Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02065:02064
Extra
PDB:
ATOM 1 O3' A A2064 90.671 99.032 73.394 1.00 26.15 O
ATOM 2 P C A2065 91.038 98.881 71.840 1.00 28.83 P
ATOM 3 OP1 C A2065 91.583 97.524 71.620 1.00 32.87 O
ATOM 4 OP2 C A2065 91.823 100.054 71.404 1.00 30.03 O
ATOM 5 O5' C A2065 89.624 98.949 71.124 1.00 29.81 O
ATOM 6 C5' C A2065 88.677 97.884 71.253 1.00 25.51 C
ATOM 7 C4' C A2065 87.557 98.082 70.274 1.00 26.28 C
ATOM 8 O4' C A2065 86.740 99.199 70.697 1.00 26.14 O
ATOM 9 C3' C A2065 87.999 98.459 68.872 1.00 27.08 C
ATOM 10 O3' C A2065 88.346 97.318 68.111 1.00 29.76 O
ATOM 11 C2' C A2065 86.760 99.138 68.326 1.00 28.04 C
ATOM 12 O2' C A2065 85.782 98.195 67.940 1.00 28.16 O
ATOM 13 C1' C A2065 86.281 99.905 69.559 1.00 26.31 C
ATOM 14 N1 C A2065 86.818 101.273 69.614 1.00 27.40 N
ATOM 15 C2 C A2065 86.175 102.274 68.892 1.00 27.20 C
ATOM 16 O2 C A2065 85.190 101.980 68.210 1.00 26.65 O
ATOM 17 N3 C A2065 86.649 103.536 68.946 1.00 29.52 N
ATOM 18 C4 C A2065 87.728 103.814 69.676 1.00 29.02 C
ATOM 19 N4 C A2065 88.152 105.079 69.705 1.00 30.08 N
ATOM 20 C5 C A2065 88.416 102.811 70.412 1.00 28.56 C
ATOM 21 C6 C A2065 87.930 101.568 70.357 1.00 28.98 C
ATOM 22 P U A2066 89.424 97.448 66.926 1.00 32.33 P
ATOM 23 OP1 U A2066 89.539 96.077 66.346 1.00 29.96 O
ATOM 24 OP2 U A2066 90.636 98.151 67.421 1.00 30.71 O
ATOM 25 O5' U A2066 88.722 98.399 65.864 1.00 30.45 O
TER
ATOM 1 O3' U B2063 94.446 102.058 74.763 1.00 38.53 O
ATOM 2 P A B2064 93.261 103.099 75.018 1.00 34.23 P
ATOM 3 OP1 A B2064 93.284 104.056 73.890 1.00 37.59 O
ATOM 4 OP2 A B2064 93.352 103.598 76.415 1.00 33.92 O
ATOM 5 O5' A B2064 91.945 102.222 74.897 1.00 35.16 O
ATOM 6 C5' A B2064 91.774 101.013 75.663 1.00 29.78 C
ATOM 7 C4' A B2064 90.423 100.431 75.366 1.00 28.77 C
ATOM 8 O4' A B2064 89.415 101.380 75.807 1.00 31.30 O
ATOM 9 C3' A B2064 90.162 100.264 73.877 1.00 28.64 C
ATOM 10 O3' A B2064 90.671 99.032 73.394 1.00 26.15 O
ATOM 11 C2' A B2064 88.650 100.388 73.782 1.00 29.41 C
ATOM 12 O2' A B2064 87.995 99.197 74.151 1.00 30.70 O
ATOM 13 C1' A B2064 88.371 101.455 74.847 1.00 31.64 C
ATOM 14 N9 A B2064 88.280 102.842 74.363 1.00 31.78 N
ATOM 15 C8 A B2064 89.122 103.888 74.641 1.00 29.81 C
ATOM 16 N7 A B2064 88.754 105.022 74.101 1.00 30.28 N
ATOM 17 C5 A B2064 87.599 104.704 73.404 1.00 30.96 C
ATOM 18 C6 A B2064 86.718 105.475 72.612 1.00 31.06 C
ATOM 19 N6 A B2064 86.868 106.779 72.375 1.00 27.61 N
ATOM 20 N1 A B2064 85.658 104.846 72.065 1.00 31.39 N
ATOM 21 C2 A B2064 85.498 103.540 72.297 1.00 30.44 C
ATOM 22 N3 A B2064 86.249 102.713 73.015 1.00 31.70 N
ATOM 23 C4 A B2064 87.297 103.363 73.550 1.00 31.68 C
ATOM 24 P C B2065 91.038 98.881 71.840 1.00 28.83 P
ATOM 25 OP1 C B2065 91.583 97.524 71.620 1.00 32.87 O
ATOM 26 OP2 C B2065 91.823 100.054 71.404 1.00 30.03 O
ATOM 27 O5' C B2065 89.624 98.949 71.124 1.00 29.81 O
TER
ATOM 2 P C A2065 91.038 98.881 71.840 1.00 28.83 P
ATOM 3 OP1 C A2065 91.583 97.524 71.620 1.00 32.87 O
ATOM 4 OP2 C A2065 91.823 100.054 71.404 1.00 30.03 O
ATOM 5 O5' C A2065 89.624 98.949 71.124 1.00 29.81 O
ATOM 6 C5' C A2065 88.677 97.884 71.253 1.00 25.51 C
ATOM 7 C4' C A2065 87.557 98.082 70.274 1.00 26.28 C
ATOM 8 O4' C A2065 86.740 99.199 70.697 1.00 26.14 O
ATOM 9 C3' C A2065 87.999 98.459 68.872 1.00 27.08 C
ATOM 10 O3' C A2065 88.346 97.318 68.111 1.00 29.76 O
ATOM 11 C2' C A2065 86.760 99.138 68.326 1.00 28.04 C
ATOM 12 O2' C A2065 85.782 98.195 67.940 1.00 28.16 O
ATOM 13 C1' C A2065 86.281 99.905 69.559 1.00 26.31 C
ATOM 14 N1 C A2065 86.818 101.273 69.614 1.00 27.40 N
ATOM 15 C2 C A2065 86.175 102.274 68.892 1.00 27.20 C
ATOM 16 O2 C A2065 85.190 101.980 68.210 1.00 26.65 O
ATOM 17 N3 C A2065 86.649 103.536 68.946 1.00 29.52 N
ATOM 18 C4 C A2065 87.728 103.814 69.676 1.00 29.02 C
ATOM 19 N4 C A2065 88.152 105.079 69.705 1.00 30.08 N
ATOM 20 C5 C A2065 88.416 102.811 70.412 1.00 28.56 C
ATOM 21 C6 C A2065 87.930 101.568 70.357 1.00 28.98 C
ATOM 22 P U A2066 89.424 97.448 66.926 1.00 32.33 P
ATOM 23 OP1 U A2066 89.539 96.077 66.346 1.00 29.96 O
ATOM 24 OP2 U A2066 90.636 98.151 67.421 1.00 30.71 O
ATOM 25 O5' U A2066 88.722 98.399 65.864 1.00 30.45 O
TER
ATOM 1 O3' U B2063 94.446 102.058 74.763 1.00 38.53 O
ATOM 2 P A B2064 93.261 103.099 75.018 1.00 34.23 P
ATOM 3 OP1 A B2064 93.284 104.056 73.890 1.00 37.59 O
ATOM 4 OP2 A B2064 93.352 103.598 76.415 1.00 33.92 O
ATOM 5 O5' A B2064 91.945 102.222 74.897 1.00 35.16 O
ATOM 6 C5' A B2064 91.774 101.013 75.663 1.00 29.78 C
ATOM 7 C4' A B2064 90.423 100.431 75.366 1.00 28.77 C
ATOM 8 O4' A B2064 89.415 101.380 75.807 1.00 31.30 O
ATOM 9 C3' A B2064 90.162 100.264 73.877 1.00 28.64 C
ATOM 10 O3' A B2064 90.671 99.032 73.394 1.00 26.15 O
ATOM 11 C2' A B2064 88.650 100.388 73.782 1.00 29.41 C
ATOM 12 O2' A B2064 87.995 99.197 74.151 1.00 30.70 O
ATOM 13 C1' A B2064 88.371 101.455 74.847 1.00 31.64 C
ATOM 14 N9 A B2064 88.280 102.842 74.363 1.00 31.78 N
ATOM 15 C8 A B2064 89.122 103.888 74.641 1.00 29.81 C
ATOM 16 N7 A B2064 88.754 105.022 74.101 1.00 30.28 N
ATOM 17 C5 A B2064 87.599 104.704 73.404 1.00 30.96 C
ATOM 18 C6 A B2064 86.718 105.475 72.612 1.00 31.06 C
ATOM 19 N6 A B2064 86.868 106.779 72.375 1.00 27.61 N
ATOM 20 N1 A B2064 85.658 104.846 72.065 1.00 31.39 N
ATOM 21 C2 A B2064 85.498 103.540 72.297 1.00 30.44 C
ATOM 22 N3 A B2064 86.249 102.713 73.015 1.00 31.70 N
ATOM 23 C4 A B2064 87.297 103.363 73.550 1.00 31.68 C
ATOM 24 P C B2065 91.038 98.881 71.840 1.00 28.83 P
ATOM 25 OP1 C B2065 91.583 97.524 71.620 1.00 32.87 O
ATOM 26 OP2 C B2065 91.823 100.054 71.404 1.00 30.03 O
ATOM 27 O5' C B2065 89.624 98.949 71.124 1.00 29.81 O
TER
Atoms:
C2: (86.175,102.274,68.892)
OP1: (91.583,97.524,71.620)
OP2: (91.823,100.054,71.404)
C4: (87.728,103.814,69.676)
O5': (89.624,98.949,71.124)
C3': (87.999,98.459,68.872)
C1': (86.281,99.905,69.559)
O4': (86.740,99.199,70.697)
C5': (88.677,97.884,71.253)
P: (91.038,98.881,71.840)
O2: (85.190,101.980,68.210)
C4': (87.557,98.082,70.274)
C2': (86.760,99.138,68.326)
O2': (85.782,98.195,67.940)
N1: (86.818,101.273,69.614)
N3: (86.649,103.536,68.946)
N4: (88.152,105.079,69.705)
C6: (87.930,101.568,70.357)
C5: (88.416,102.811,70.412)
O3': (88.346,97.318,68.111)
OP1: (91.583,97.524,71.620)
OP2: (91.823,100.054,71.404)
C4: (87.728,103.814,69.676)
O5': (89.624,98.949,71.124)
C3': (87.999,98.459,68.872)
C1': (86.281,99.905,69.559)
O4': (86.740,99.199,70.697)
C5': (88.677,97.884,71.253)
P: (91.038,98.881,71.840)
O2: (85.190,101.980,68.210)
C4': (87.557,98.082,70.274)
C2': (86.760,99.138,68.326)
O2': (85.782,98.195,67.940)
N1: (86.818,101.273,69.614)
N3: (86.649,103.536,68.946)
N4: (88.152,105.079,69.705)
C6: (87.930,101.568,70.357)
C5: (88.416,102.811,70.412)
O3': (88.346,97.318,68.111)
OP1: (93.284,104.056,73.890)
OP2: (93.352,103.598,76.415)
C3': (90.162,100.264,73.877)
C1': (88.371,101.455,74.847)
C5': (91.774,101.013,75.663)
O4': (89.415,101.380,75.807)
C8: (89.122,103.888,74.641)
O2': (87.995,99.197,74.151)
C6: (86.718,105.475,72.612)
C5: (87.599,104.704,73.404)
C4: (87.297,103.363,73.550)
P: (93.261,103.099,75.018)
C4': (90.423,100.431,75.366)
C2': (88.650,100.388,73.782)
C2: (85.498,103.540,72.297)
N1: (85.658,104.846,72.065)
N3: (86.249,102.713,73.015)
N6: (86.868,106.779,72.375)
N7: (88.754,105.022,74.101)
N9: (88.280,102.842,74.363)
O5': (91.945,102.222,74.897)
O3': (90.671,99.032,73.394)
OP2: (93.352,103.598,76.415)
C3': (90.162,100.264,73.877)
C1': (88.371,101.455,74.847)
C5': (91.774,101.013,75.663)
O4': (89.415,101.380,75.807)
C8: (89.122,103.888,74.641)
O2': (87.995,99.197,74.151)
C6: (86.718,105.475,72.612)
C5: (87.599,104.704,73.404)
C4: (87.297,103.363,73.550)
P: (93.261,103.099,75.018)
C4': (90.423,100.431,75.366)
C2': (88.650,100.388,73.782)
C2: (85.498,103.540,72.297)
N1: (85.658,104.846,72.065)
N3: (86.249,102.713,73.015)
N6: (86.868,106.779,72.375)
N7: (88.754,105.022,74.101)
N9: (88.280,102.842,74.363)
O5': (91.945,102.222,74.897)
O3': (90.671,99.032,73.394)
Image (generated by PyMOL):