Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PN4:A8:A7
Extra
PDB:
ATOM 1 O3' A A 7 -25.837 -7.274 13.168 1.00 50.48 O
ATOM 2 P C A 8 -26.024 -5.728 13.496 1.00 51.52 P
ATOM 3 OP1 C A 8 -27.179 -5.668 14.403 1.00 51.45 O
ATOM 4 OP2 C A 8 -26.043 -4.878 12.292 1.00 51.63 O
ATOM 5 O5' C A 8 -24.654 -5.386 14.229 1.00 51.73 O
ATOM 6 C5' C A 8 -23.865 -6.322 14.979 1.00 52.27 C
ATOM 7 C4' C A 8 -22.425 -5.846 15.046 1.00 52.43 C
ATOM 8 O4' C A 8 -21.699 -6.262 13.862 1.00 50.79 O
ATOM 9 C3' C A 8 -22.228 -4.334 15.063 1.00 52.95 C
ATOM 10 O3' C A 8 -22.305 -3.924 16.373 1.00 54.93 O
ATOM 11 C2' C A 8 -20.790 -4.240 14.572 1.00 52.10 C
ATOM 12 O2' C A 8 -19.835 -4.761 15.497 1.00 54.12 O
ATOM 13 C1' C A 8 -20.863 -5.210 13.413 1.00 49.58 C
ATOM 14 N1 C A 8 -21.301 -4.638 12.071 1.00 48.09 N
ATOM 15 C2 C A 8 -20.319 -4.075 11.247 1.00 47.43 C
ATOM 16 O2 C A 8 -19.149 -4.049 11.655 1.00 47.19 O
ATOM 17 N3 C A 8 -20.667 -3.547 10.040 1.00 45.93 N
ATOM 18 C4 C A 8 -21.942 -3.582 9.644 1.00 47.31 C
ATOM 19 N4 C A 8 -22.235 -3.073 8.435 1.00 46.57 N
ATOM 20 C5 C A 8 -22.968 -4.148 10.471 1.00 46.81 C
ATOM 21 C6 C A 8 -22.609 -4.662 11.653 1.00 47.30 C
ATOM 22 P U A 9 -23.029 -2.617 16.947 1.00 58.13 P
ATOM 23 OP1 U A 9 -23.703 -3.139 18.169 1.00 58.33 O
ATOM 24 OP2 U A 9 -23.747 -1.812 15.943 1.00 58.57 O
ATOM 25 O5' U A 9 -21.822 -1.719 17.465 1.00 57.92 O
TER
ATOM 1 O3' A B 6 -27.727 -9.367 7.564 1.00 46.68 O
ATOM 2 P A B 7 -27.875 -7.988 8.342 1.00 47.48 P
ATOM 3 OP1 A B 7 -29.238 -7.962 8.897 1.00 47.69 O
ATOM 4 OP2 A B 7 -27.436 -6.902 7.442 1.00 45.98 O
ATOM 5 O5' A B 7 -26.822 -8.099 9.530 1.00 48.29 O
ATOM 6 C5' A B 7 -27.166 -8.637 10.804 1.00 48.01 C
ATOM 7 C4' A B 7 -25.887 -8.960 11.580 1.00 47.72 C
ATOM 8 O4' A B 7 -24.864 -9.615 10.772 1.00 46.70 O
ATOM 9 C3' A B 7 -25.149 -7.737 12.063 1.00 48.15 C
ATOM 10 O3' A B 7 -25.837 -7.274 13.168 1.00 50.48 O
ATOM 11 C2' A B 7 -23.826 -8.388 12.434 1.00 47.86 C
ATOM 12 O2' A B 7 -23.973 -9.344 13.468 1.00 50.91 O
ATOM 13 C1' A B 7 -23.568 -9.146 11.163 1.00 45.73 C
ATOM 14 N9 A B 7 -22.964 -8.342 10.099 1.00 44.35 N
ATOM 15 C8 A B 7 -23.611 -7.867 8.994 1.00 41.92 C
ATOM 16 N7 A B 7 -22.849 -7.184 8.199 1.00 42.28 N
ATOM 17 C5 A B 7 -21.612 -7.196 8.815 1.00 43.49 C
ATOM 18 C6 A B 7 -20.366 -6.632 8.456 1.00 44.59 C
ATOM 19 N6 A B 7 -20.156 -5.930 7.329 1.00 42.59 N
ATOM 20 N1 A B 7 -19.335 -6.810 9.317 1.00 44.83 N
ATOM 21 C2 A B 7 -19.533 -7.524 10.435 1.00 45.72 C
ATOM 22 N3 A B 7 -20.650 -8.110 10.859 1.00 45.99 N
ATOM 23 C4 A B 7 -21.663 -7.907 9.996 1.00 44.15 C
ATOM 24 P C B 8 -26.024 -5.728 13.496 1.00 51.52 P
ATOM 25 OP1 C B 8 -27.179 -5.668 14.403 1.00 51.45 O
ATOM 26 OP2 C B 8 -26.043 -4.878 12.292 1.00 51.63 O
ATOM 27 O5' C B 8 -24.654 -5.386 14.229 1.00 51.73 O
TER
ATOM 2 P C A 8 -26.024 -5.728 13.496 1.00 51.52 P
ATOM 3 OP1 C A 8 -27.179 -5.668 14.403 1.00 51.45 O
ATOM 4 OP2 C A 8 -26.043 -4.878 12.292 1.00 51.63 O
ATOM 5 O5' C A 8 -24.654 -5.386 14.229 1.00 51.73 O
ATOM 6 C5' C A 8 -23.865 -6.322 14.979 1.00 52.27 C
ATOM 7 C4' C A 8 -22.425 -5.846 15.046 1.00 52.43 C
ATOM 8 O4' C A 8 -21.699 -6.262 13.862 1.00 50.79 O
ATOM 9 C3' C A 8 -22.228 -4.334 15.063 1.00 52.95 C
ATOM 10 O3' C A 8 -22.305 -3.924 16.373 1.00 54.93 O
ATOM 11 C2' C A 8 -20.790 -4.240 14.572 1.00 52.10 C
ATOM 12 O2' C A 8 -19.835 -4.761 15.497 1.00 54.12 O
ATOM 13 C1' C A 8 -20.863 -5.210 13.413 1.00 49.58 C
ATOM 14 N1 C A 8 -21.301 -4.638 12.071 1.00 48.09 N
ATOM 15 C2 C A 8 -20.319 -4.075 11.247 1.00 47.43 C
ATOM 16 O2 C A 8 -19.149 -4.049 11.655 1.00 47.19 O
ATOM 17 N3 C A 8 -20.667 -3.547 10.040 1.00 45.93 N
ATOM 18 C4 C A 8 -21.942 -3.582 9.644 1.00 47.31 C
ATOM 19 N4 C A 8 -22.235 -3.073 8.435 1.00 46.57 N
ATOM 20 C5 C A 8 -22.968 -4.148 10.471 1.00 46.81 C
ATOM 21 C6 C A 8 -22.609 -4.662 11.653 1.00 47.30 C
ATOM 22 P U A 9 -23.029 -2.617 16.947 1.00 58.13 P
ATOM 23 OP1 U A 9 -23.703 -3.139 18.169 1.00 58.33 O
ATOM 24 OP2 U A 9 -23.747 -1.812 15.943 1.00 58.57 O
ATOM 25 O5' U A 9 -21.822 -1.719 17.465 1.00 57.92 O
TER
ATOM 1 O3' A B 6 -27.727 -9.367 7.564 1.00 46.68 O
ATOM 2 P A B 7 -27.875 -7.988 8.342 1.00 47.48 P
ATOM 3 OP1 A B 7 -29.238 -7.962 8.897 1.00 47.69 O
ATOM 4 OP2 A B 7 -27.436 -6.902 7.442 1.00 45.98 O
ATOM 5 O5' A B 7 -26.822 -8.099 9.530 1.00 48.29 O
ATOM 6 C5' A B 7 -27.166 -8.637 10.804 1.00 48.01 C
ATOM 7 C4' A B 7 -25.887 -8.960 11.580 1.00 47.72 C
ATOM 8 O4' A B 7 -24.864 -9.615 10.772 1.00 46.70 O
ATOM 9 C3' A B 7 -25.149 -7.737 12.063 1.00 48.15 C
ATOM 10 O3' A B 7 -25.837 -7.274 13.168 1.00 50.48 O
ATOM 11 C2' A B 7 -23.826 -8.388 12.434 1.00 47.86 C
ATOM 12 O2' A B 7 -23.973 -9.344 13.468 1.00 50.91 O
ATOM 13 C1' A B 7 -23.568 -9.146 11.163 1.00 45.73 C
ATOM 14 N9 A B 7 -22.964 -8.342 10.099 1.00 44.35 N
ATOM 15 C8 A B 7 -23.611 -7.867 8.994 1.00 41.92 C
ATOM 16 N7 A B 7 -22.849 -7.184 8.199 1.00 42.28 N
ATOM 17 C5 A B 7 -21.612 -7.196 8.815 1.00 43.49 C
ATOM 18 C6 A B 7 -20.366 -6.632 8.456 1.00 44.59 C
ATOM 19 N6 A B 7 -20.156 -5.930 7.329 1.00 42.59 N
ATOM 20 N1 A B 7 -19.335 -6.810 9.317 1.00 44.83 N
ATOM 21 C2 A B 7 -19.533 -7.524 10.435 1.00 45.72 C
ATOM 22 N3 A B 7 -20.650 -8.110 10.859 1.00 45.99 N
ATOM 23 C4 A B 7 -21.663 -7.907 9.996 1.00 44.15 C
ATOM 24 P C B 8 -26.024 -5.728 13.496 1.00 51.52 P
ATOM 25 OP1 C B 8 -27.179 -5.668 14.403 1.00 51.45 O
ATOM 26 OP2 C B 8 -26.043 -4.878 12.292 1.00 51.63 O
ATOM 27 O5' C B 8 -24.654 -5.386 14.229 1.00 51.73 O
TER
Atoms:
C2: (-20.319,-4.075,11.247)
OP1: (-27.179,-5.668,14.403)
OP2: (-26.043,-4.878,12.292)
C4: (-21.942,-3.582,9.644)
O5': (-24.654,-5.386,14.229)
C3': (-22.228,-4.334,15.063)
C1': (-20.863,-5.210,13.413)
O4': (-21.699,-6.262,13.862)
C5': (-23.865,-6.322,14.979)
P: (-26.024,-5.728,13.496)
O2: (-19.149,-4.049,11.655)
C4': (-22.425,-5.846,15.046)
C2': (-20.790,-4.240,14.572)
O2': (-19.835,-4.761,15.497)
N1: (-21.301,-4.638,12.071)
N3: (-20.667,-3.547,10.040)
N4: (-22.235,-3.073,8.435)
C6: (-22.609,-4.662,11.653)
C5: (-22.968,-4.148,10.471)
O3': (-22.305,-3.924,16.373)
OP1: (-27.179,-5.668,14.403)
OP2: (-26.043,-4.878,12.292)
C4: (-21.942,-3.582,9.644)
O5': (-24.654,-5.386,14.229)
C3': (-22.228,-4.334,15.063)
C1': (-20.863,-5.210,13.413)
O4': (-21.699,-6.262,13.862)
C5': (-23.865,-6.322,14.979)
P: (-26.024,-5.728,13.496)
O2: (-19.149,-4.049,11.655)
C4': (-22.425,-5.846,15.046)
C2': (-20.790,-4.240,14.572)
O2': (-19.835,-4.761,15.497)
N1: (-21.301,-4.638,12.071)
N3: (-20.667,-3.547,10.040)
N4: (-22.235,-3.073,8.435)
C6: (-22.609,-4.662,11.653)
C5: (-22.968,-4.148,10.471)
O3': (-22.305,-3.924,16.373)
OP1: (-29.238,-7.962,8.897)
OP2: (-27.436,-6.902,7.442)
C3': (-25.149,-7.737,12.063)
C1': (-23.568,-9.146,11.163)
C5': (-27.166,-8.637,10.804)
O4': (-24.864,-9.615,10.772)
C8: (-23.611,-7.867,8.994)
O2': (-23.973,-9.344,13.468)
C6: (-20.366,-6.632,8.456)
C5: (-21.612,-7.196,8.815)
C4: (-21.663,-7.907,9.996)
P: (-27.875,-7.988,8.342)
C4': (-25.887,-8.960,11.580)
C2': (-23.826,-8.388,12.434)
C2: (-19.533,-7.524,10.435)
N1: (-19.335,-6.810,9.317)
N3: (-20.650,-8.110,10.859)
N6: (-20.156,-5.930,7.329)
N7: (-22.849,-7.184,8.199)
N9: (-22.964,-8.342,10.099)
O5': (-26.822,-8.099,9.530)
O3': (-25.837,-7.274,13.168)
OP2: (-27.436,-6.902,7.442)
C3': (-25.149,-7.737,12.063)
C1': (-23.568,-9.146,11.163)
C5': (-27.166,-8.637,10.804)
O4': (-24.864,-9.615,10.772)
C8: (-23.611,-7.867,8.994)
O2': (-23.973,-9.344,13.468)
C6: (-20.366,-6.632,8.456)
C5: (-21.612,-7.196,8.815)
C4: (-21.663,-7.907,9.996)
P: (-27.875,-7.988,8.342)
C4': (-25.887,-8.960,11.580)
C2': (-23.826,-8.388,12.434)
C2: (-19.533,-7.524,10.435)
N1: (-19.335,-6.810,9.317)
N3: (-20.650,-8.110,10.859)
N6: (-20.156,-5.930,7.329)
N7: (-22.849,-7.184,8.199)
N9: (-22.964,-8.342,10.099)
O5': (-26.822,-8.099,9.530)
O3': (-25.837,-7.274,13.168)
Image (generated by PyMOL):