Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1526:A1525
Extra
PDB:
ATOM 1 O3' A A1525 19.518 -66.198 3.160 1.00 48.23 O
ATOM 2 P C A1526 19.181 -67.304 2.048 1.00 54.57 P
ATOM 3 OP1 C A1526 20.411 -67.493 1.235 1.00 54.57 O
ATOM 4 OP2 C A1526 17.922 -66.879 1.361 1.00 54.57 O
ATOM 5 O5' C A1526 18.905 -68.590 2.932 1.00 54.57 O
ATOM 6 C5' C A1526 17.640 -68.786 3.538 1.00 54.57 C
ATOM 7 C4' C A1526 17.593 -68.244 4.950 1.00 54.57 C
ATOM 8 O4' C A1526 17.590 -66.785 4.937 1.00 54.57 O
ATOM 9 C3' C A1526 16.334 -68.592 5.730 1.00 54.57 C
ATOM 10 O3' C A1526 16.370 -69.877 6.282 1.00 54.57 O
ATOM 11 C2' C A1526 16.277 -67.479 6.741 1.00 54.57 C
ATOM 12 O2' C A1526 17.335 -67.606 7.685 1.00 54.57 O
ATOM 13 C1' C A1526 16.585 -66.317 5.817 1.00 54.57 C
ATOM 14 N1 C A1526 15.406 -65.972 4.987 1.00 53.12 N
ATOM 15 C2 C A1526 14.075 -66.087 5.431 1.00 53.12 C
ATOM 16 O2 C A1526 13.805 -66.437 6.588 1.00 53.12 O
ATOM 17 N3 C A1526 13.083 -65.778 4.563 1.00 53.12 N
ATOM 18 C4 C A1526 13.362 -65.390 3.313 1.00 53.12 C
ATOM 19 N4 C A1526 12.372 -65.087 2.471 1.00 53.12 N
ATOM 20 C5 C A1526 14.694 -65.291 2.842 1.00 53.12 C
ATOM 21 C6 C A1526 15.666 -65.596 3.700 1.00 53.12 C
ATOM 22 P U A1527 16.079 -71.141 5.345 1.00 52.75 P
ATOM 23 OP1 U A1527 17.294 -71.996 5.374 1.00 52.75 O
ATOM 24 OP2 U A1527 15.590 -70.626 4.027 1.00 52.75 O
ATOM 25 O5' U A1527 14.894 -71.852 6.121 1.00 52.75 O
TER
ATOM 1 O3' C B1524 20.134 -61.201 -0.440 1.00 42.41 O
ATOM 2 P A B1525 19.655 -62.483 -1.284 1.00 48.23 P
ATOM 3 OP1 A B1525 20.330 -62.401 -2.612 1.00 48.23 O
ATOM 4 OP2 A B1525 18.160 -62.512 -1.231 1.00 48.23 O
ATOM 5 O5' A B1525 20.243 -63.696 -0.440 1.00 48.23 O
ATOM 6 C5' A B1525 19.424 -64.392 0.485 1.00 48.23 C
ATOM 7 C4' A B1525 19.833 -64.116 1.915 1.00 48.23 C
ATOM 8 O4' A B1525 19.582 -62.722 2.246 1.00 48.23 O
ATOM 9 C3' A B1525 19.055 -64.882 2.976 1.00 48.23 C
ATOM 10 O3' A B1525 19.518 -66.198 3.160 1.00 48.23 O
ATOM 11 C2' A B1525 19.186 -63.988 4.189 1.00 48.23 C
ATOM 12 O2' A B1525 20.501 -64.042 4.724 1.00 48.23 O
ATOM 13 C1' A B1525 18.986 -62.637 3.525 1.00 48.23 C
ATOM 14 N9 A B1525 17.553 -62.332 3.334 1.00 47.19 N
ATOM 15 C8 A B1525 16.953 -61.885 2.180 1.00 47.19 C
ATOM 16 N7 A B1525 15.667 -61.689 2.287 1.00 47.19 N
ATOM 17 C5 A B1525 15.394 -62.038 3.600 1.00 47.19 C
ATOM 18 C6 A B1525 14.200 -62.048 4.342 1.00 47.19 C
ATOM 19 N6 A B1525 13.022 -61.682 3.831 1.00 47.19 N
ATOM 20 N1 A B1525 14.257 -62.459 5.633 1.00 47.19 N
ATOM 21 C2 A B1525 15.443 -62.825 6.136 1.00 47.19 C
ATOM 22 N3 A B1525 16.631 -62.852 5.536 1.00 47.19 N
ATOM 23 C4 A B1525 16.541 -62.443 4.256 1.00 47.19 C
ATOM 24 P C B1526 19.181 -67.304 2.048 1.00 54.57 P
ATOM 25 OP1 C B1526 20.411 -67.493 1.235 1.00 54.57 O
ATOM 26 OP2 C B1526 17.922 -66.879 1.361 1.00 54.57 O
ATOM 27 O5' C B1526 18.905 -68.590 2.932 1.00 54.57 O
TER
ATOM 2 P C A1526 19.181 -67.304 2.048 1.00 54.57 P
ATOM 3 OP1 C A1526 20.411 -67.493 1.235 1.00 54.57 O
ATOM 4 OP2 C A1526 17.922 -66.879 1.361 1.00 54.57 O
ATOM 5 O5' C A1526 18.905 -68.590 2.932 1.00 54.57 O
ATOM 6 C5' C A1526 17.640 -68.786 3.538 1.00 54.57 C
ATOM 7 C4' C A1526 17.593 -68.244 4.950 1.00 54.57 C
ATOM 8 O4' C A1526 17.590 -66.785 4.937 1.00 54.57 O
ATOM 9 C3' C A1526 16.334 -68.592 5.730 1.00 54.57 C
ATOM 10 O3' C A1526 16.370 -69.877 6.282 1.00 54.57 O
ATOM 11 C2' C A1526 16.277 -67.479 6.741 1.00 54.57 C
ATOM 12 O2' C A1526 17.335 -67.606 7.685 1.00 54.57 O
ATOM 13 C1' C A1526 16.585 -66.317 5.817 1.00 54.57 C
ATOM 14 N1 C A1526 15.406 -65.972 4.987 1.00 53.12 N
ATOM 15 C2 C A1526 14.075 -66.087 5.431 1.00 53.12 C
ATOM 16 O2 C A1526 13.805 -66.437 6.588 1.00 53.12 O
ATOM 17 N3 C A1526 13.083 -65.778 4.563 1.00 53.12 N
ATOM 18 C4 C A1526 13.362 -65.390 3.313 1.00 53.12 C
ATOM 19 N4 C A1526 12.372 -65.087 2.471 1.00 53.12 N
ATOM 20 C5 C A1526 14.694 -65.291 2.842 1.00 53.12 C
ATOM 21 C6 C A1526 15.666 -65.596 3.700 1.00 53.12 C
ATOM 22 P U A1527 16.079 -71.141 5.345 1.00 52.75 P
ATOM 23 OP1 U A1527 17.294 -71.996 5.374 1.00 52.75 O
ATOM 24 OP2 U A1527 15.590 -70.626 4.027 1.00 52.75 O
ATOM 25 O5' U A1527 14.894 -71.852 6.121 1.00 52.75 O
TER
ATOM 1 O3' C B1524 20.134 -61.201 -0.440 1.00 42.41 O
ATOM 2 P A B1525 19.655 -62.483 -1.284 1.00 48.23 P
ATOM 3 OP1 A B1525 20.330 -62.401 -2.612 1.00 48.23 O
ATOM 4 OP2 A B1525 18.160 -62.512 -1.231 1.00 48.23 O
ATOM 5 O5' A B1525 20.243 -63.696 -0.440 1.00 48.23 O
ATOM 6 C5' A B1525 19.424 -64.392 0.485 1.00 48.23 C
ATOM 7 C4' A B1525 19.833 -64.116 1.915 1.00 48.23 C
ATOM 8 O4' A B1525 19.582 -62.722 2.246 1.00 48.23 O
ATOM 9 C3' A B1525 19.055 -64.882 2.976 1.00 48.23 C
ATOM 10 O3' A B1525 19.518 -66.198 3.160 1.00 48.23 O
ATOM 11 C2' A B1525 19.186 -63.988 4.189 1.00 48.23 C
ATOM 12 O2' A B1525 20.501 -64.042 4.724 1.00 48.23 O
ATOM 13 C1' A B1525 18.986 -62.637 3.525 1.00 48.23 C
ATOM 14 N9 A B1525 17.553 -62.332 3.334 1.00 47.19 N
ATOM 15 C8 A B1525 16.953 -61.885 2.180 1.00 47.19 C
ATOM 16 N7 A B1525 15.667 -61.689 2.287 1.00 47.19 N
ATOM 17 C5 A B1525 15.394 -62.038 3.600 1.00 47.19 C
ATOM 18 C6 A B1525 14.200 -62.048 4.342 1.00 47.19 C
ATOM 19 N6 A B1525 13.022 -61.682 3.831 1.00 47.19 N
ATOM 20 N1 A B1525 14.257 -62.459 5.633 1.00 47.19 N
ATOM 21 C2 A B1525 15.443 -62.825 6.136 1.00 47.19 C
ATOM 22 N3 A B1525 16.631 -62.852 5.536 1.00 47.19 N
ATOM 23 C4 A B1525 16.541 -62.443 4.256 1.00 47.19 C
ATOM 24 P C B1526 19.181 -67.304 2.048 1.00 54.57 P
ATOM 25 OP1 C B1526 20.411 -67.493 1.235 1.00 54.57 O
ATOM 26 OP2 C B1526 17.922 -66.879 1.361 1.00 54.57 O
ATOM 27 O5' C B1526 18.905 -68.590 2.932 1.00 54.57 O
TER
Atoms:
C2: (14.075,-66.087,5.431)
OP1: (20.411,-67.493,1.235)
OP2: (17.922,-66.879,1.361)
C4: (13.362,-65.390,3.313)
O5': (18.905,-68.590,2.932)
C3': (16.334,-68.592,5.730)
C1': (16.585,-66.317,5.817)
O4': (17.590,-66.785,4.937)
C5': (17.640,-68.786,3.538)
P: (19.181,-67.304,2.048)
O2: (13.805,-66.437,6.588)
C4': (17.593,-68.244,4.950)
C2': (16.277,-67.479,6.741)
O2': (17.335,-67.606,7.685)
N1: (15.406,-65.972,4.987)
N3: (13.083,-65.778,4.563)
N4: (12.372,-65.087,2.471)
C6: (15.666,-65.596,3.700)
C5: (14.694,-65.291,2.842)
O3': (16.370,-69.877,6.282)
OP1: (20.411,-67.493,1.235)
OP2: (17.922,-66.879,1.361)
C4: (13.362,-65.390,3.313)
O5': (18.905,-68.590,2.932)
C3': (16.334,-68.592,5.730)
C1': (16.585,-66.317,5.817)
O4': (17.590,-66.785,4.937)
C5': (17.640,-68.786,3.538)
P: (19.181,-67.304,2.048)
O2: (13.805,-66.437,6.588)
C4': (17.593,-68.244,4.950)
C2': (16.277,-67.479,6.741)
O2': (17.335,-67.606,7.685)
N1: (15.406,-65.972,4.987)
N3: (13.083,-65.778,4.563)
N4: (12.372,-65.087,2.471)
C6: (15.666,-65.596,3.700)
C5: (14.694,-65.291,2.842)
O3': (16.370,-69.877,6.282)
OP1: (20.330,-62.401,-2.612)
OP2: (18.160,-62.512,-1.231)
C3': (19.055,-64.882,2.976)
C1': (18.986,-62.637,3.525)
C5': (19.424,-64.392,0.485)
O4': (19.582,-62.722,2.246)
C8: (16.953,-61.885,2.180)
O2': (20.501,-64.042,4.724)
C6: (14.200,-62.048,4.342)
C5: (15.394,-62.038,3.600)
C4: (16.541,-62.443,4.256)
P: (19.655,-62.483,-1.284)
C4': (19.833,-64.116,1.915)
C2': (19.186,-63.988,4.189)
C2: (15.443,-62.825,6.136)
N1: (14.257,-62.459,5.633)
N3: (16.631,-62.852,5.536)
N6: (13.022,-61.682,3.831)
N7: (15.667,-61.689,2.287)
N9: (17.553,-62.332,3.334)
O5': (20.243,-63.696,-0.440)
O3': (19.518,-66.198,3.160)
OP2: (18.160,-62.512,-1.231)
C3': (19.055,-64.882,2.976)
C1': (18.986,-62.637,3.525)
C5': (19.424,-64.392,0.485)
O4': (19.582,-62.722,2.246)
C8: (16.953,-61.885,2.180)
O2': (20.501,-64.042,4.724)
C6: (14.200,-62.048,4.342)
C5: (15.394,-62.038,3.600)
C4: (16.541,-62.443,4.256)
P: (19.655,-62.483,-1.284)
C4': (19.833,-64.116,1.915)
C2': (19.186,-63.988,4.189)
C2: (15.443,-62.825,6.136)
N1: (14.257,-62.459,5.633)
N3: (16.631,-62.852,5.536)
N6: (13.022,-61.682,3.831)
N7: (15.667,-61.689,2.287)
N9: (17.553,-62.332,3.334)
O5': (20.243,-63.696,-0.440)
O3': (19.518,-66.198,3.160)
Image (generated by PyMOL):