Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0267:0266
Extra
PDB:
ATOM 1 O3' A A 266 85.340 95.705 -19.008 1.00 99.21 O
ATOM 2 P C A 267 84.165 96.622 -19.609 1.00101.38 P
ATOM 3 OP1 C A 267 84.640 97.150 -20.916 1.00101.12 O
ATOM 4 OP2 C A 267 83.695 97.569 -18.567 1.00101.26 O
ATOM 5 O5' C A 267 83.006 95.570 -19.884 1.00103.05 O
ATOM 6 C5' C A 267 81.631 95.908 -19.676 1.00105.76 C
ATOM 7 C4' C A 267 80.891 94.714 -19.134 1.00108.64 C
ATOM 8 O4' C A 267 81.434 94.361 -17.830 1.00109.45 O
ATOM 9 C3' C A 267 79.419 94.945 -18.859 1.00109.74 C
ATOM 10 O3' C A 267 78.627 94.842 -20.030 1.00111.07 O
ATOM 11 C2' C A 267 79.112 93.866 -17.835 1.00109.84 C
ATOM 12 O2' C A 267 78.962 92.584 -18.414 1.00109.23 O
ATOM 13 C1' C A 267 80.383 93.911 -16.982 1.00110.05 C
ATOM 14 N1 C A 267 80.252 94.848 -15.843 1.00110.14 N
ATOM 15 C2 C A 267 79.468 94.469 -14.739 1.00110.60 C
ATOM 16 O2 C A 267 78.919 93.354 -14.740 1.00111.26 O
ATOM 17 N3 C A 267 79.328 95.327 -13.703 1.00110.35 N
ATOM 18 C4 C A 267 79.930 96.516 -13.734 1.00109.82 C
ATOM 19 N4 C A 267 79.759 97.328 -12.689 1.00109.37 N
ATOM 20 C5 C A 267 80.736 96.925 -14.837 1.00109.67 C
ATOM 21 C6 C A 267 80.870 96.070 -15.858 1.00109.58 C
ATOM 22 P C A 268 77.219 95.607 -20.091 1.00113.06 P
ATOM 23 OP1 C A 268 76.600 95.316 -21.407 1.00114.03 O
ATOM 24 OP2 C A 268 77.432 97.020 -19.678 1.00112.77 O
ATOM 25 O5' C A 268 76.363 94.889 -18.958 1.00114.08 O
TER
ATOM 1 O3' U B 265 89.150 98.629 -15.409 1.00 83.86 O
ATOM 2 P A B 266 87.884 98.807 -16.379 1.00 87.37 P
ATOM 3 OP1 A B 266 88.411 99.093 -17.738 1.00 87.59 O
ATOM 4 OP2 A B 266 86.917 99.746 -15.756 1.00 86.34 O
ATOM 5 O5' A B 266 87.209 97.363 -16.377 1.00 89.57 O
ATOM 6 C5' A B 266 87.816 96.256 -17.076 1.00 93.25 C
ATOM 7 C4' A B 266 86.840 95.112 -17.181 1.00 95.28 C
ATOM 8 O4' A B 266 86.653 94.503 -15.876 1.00 96.09 O
ATOM 9 C3' A B 266 85.443 95.526 -17.603 1.00 96.78 C
ATOM 10 O3' A B 266 85.340 95.705 -19.008 1.00 99.21 O
ATOM 11 C2' A B 266 84.584 94.399 -17.048 1.00 96.88 C
ATOM 12 O2' A B 266 84.576 93.242 -17.860 1.00 96.45 O
ATOM 13 C1' A B 266 85.295 94.116 -15.719 1.00 96.79 C
ATOM 14 N9 A B 266 84.727 94.884 -14.608 1.00 97.33 N
ATOM 15 C8 A B 266 85.122 96.118 -14.142 1.00 97.40 C
ATOM 16 N7 A B 266 84.391 96.567 -13.150 1.00 97.17 N
ATOM 17 C5 A B 266 83.457 95.561 -12.942 1.00 96.94 C
ATOM 18 C6 A B 266 82.391 95.433 -12.036 1.00 96.59 C
ATOM 19 N6 A B 266 82.061 96.367 -11.141 1.00 97.19 N
ATOM 20 N1 A B 266 81.659 94.302 -12.086 1.00 95.73 N
ATOM 21 C2 A B 266 81.976 93.373 -12.991 1.00 95.61 C
ATOM 22 N3 A B 266 82.944 93.380 -13.901 1.00 96.56 N
ATOM 23 C4 A B 266 83.658 94.515 -13.824 1.00 96.99 C
ATOM 24 P C B 267 84.165 96.622 -19.609 1.00101.38 P
ATOM 25 OP1 C B 267 84.640 97.150 -20.916 1.00101.12 O
ATOM 26 OP2 C B 267 83.695 97.569 -18.567 1.00101.26 O
ATOM 27 O5' C B 267 83.006 95.570 -19.884 1.00103.05 O
TER
ATOM 2 P C A 267 84.165 96.622 -19.609 1.00101.38 P
ATOM 3 OP1 C A 267 84.640 97.150 -20.916 1.00101.12 O
ATOM 4 OP2 C A 267 83.695 97.569 -18.567 1.00101.26 O
ATOM 5 O5' C A 267 83.006 95.570 -19.884 1.00103.05 O
ATOM 6 C5' C A 267 81.631 95.908 -19.676 1.00105.76 C
ATOM 7 C4' C A 267 80.891 94.714 -19.134 1.00108.64 C
ATOM 8 O4' C A 267 81.434 94.361 -17.830 1.00109.45 O
ATOM 9 C3' C A 267 79.419 94.945 -18.859 1.00109.74 C
ATOM 10 O3' C A 267 78.627 94.842 -20.030 1.00111.07 O
ATOM 11 C2' C A 267 79.112 93.866 -17.835 1.00109.84 C
ATOM 12 O2' C A 267 78.962 92.584 -18.414 1.00109.23 O
ATOM 13 C1' C A 267 80.383 93.911 -16.982 1.00110.05 C
ATOM 14 N1 C A 267 80.252 94.848 -15.843 1.00110.14 N
ATOM 15 C2 C A 267 79.468 94.469 -14.739 1.00110.60 C
ATOM 16 O2 C A 267 78.919 93.354 -14.740 1.00111.26 O
ATOM 17 N3 C A 267 79.328 95.327 -13.703 1.00110.35 N
ATOM 18 C4 C A 267 79.930 96.516 -13.734 1.00109.82 C
ATOM 19 N4 C A 267 79.759 97.328 -12.689 1.00109.37 N
ATOM 20 C5 C A 267 80.736 96.925 -14.837 1.00109.67 C
ATOM 21 C6 C A 267 80.870 96.070 -15.858 1.00109.58 C
ATOM 22 P C A 268 77.219 95.607 -20.091 1.00113.06 P
ATOM 23 OP1 C A 268 76.600 95.316 -21.407 1.00114.03 O
ATOM 24 OP2 C A 268 77.432 97.020 -19.678 1.00112.77 O
ATOM 25 O5' C A 268 76.363 94.889 -18.958 1.00114.08 O
TER
ATOM 1 O3' U B 265 89.150 98.629 -15.409 1.00 83.86 O
ATOM 2 P A B 266 87.884 98.807 -16.379 1.00 87.37 P
ATOM 3 OP1 A B 266 88.411 99.093 -17.738 1.00 87.59 O
ATOM 4 OP2 A B 266 86.917 99.746 -15.756 1.00 86.34 O
ATOM 5 O5' A B 266 87.209 97.363 -16.377 1.00 89.57 O
ATOM 6 C5' A B 266 87.816 96.256 -17.076 1.00 93.25 C
ATOM 7 C4' A B 266 86.840 95.112 -17.181 1.00 95.28 C
ATOM 8 O4' A B 266 86.653 94.503 -15.876 1.00 96.09 O
ATOM 9 C3' A B 266 85.443 95.526 -17.603 1.00 96.78 C
ATOM 10 O3' A B 266 85.340 95.705 -19.008 1.00 99.21 O
ATOM 11 C2' A B 266 84.584 94.399 -17.048 1.00 96.88 C
ATOM 12 O2' A B 266 84.576 93.242 -17.860 1.00 96.45 O
ATOM 13 C1' A B 266 85.295 94.116 -15.719 1.00 96.79 C
ATOM 14 N9 A B 266 84.727 94.884 -14.608 1.00 97.33 N
ATOM 15 C8 A B 266 85.122 96.118 -14.142 1.00 97.40 C
ATOM 16 N7 A B 266 84.391 96.567 -13.150 1.00 97.17 N
ATOM 17 C5 A B 266 83.457 95.561 -12.942 1.00 96.94 C
ATOM 18 C6 A B 266 82.391 95.433 -12.036 1.00 96.59 C
ATOM 19 N6 A B 266 82.061 96.367 -11.141 1.00 97.19 N
ATOM 20 N1 A B 266 81.659 94.302 -12.086 1.00 95.73 N
ATOM 21 C2 A B 266 81.976 93.373 -12.991 1.00 95.61 C
ATOM 22 N3 A B 266 82.944 93.380 -13.901 1.00 96.56 N
ATOM 23 C4 A B 266 83.658 94.515 -13.824 1.00 96.99 C
ATOM 24 P C B 267 84.165 96.622 -19.609 1.00101.38 P
ATOM 25 OP1 C B 267 84.640 97.150 -20.916 1.00101.12 O
ATOM 26 OP2 C B 267 83.695 97.569 -18.567 1.00101.26 O
ATOM 27 O5' C B 267 83.006 95.570 -19.884 1.00103.05 O
TER
Atoms:
C2: (79.468,94.469,-14.739)
OP1: (84.640,97.150,-20.916)
OP2: (83.695,97.569,-18.567)
C4: (79.930,96.516,-13.734)
O5': (83.006,95.570,-19.884)
C3': (79.419,94.945,-18.859)
C1': (80.383,93.911,-16.982)
O4': (81.434,94.361,-17.830)
C5': (81.631,95.908,-19.676)
P: (84.165,96.622,-19.609)
O2: (78.919,93.354,-14.740)
C4': (80.891,94.714,-19.134)
C2': (79.112,93.866,-17.835)
O2': (78.962,92.584,-18.414)
N1: (80.252,94.848,-15.843)
N3: (79.328,95.327,-13.703)
N4: (79.759,97.328,-12.689)
C6: (80.870,96.070,-15.858)
C5: (80.736,96.925,-14.837)
O3': (78.627,94.842,-20.030)
OP1: (84.640,97.150,-20.916)
OP2: (83.695,97.569,-18.567)
C4: (79.930,96.516,-13.734)
O5': (83.006,95.570,-19.884)
C3': (79.419,94.945,-18.859)
C1': (80.383,93.911,-16.982)
O4': (81.434,94.361,-17.830)
C5': (81.631,95.908,-19.676)
P: (84.165,96.622,-19.609)
O2: (78.919,93.354,-14.740)
C4': (80.891,94.714,-19.134)
C2': (79.112,93.866,-17.835)
O2': (78.962,92.584,-18.414)
N1: (80.252,94.848,-15.843)
N3: (79.328,95.327,-13.703)
N4: (79.759,97.328,-12.689)
C6: (80.870,96.070,-15.858)
C5: (80.736,96.925,-14.837)
O3': (78.627,94.842,-20.030)
OP1: (88.411,99.093,-17.738)
OP2: (86.917,99.746,-15.756)
C3': (85.443,95.526,-17.603)
C1': (85.295,94.116,-15.719)
C5': (87.816,96.256,-17.076)
O4': (86.653,94.503,-15.876)
C8: (85.122,96.118,-14.142)
O2': (84.576,93.242,-17.860)
C6: (82.391,95.433,-12.036)
C5: (83.457,95.561,-12.942)
C4: (83.658,94.515,-13.824)
P: (87.884,98.807,-16.379)
C4': (86.840,95.112,-17.181)
C2': (84.584,94.399,-17.048)
C2: (81.976,93.373,-12.991)
N1: (81.659,94.302,-12.086)
N3: (82.944,93.380,-13.901)
N6: (82.061,96.367,-11.141)
N7: (84.391,96.567,-13.150)
N9: (84.727,94.884,-14.608)
O5': (87.209,97.363,-16.377)
O3': (85.340,95.705,-19.008)
OP2: (86.917,99.746,-15.756)
C3': (85.443,95.526,-17.603)
C1': (85.295,94.116,-15.719)
C5': (87.816,96.256,-17.076)
O4': (86.653,94.503,-15.876)
C8: (85.122,96.118,-14.142)
O2': (84.576,93.242,-17.860)
C6: (82.391,95.433,-12.036)
C5: (83.457,95.561,-12.942)
C4: (83.658,94.515,-13.824)
P: (87.884,98.807,-16.379)
C4': (86.840,95.112,-17.181)
C2': (84.584,94.399,-17.048)
C2: (81.976,93.373,-12.991)
N1: (81.659,94.302,-12.086)
N3: (82.944,93.380,-13.901)
N6: (82.061,96.367,-11.141)
N7: (84.391,96.567,-13.150)
N9: (84.727,94.884,-14.608)
O5': (87.209,97.363,-16.377)
O3': (85.340,95.705,-19.008)
Image (generated by PyMOL):