 P
ATOM 25 OP1 C B 18 2.863 -0.009 4.008 1.00 40.21 O
ATOM 26 OP2 C B 18 2.983 -2.445 4.849 1.00 36.34 O
ATOM 27 O5' C B 18 5.043 -1.088 4.808 1.00 35.52 O
TER
ATOM 2 P C A 18 3.437 -1.022 4.911 1.00 38.86 P
ATOM 3 OP1 C A 18 2.863 -0.009 4.008 1.00 40.21 O
ATOM 4 OP2 C A 18 2.983 -2.445 4.849 1.00 36.34 O
ATOM 5 O5' C A 18 5.043 -1.088 4.808 1.00 35.52 O
ATOM 6 C5' C A 18 5.871 0.103 4.976 1.00 36.20 C
ATOM 7 C4' C A 18 7.282 -0.309 5.390 1.00 34.16 C
ATOM 8 O4' C A 18 7.253 -0.788 6.768 1.00 31.70 O
ATOM 9 C3' C A 18 7.912 -1.509 4.665 1.00 36.23 C
ATOM 10 O3' C A 18 8.380 -1.258 3.322 1.00 39.28 O
ATOM 11 C2' C A 18 9.047 -1.766 5.645 1.00 33.86 C
ATOM 12 O2' C A 18 9.931 -0.674 5.663 1.00 37.01 O
ATOM 13 C1' C A 18 8.259 -1.778 6.973 1.00 29.87 C
ATOM 14 N1 C A 18 7.627 -3.109 7.338 1.00 24.04 N
ATOM 15 C2 C A 18 8.448 -4.069 7.886 1.00 22.96 C
ATOM 16 O2 C A 18 9.637 -3.828 8.067 1.00 25.51 O
ATOM 17 N3 C A 18 7.924 -5.276 8.215 1.00 25.43 N
ATOM 18 C4 C A 18 6.624 -5.557 7.995 1.00 24.15 C
ATOM 19 N4 C A 18 6.246 -6.786 8.359 1.00 22.70 N
ATOM 20 C5 C A 18 5.731 -4.593 7.411 1.00 20.60 C
ATOM 21 C6 C A 18 6.283 -3.389 7.101 1.00 21.55 C
ATOM 22 P C A 19 8.306 -2.350 2.162 1.00 42.20 P
ATOM 23 OP1 C A 19 8.534 -1.585 0.919 1.00 46.83 O
ATOM 24 OP2 C A 19 7.050 -3.136 2.257 1.00 40.54 O
ATOM 25 O5' C A 19 9.537 -3.355 2.431 1.00 44.20 O
TER
ATOM 1 O3' C B 16 -1.460 -2.332 9.666 1.00 27.63 O
ATOM 2 P A B 17 -0.730 -2.809 8.279 1.00 26.53 P
ATOM 3 OP1 A B 17 -1.566 -2.442 7.147 1.00 31.60 O
ATOM 4 OP2 A B 17 -0.358 -4.198 8.397 1.00 28.79 O
ATOM 5 O5' A B 17 0.607 -1.947 8.314 1.00 28.48 O
ATOM 6 C5' A B 17 0.672 -0.516 8.213 1.00 34.00 C
ATOM 7 C4' A B 17 2.115 -0.080 8.386 1.00 33.49 C
ATOM 8 O4' A B 17 2.592 -0.451 9.690 1.00 37.06 O
ATOM 9 C3' A B 17 3.154 -0.792 7.526 1.00 35.84 C
ATOM 10 O3' A B 17 3.134 -0.236 6.245 1.00 37.94 O
ATOM 11 C2' A B 17 4.407 -0.309 8.216 1.00 33.91 C
ATOM 12 O2' A B 17 4.548 1.063 8.023 1.00 32.67 O
ATOM 13 C1' A B 17 4.025 -0.591 9.658 1.00 32.47 C
ATOM 14 N9 A B 17 4.379 -1.966 10.063 1.00 29.78 N
ATOM 15 C8 A B 17 3.540 -3.040 10.147 1.00 25.01 C
ATOM 16 N7 A B 17 4.121 -4.136 10.526 1.00 26.63 N
ATOM 17 C5 A B 17 5.449 -3.726 10.724 1.00 28.87 C
ATOM 18 C6 A B 17 6.618 -4.396 11.145 1.00 27.27 C
ATOM 19 N6 A B 17 6.643 -5.677 11.483 1.00 29.06 N
ATOM 20 N1 A B 17 7.775 -3.697 11.213 1.00 29.93 N
ATOM 21 C2 A B 17 7.810 -2.386 10.870 1.00 27.89 C
ATOM 22 N3 A B 17 6.767 -1.647 10.480 1.00 29.85 N
ATOM 23 C4 A B 17 5.622 -2.385 10.441 1.00 27.32 C
ATOM 24 P C B 18 3.437 -1.022 4.911 1.00 38.86 P
ATOM 25 OP1 C B 18 2.863 -0.009 4.008 1.00 40.21 O
ATOM 26 OP2 C B 18 2.983 -2.445 4.849 1.00 36.34 O
ATOM 27 O5' C B 18 5.043 -1.088 4.808 1.00 35.52 O
TER
Atoms:
C2: (8.448,-4.069,7.886)
OP1: (2.863,-0.009,4.008)
OP2: (2.983,-2.445,4.849)
C4: (6.624,-5.557,7.995)
O5': (5.043,-1.088,4.808)
C3': (7.912,-1.509,4.665)
C1': (8.259,-1.778,6.973)
O4': (7.253,-0.788,6.768)
C5': (5.871,0.103,4.976)
P: (3.437,-1.022,4.911)
O2: (9.637,-3.828,8.067)
C4': (7.282,-0.309,5.390)
C2': (9.047,-1.766,5.645)
O2': (9.931,-0.674,5.663)
N1: (7.627,-3.109,7.338)
N3: (7.924,-5.276,8.215)
N4: (6.246,-6.786,8.359)
C6: (6.283,-3.389,7.101)
C5: (5.731,-4.593,7.411)
O3': (8.380,-1.258,3.322)
OP1: (2.863,-0.009,4.008)
OP2: (2.983,-2.445,4.849)
C4: (6.624,-5.557,7.995)
O5': (5.043,-1.088,4.808)
C3': (7.912,-1.509,4.665)
C1': (8.259,-1.778,6.973)
O4': (7.253,-0.788,6.768)
C5': (5.871,0.103,4.976)
P: (3.437,-1.022,4.911)
O2: (9.637,-3.828,8.067)
C4': (7.282,-0.309,5.390)
C2': (9.047,-1.766,5.645)
O2': (9.931,-0.674,5.663)
N1: (7.627,-3.109,7.338)
N3: (7.924,-5.276,8.215)
N4: (6.246,-6.786,8.359)
C6: (6.283,-3.389,7.101)
C5: (5.731,-4.593,7.411)
O3': (8.380,-1.258,3.322)
OP1: (-1.566,-2.442,7.147)
OP2: (-0.358,-4.198,8.397)
C3': (3.154,-0.792,7.526)
C1': (4.025,-0.591,9.658)
C5': (0.672,-0.516,8.213)
O4': (2.592,-0.451,9.690)
C8: (3.540,-3.040,10.147)
O2': (4.548,1.063,8.023)
C6: (6.618,-4.396,11.145)
C5: (5.449,-3.726,10.724)
C4: (5.622,-2.385,10.441)
P: (-0.730,-2.809,8.279)
C4': (2.115,-0.080,8.386)
C2': (4.407,-0.309,8.216)
C2: (7.810,-2.386,10.870)
N1: (7.775,-3.697,11.213)
N3: (6.767,-1.647,10.480)
N6: (6.643,-5.677,11.483)
N7: (4.121,-4.136,10.526)
N9: (4.379,-1.966,10.063)
O5': (0.607,-1.947,8.314)
O3': (3.134,-0.236,6.245)
OP2: (-0.358,-4.198,8.397)
C3': (3.154,-0.792,7.526)
C1': (4.025,-0.591,9.658)
C5': (0.672,-0.516,8.213)
O4': (2.592,-0.451,9.690)
C8: (3.540,-3.040,10.147)
O2': (4.548,1.063,8.023)
C6: (6.618,-4.396,11.145)
C5: (5.449,-3.726,10.724)
C4: (5.622,-2.385,10.441)
P: (-0.730,-2.809,8.279)
C4': (2.115,-0.080,8.386)
C2': (4.407,-0.309,8.216)
C2: (7.810,-2.386,10.870)
N1: (7.775,-3.697,11.213)
N3: (6.767,-1.647,10.480)
N6: (6.643,-5.677,11.483)
N7: (4.121,-4.136,10.526)
N9: (4.379,-1.966,10.063)
O5': (0.607,-1.947,8.314)
O3': (3.134,-0.236,6.245)
Image (generated by PyMOL):