Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1728:A1727
Extra
PDB:
ATOM 1 O3' A A1727 64.976 -13.209 -40.005 1.00 41.05 O
ATOM 2 P C A1728 65.296 -14.487 -40.928 1.00 48.21 P
ATOM 3 OP1 C A1728 66.736 -14.468 -41.272 1.00 56.25 O
ATOM 4 OP2 C A1728 64.302 -14.503 -42.024 1.00 51.40 O
ATOM 5 O5' C A1728 65.007 -15.739 -39.978 1.00 48.12 O
ATOM 6 C5' C A1728 65.727 -15.927 -38.756 1.00 44.93 C
ATOM 7 C4' C A1728 64.920 -16.759 -37.788 1.00 46.86 C
ATOM 8 O4' C A1728 63.744 -15.999 -37.397 1.00 41.98 O
ATOM 9 C3' C A1728 64.376 -18.079 -38.320 1.00 43.25 C
ATOM 10 O3' C A1728 65.284 -19.174 -38.211 1.00 40.78 O
ATOM 11 C2' C A1728 63.143 -18.295 -37.454 1.00 46.73 C
ATOM 12 O2' C A1728 63.419 -18.869 -36.201 1.00 46.69 O
ATOM 13 C1' C A1728 62.643 -16.869 -37.263 1.00 42.38 C
ATOM 14 N1 C A1728 61.668 -16.561 -38.320 1.00 43.91 N
ATOM 15 C2 C A1728 60.355 -17.007 -38.161 1.00 44.58 C
ATOM 16 O2 C A1728 60.043 -17.598 -37.121 1.00 51.02 O
ATOM 17 N3 C A1728 59.461 -16.790 -39.138 1.00 46.94 N
ATOM 18 C4 C A1728 59.828 -16.154 -40.249 1.00 46.25 C
ATOM 19 N4 C A1728 58.908 -15.988 -41.204 1.00 48.19 N
ATOM 20 C5 C A1728 61.152 -15.665 -40.431 1.00 44.49 C
ATOM 21 C6 C A1728 62.031 -15.885 -39.449 1.00 46.45 C
ATOM 22 P U A1729 64.897 -20.591 -38.869 1.00 50.33 P
ATOM 23 OP1 U A1729 65.841 -21.640 -38.392 1.00 44.78 O
ATOM 24 OP2 U A1729 64.676 -20.419 -40.324 1.00 44.18 O
ATOM 25 O5' U A1729 63.455 -20.903 -38.286 1.00 46.00 O
TER
ATOM 1 O3' A B1726 60.486 -10.233 -43.557 1.00 54.92 O
ATOM 2 P A B1727 61.287 -11.631 -43.741 1.00 52.51 P
ATOM 3 OP1 A B1727 62.391 -11.306 -44.689 1.00 45.81 O
ATOM 4 OP2 A B1727 60.356 -12.757 -44.039 1.00 45.73 O
ATOM 5 O5' A B1727 61.959 -11.930 -42.327 1.00 39.87 O
ATOM 6 C5' A B1727 63.245 -11.401 -42.024 1.00 42.16 C
ATOM 7 C4' A B1727 63.482 -11.395 -40.540 1.00 44.87 C
ATOM 8 O4' A B1727 62.336 -10.805 -39.878 1.00 48.83 O
ATOM 9 C3' A B1727 63.640 -12.752 -39.884 1.00 44.34 C
ATOM 10 O3' A B1727 64.976 -13.209 -40.005 1.00 41.05 O
ATOM 11 C2' A B1727 63.254 -12.456 -38.439 1.00 49.35 C
ATOM 12 O2' A B1727 64.296 -11.854 -37.696 1.00 49.45 O
ATOM 13 C1' A B1727 62.136 -11.431 -38.625 1.00 49.67 C
ATOM 14 N9 A B1727 60.817 -12.064 -38.620 1.00 45.31 N
ATOM 15 C8 A B1727 60.051 -12.471 -39.690 1.00 46.75 C
ATOM 16 N7 A B1727 58.908 -13.019 -39.346 1.00 46.29 N
ATOM 17 C5 A B1727 58.920 -12.971 -37.962 1.00 47.82 C
ATOM 18 C6 A B1727 57.992 -13.386 -36.994 1.00 48.08 C
ATOM 19 N6 A B1727 56.815 -13.957 -37.290 1.00 48.93 N
ATOM 20 N1 A B1727 58.311 -13.186 -35.693 1.00 46.34 N
ATOM 21 C2 A B1727 59.486 -12.601 -35.399 1.00 42.98 C
ATOM 22 N3 A B1727 60.436 -12.165 -36.220 1.00 44.99 N
ATOM 23 C4 A B1727 60.090 -12.382 -37.501 1.00 47.06 C
ATOM 24 P C B1728 65.296 -14.487 -40.928 1.00 48.21 P
ATOM 25 OP1 C B1728 66.736 -14.468 -41.272 1.00 56.25 O
ATOM 26 OP2 C B1728 64.302 -14.503 -42.024 1.00 51.40 O
ATOM 27 O5' C B1728 65.007 -15.739 -39.978 1.00 48.12 O
TER
ATOM 2 P C A1728 65.296 -14.487 -40.928 1.00 48.21 P
ATOM 3 OP1 C A1728 66.736 -14.468 -41.272 1.00 56.25 O
ATOM 4 OP2 C A1728 64.302 -14.503 -42.024 1.00 51.40 O
ATOM 5 O5' C A1728 65.007 -15.739 -39.978 1.00 48.12 O
ATOM 6 C5' C A1728 65.727 -15.927 -38.756 1.00 44.93 C
ATOM 7 C4' C A1728 64.920 -16.759 -37.788 1.00 46.86 C
ATOM 8 O4' C A1728 63.744 -15.999 -37.397 1.00 41.98 O
ATOM 9 C3' C A1728 64.376 -18.079 -38.320 1.00 43.25 C
ATOM 10 O3' C A1728 65.284 -19.174 -38.211 1.00 40.78 O
ATOM 11 C2' C A1728 63.143 -18.295 -37.454 1.00 46.73 C
ATOM 12 O2' C A1728 63.419 -18.869 -36.201 1.00 46.69 O
ATOM 13 C1' C A1728 62.643 -16.869 -37.263 1.00 42.38 C
ATOM 14 N1 C A1728 61.668 -16.561 -38.320 1.00 43.91 N
ATOM 15 C2 C A1728 60.355 -17.007 -38.161 1.00 44.58 C
ATOM 16 O2 C A1728 60.043 -17.598 -37.121 1.00 51.02 O
ATOM 17 N3 C A1728 59.461 -16.790 -39.138 1.00 46.94 N
ATOM 18 C4 C A1728 59.828 -16.154 -40.249 1.00 46.25 C
ATOM 19 N4 C A1728 58.908 -15.988 -41.204 1.00 48.19 N
ATOM 20 C5 C A1728 61.152 -15.665 -40.431 1.00 44.49 C
ATOM 21 C6 C A1728 62.031 -15.885 -39.449 1.00 46.45 C
ATOM 22 P U A1729 64.897 -20.591 -38.869 1.00 50.33 P
ATOM 23 OP1 U A1729 65.841 -21.640 -38.392 1.00 44.78 O
ATOM 24 OP2 U A1729 64.676 -20.419 -40.324 1.00 44.18 O
ATOM 25 O5' U A1729 63.455 -20.903 -38.286 1.00 46.00 O
TER
ATOM 1 O3' A B1726 60.486 -10.233 -43.557 1.00 54.92 O
ATOM 2 P A B1727 61.287 -11.631 -43.741 1.00 52.51 P
ATOM 3 OP1 A B1727 62.391 -11.306 -44.689 1.00 45.81 O
ATOM 4 OP2 A B1727 60.356 -12.757 -44.039 1.00 45.73 O
ATOM 5 O5' A B1727 61.959 -11.930 -42.327 1.00 39.87 O
ATOM 6 C5' A B1727 63.245 -11.401 -42.024 1.00 42.16 C
ATOM 7 C4' A B1727 63.482 -11.395 -40.540 1.00 44.87 C
ATOM 8 O4' A B1727 62.336 -10.805 -39.878 1.00 48.83 O
ATOM 9 C3' A B1727 63.640 -12.752 -39.884 1.00 44.34 C
ATOM 10 O3' A B1727 64.976 -13.209 -40.005 1.00 41.05 O
ATOM 11 C2' A B1727 63.254 -12.456 -38.439 1.00 49.35 C
ATOM 12 O2' A B1727 64.296 -11.854 -37.696 1.00 49.45 O
ATOM 13 C1' A B1727 62.136 -11.431 -38.625 1.00 49.67 C
ATOM 14 N9 A B1727 60.817 -12.064 -38.620 1.00 45.31 N
ATOM 15 C8 A B1727 60.051 -12.471 -39.690 1.00 46.75 C
ATOM 16 N7 A B1727 58.908 -13.019 -39.346 1.00 46.29 N
ATOM 17 C5 A B1727 58.920 -12.971 -37.962 1.00 47.82 C
ATOM 18 C6 A B1727 57.992 -13.386 -36.994 1.00 48.08 C
ATOM 19 N6 A B1727 56.815 -13.957 -37.290 1.00 48.93 N
ATOM 20 N1 A B1727 58.311 -13.186 -35.693 1.00 46.34 N
ATOM 21 C2 A B1727 59.486 -12.601 -35.399 1.00 42.98 C
ATOM 22 N3 A B1727 60.436 -12.165 -36.220 1.00 44.99 N
ATOM 23 C4 A B1727 60.090 -12.382 -37.501 1.00 47.06 C
ATOM 24 P C B1728 65.296 -14.487 -40.928 1.00 48.21 P
ATOM 25 OP1 C B1728 66.736 -14.468 -41.272 1.00 56.25 O
ATOM 26 OP2 C B1728 64.302 -14.503 -42.024 1.00 51.40 O
ATOM 27 O5' C B1728 65.007 -15.739 -39.978 1.00 48.12 O
TER
Atoms:
C2: (60.355,-17.007,-38.161)
OP1: (66.736,-14.468,-41.272)
OP2: (64.302,-14.503,-42.024)
C4: (59.828,-16.154,-40.249)
O5': (65.007,-15.739,-39.978)
C3': (64.376,-18.079,-38.320)
C1': (62.643,-16.869,-37.263)
O4': (63.744,-15.999,-37.397)
C5': (65.727,-15.927,-38.756)
P: (65.296,-14.487,-40.928)
O2: (60.043,-17.598,-37.121)
C4': (64.920,-16.759,-37.788)
C2': (63.143,-18.295,-37.454)
O2': (63.419,-18.869,-36.201)
N1: (61.668,-16.561,-38.320)
N3: (59.461,-16.790,-39.138)
N4: (58.908,-15.988,-41.204)
C6: (62.031,-15.885,-39.449)
C5: (61.152,-15.665,-40.431)
O3': (65.284,-19.174,-38.211)
OP1: (66.736,-14.468,-41.272)
OP2: (64.302,-14.503,-42.024)
C4: (59.828,-16.154,-40.249)
O5': (65.007,-15.739,-39.978)
C3': (64.376,-18.079,-38.320)
C1': (62.643,-16.869,-37.263)
O4': (63.744,-15.999,-37.397)
C5': (65.727,-15.927,-38.756)
P: (65.296,-14.487,-40.928)
O2: (60.043,-17.598,-37.121)
C4': (64.920,-16.759,-37.788)
C2': (63.143,-18.295,-37.454)
O2': (63.419,-18.869,-36.201)
N1: (61.668,-16.561,-38.320)
N3: (59.461,-16.790,-39.138)
N4: (58.908,-15.988,-41.204)
C6: (62.031,-15.885,-39.449)
C5: (61.152,-15.665,-40.431)
O3': (65.284,-19.174,-38.211)
OP1: (62.391,-11.306,-44.689)
OP2: (60.356,-12.757,-44.039)
C3': (63.640,-12.752,-39.884)
C1': (62.136,-11.431,-38.625)
C5': (63.245,-11.401,-42.024)
O4': (62.336,-10.805,-39.878)
C8: (60.051,-12.471,-39.690)
O2': (64.296,-11.854,-37.696)
C6: (57.992,-13.386,-36.994)
C5: (58.920,-12.971,-37.962)
C4: (60.090,-12.382,-37.501)
P: (61.287,-11.631,-43.741)
C4': (63.482,-11.395,-40.540)
C2': (63.254,-12.456,-38.439)
C2: (59.486,-12.601,-35.399)
N1: (58.311,-13.186,-35.693)
N3: (60.436,-12.165,-36.220)
N6: (56.815,-13.957,-37.290)
N7: (58.908,-13.019,-39.346)
N9: (60.817,-12.064,-38.620)
O5': (61.959,-11.930,-42.327)
O3': (64.976,-13.209,-40.005)
OP2: (60.356,-12.757,-44.039)
C3': (63.640,-12.752,-39.884)
C1': (62.136,-11.431,-38.625)
C5': (63.245,-11.401,-42.024)
O4': (62.336,-10.805,-39.878)
C8: (60.051,-12.471,-39.690)
O2': (64.296,-11.854,-37.696)
C6: (57.992,-13.386,-36.994)
C5: (58.920,-12.971,-37.962)
C4: (60.090,-12.382,-37.501)
P: (61.287,-11.631,-43.741)
C4': (63.482,-11.395,-40.540)
C2': (63.254,-12.456,-38.439)
C2: (59.486,-12.601,-35.399)
N1: (58.311,-13.186,-35.693)
N3: (60.436,-12.165,-36.220)
N6: (56.815,-13.957,-37.290)
N7: (58.908,-13.019,-39.346)
N9: (60.817,-12.064,-38.620)
O5': (61.959,-11.930,-42.327)
O3': (64.976,-13.209,-40.005)
Image (generated by PyMOL):