Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A1234:A1233
Extra
PDB:
ATOM 1 O3' A A1233 5.249 79.895 68.493 1.00 53.11 O
ATOM 2 P C A1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 3 OP1 C A1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 4 OP2 C A1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 5 O5' C A1234 4.822 81.341 66.513 1.00 55.17 O
ATOM 6 C5' C A1234 3.382 81.343 66.448 1.00 56.13 C
ATOM 7 C4' C A1234 2.841 82.718 66.120 1.00 57.30 C
ATOM 8 O4' C A1234 3.113 83.657 67.180 1.00 56.74 O
ATOM 9 C3' C A1234 3.410 83.401 64.901 1.00 57.69 C
ATOM 10 O3' C A1234 2.838 82.905 63.738 1.00 60.73 O
ATOM 11 C2' C A1234 3.034 84.852 65.120 1.00 57.09 C
ATOM 12 O2' C A1234 1.717 85.192 64.750 1.00 56.28 O
ATOM 13 C1' C A1234 3.240 84.962 66.626 1.00 57.77 C
ATOM 14 N1 C A1234 4.605 85.418 66.861 1.00 58.71 N
ATOM 15 C2 C A1234 4.840 86.780 66.949 1.00 58.68 C
ATOM 16 O2 C A1234 3.880 87.561 66.825 1.00 60.12 O
ATOM 17 N3 C A1234 6.091 87.215 67.161 1.00 58.31 N
ATOM 18 C4 C A1234 7.086 86.337 67.289 1.00 58.70 C
ATOM 19 N4 C A1234 8.307 86.807 67.530 1.00 59.50 N
ATOM 20 C5 C A1234 6.874 84.937 67.189 1.00 58.74 C
ATOM 21 C6 C A1234 5.632 84.524 66.980 1.00 58.97 C
ATOM 22 P U A1235 3.764 82.668 62.482 1.00 63.13 P
ATOM 23 OP1 U A1235 2.865 82.081 61.461 1.00 65.27 O
ATOM 24 OP2 U A1235 4.950 81.908 62.957 1.00 62.39 O
ATOM 25 O5' U A1235 4.210 84.144 62.085 1.00 63.04 O
TER
ATOM 1 O3' C B1232 10.331 79.613 71.684 1.00 53.81 O
ATOM 2 P A B1233 9.891 79.759 70.153 1.00 54.29 P
ATOM 3 OP1 A B1233 9.902 78.407 69.528 1.00 53.65 O
ATOM 4 OP2 A B1233 10.709 80.833 69.558 1.00 54.17 O
ATOM 5 O5' A B1233 8.401 80.332 70.248 1.00 53.05 O
ATOM 6 C5' A B1233 7.332 79.556 70.828 1.00 50.37 C
ATOM 7 C4' A B1233 6.017 80.287 70.718 1.00 49.74 C
ATOM 8 O4' A B1233 5.997 81.424 71.601 1.00 49.62 O
ATOM 9 C3' A B1233 5.702 80.893 69.375 1.00 49.93 C
ATOM 10 O3' A B1233 5.249 79.895 68.493 1.00 53.11 O
ATOM 11 C2' A B1233 4.626 81.904 69.736 1.00 49.57 C
ATOM 12 O2' A B1233 3.389 81.301 70.056 1.00 49.78 O
ATOM 13 C1' A B1233 5.180 82.443 71.049 1.00 49.77 C
ATOM 14 N9 A B1233 5.989 83.652 70.885 1.00 50.27 N
ATOM 15 C8 A B1233 7.346 83.749 70.716 1.00 50.83 C
ATOM 16 N7 A B1233 7.777 84.981 70.594 1.00 49.82 N
ATOM 17 C5 A B1233 6.627 85.745 70.679 1.00 48.77 C
ATOM 18 C6 A B1233 6.412 87.115 70.604 1.00 48.21 C
ATOM 19 N6 A B1233 7.385 87.998 70.405 1.00 46.43 N
ATOM 20 N1 A B1233 5.146 87.560 70.735 1.00 48.56 N
ATOM 21 C2 A B1233 4.168 86.669 70.918 1.00 49.16 C
ATOM 22 N3 A B1233 4.245 85.349 70.994 1.00 49.35 N
ATOM 23 C4 A B1233 5.519 84.944 70.866 1.00 49.34 C
ATOM 24 P C B1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 25 OP1 C B1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 26 OP2 C B1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 27 O5' C B1234 4.822 81.341 66.513 1.00 55.17 O
TER
ATOM 2 P C A1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 3 OP1 C A1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 4 OP2 C A1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 5 O5' C A1234 4.822 81.341 66.513 1.00 55.17 O
ATOM 6 C5' C A1234 3.382 81.343 66.448 1.00 56.13 C
ATOM 7 C4' C A1234 2.841 82.718 66.120 1.00 57.30 C
ATOM 8 O4' C A1234 3.113 83.657 67.180 1.00 56.74 O
ATOM 9 C3' C A1234 3.410 83.401 64.901 1.00 57.69 C
ATOM 10 O3' C A1234 2.838 82.905 63.738 1.00 60.73 O
ATOM 11 C2' C A1234 3.034 84.852 65.120 1.00 57.09 C
ATOM 12 O2' C A1234 1.717 85.192 64.750 1.00 56.28 O
ATOM 13 C1' C A1234 3.240 84.962 66.626 1.00 57.77 C
ATOM 14 N1 C A1234 4.605 85.418 66.861 1.00 58.71 N
ATOM 15 C2 C A1234 4.840 86.780 66.949 1.00 58.68 C
ATOM 16 O2 C A1234 3.880 87.561 66.825 1.00 60.12 O
ATOM 17 N3 C A1234 6.091 87.215 67.161 1.00 58.31 N
ATOM 18 C4 C A1234 7.086 86.337 67.289 1.00 58.70 C
ATOM 19 N4 C A1234 8.307 86.807 67.530 1.00 59.50 N
ATOM 20 C5 C A1234 6.874 84.937 67.189 1.00 58.74 C
ATOM 21 C6 C A1234 5.632 84.524 66.980 1.00 58.97 C
ATOM 22 P U A1235 3.764 82.668 62.482 1.00 63.13 P
ATOM 23 OP1 U A1235 2.865 82.081 61.461 1.00 65.27 O
ATOM 24 OP2 U A1235 4.950 81.908 62.957 1.00 62.39 O
ATOM 25 O5' U A1235 4.210 84.144 62.085 1.00 63.04 O
TER
ATOM 1 O3' C B1232 10.331 79.613 71.684 1.00 53.81 O
ATOM 2 P A B1233 9.891 79.759 70.153 1.00 54.29 P
ATOM 3 OP1 A B1233 9.902 78.407 69.528 1.00 53.65 O
ATOM 4 OP2 A B1233 10.709 80.833 69.558 1.00 54.17 O
ATOM 5 O5' A B1233 8.401 80.332 70.248 1.00 53.05 O
ATOM 6 C5' A B1233 7.332 79.556 70.828 1.00 50.37 C
ATOM 7 C4' A B1233 6.017 80.287 70.718 1.00 49.74 C
ATOM 8 O4' A B1233 5.997 81.424 71.601 1.00 49.62 O
ATOM 9 C3' A B1233 5.702 80.893 69.375 1.00 49.93 C
ATOM 10 O3' A B1233 5.249 79.895 68.493 1.00 53.11 O
ATOM 11 C2' A B1233 4.626 81.904 69.736 1.00 49.57 C
ATOM 12 O2' A B1233 3.389 81.301 70.056 1.00 49.78 O
ATOM 13 C1' A B1233 5.180 82.443 71.049 1.00 49.77 C
ATOM 14 N9 A B1233 5.989 83.652 70.885 1.00 50.27 N
ATOM 15 C8 A B1233 7.346 83.749 70.716 1.00 50.83 C
ATOM 16 N7 A B1233 7.777 84.981 70.594 1.00 49.82 N
ATOM 17 C5 A B1233 6.627 85.745 70.679 1.00 48.77 C
ATOM 18 C6 A B1233 6.412 87.115 70.604 1.00 48.21 C
ATOM 19 N6 A B1233 7.385 87.998 70.405 1.00 46.43 N
ATOM 20 N1 A B1233 5.146 87.560 70.735 1.00 48.56 N
ATOM 21 C2 A B1233 4.168 86.669 70.918 1.00 49.16 C
ATOM 22 N3 A B1233 4.245 85.349 70.994 1.00 49.35 N
ATOM 23 C4 A B1233 5.519 84.944 70.866 1.00 49.34 C
ATOM 24 P C B1234 5.598 80.015 66.944 1.00 55.25 P
ATOM 25 OP1 C B1234 4.988 78.829 66.307 1.00 55.79 O
ATOM 26 OP2 C B1234 7.063 80.233 66.829 1.00 56.47 O
ATOM 27 O5' C B1234 4.822 81.341 66.513 1.00 55.17 O
TER
Atoms:
C2: (4.840,86.780,66.949)
OP1: (4.988,78.829,66.307)
OP2: (7.063,80.233,66.829)
C4: (7.086,86.337,67.289)
O5': (4.822,81.341,66.513)
C3': (3.410,83.401,64.901)
C1': (3.240,84.962,66.626)
O4': (3.113,83.657,67.180)
C5': (3.382,81.343,66.448)
P: (5.598,80.015,66.944)
O2: (3.880,87.561,66.825)
C4': (2.841,82.718,66.120)
C2': (3.034,84.852,65.120)
O2': (1.717,85.192,64.750)
N1: (4.605,85.418,66.861)
N3: (6.091,87.215,67.161)
N4: (8.307,86.807,67.530)
C6: (5.632,84.524,66.980)
C5: (6.874,84.937,67.189)
O3': (2.838,82.905,63.738)
OP1: (4.988,78.829,66.307)
OP2: (7.063,80.233,66.829)
C4: (7.086,86.337,67.289)
O5': (4.822,81.341,66.513)
C3': (3.410,83.401,64.901)
C1': (3.240,84.962,66.626)
O4': (3.113,83.657,67.180)
C5': (3.382,81.343,66.448)
P: (5.598,80.015,66.944)
O2: (3.880,87.561,66.825)
C4': (2.841,82.718,66.120)
C2': (3.034,84.852,65.120)
O2': (1.717,85.192,64.750)
N1: (4.605,85.418,66.861)
N3: (6.091,87.215,67.161)
N4: (8.307,86.807,67.530)
C6: (5.632,84.524,66.980)
C5: (6.874,84.937,67.189)
O3': (2.838,82.905,63.738)
OP1: (9.902,78.407,69.528)
OP2: (10.709,80.833,69.558)
C3': (5.702,80.893,69.375)
C1': (5.180,82.443,71.049)
C5': (7.332,79.556,70.828)
O4': (5.997,81.424,71.601)
C8: (7.346,83.749,70.716)
O2': (3.389,81.301,70.056)
C6: (6.412,87.115,70.604)
C5: (6.627,85.745,70.679)
C4: (5.519,84.944,70.866)
P: (9.891,79.759,70.153)
C4': (6.017,80.287,70.718)
C2': (4.626,81.904,69.736)
C2: (4.168,86.669,70.918)
N1: (5.146,87.560,70.735)
N3: (4.245,85.349,70.994)
N6: (7.385,87.998,70.405)
N7: (7.777,84.981,70.594)
N9: (5.989,83.652,70.885)
O5': (8.401,80.332,70.248)
O3': (5.249,79.895,68.493)
OP2: (10.709,80.833,69.558)
C3': (5.702,80.893,69.375)
C1': (5.180,82.443,71.049)
C5': (7.332,79.556,70.828)
O4': (5.997,81.424,71.601)
C8: (7.346,83.749,70.716)
O2': (3.389,81.301,70.056)
C6: (6.412,87.115,70.604)
C5: (6.627,85.745,70.679)
C4: (5.519,84.944,70.866)
P: (9.891,79.759,70.153)
C4': (6.017,80.287,70.718)
C2': (4.626,81.904,69.736)
C2: (4.168,86.669,70.918)
N1: (5.146,87.560,70.735)
N3: (4.245,85.349,70.994)
N6: (7.385,87.998,70.405)
N7: (7.777,84.981,70.594)
N9: (5.989,83.652,70.885)
O5': (8.401,80.332,70.248)
O3': (5.249,79.895,68.493)
Image (generated by PyMOL):