Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:01234:01233
Extra
PDB:
ATOM 1 O3' A A1233 4.940 80.007 68.519 1.00 44.75 O
ATOM 2 P C A1234 5.268 80.245 66.971 1.00 46.92 P
ATOM 3 OP1 C A1234 4.687 79.131 66.194 1.00 45.63 O
ATOM 4 OP2 C A1234 6.723 80.523 66.873 1.00 48.02 O
ATOM 5 O5' C A1234 4.466 81.576 66.614 1.00 46.63 O
ATOM 6 C5' C A1234 3.036 81.600 66.660 1.00 46.58 C
ATOM 7 C4' C A1234 2.515 82.976 66.326 1.00 49.49 C
ATOM 8 O4' C A1234 2.886 83.918 67.359 1.00 51.90 O
ATOM 9 C3' C A1234 3.063 83.615 65.071 1.00 51.02 C
ATOM 10 O3' C A1234 2.462 83.108 63.905 1.00 51.99 O
ATOM 11 C2' C A1234 2.747 85.084 65.298 1.00 52.49 C
ATOM 12 O2' C A1234 1.401 85.425 65.050 1.00 53.57 O
ATOM 13 C1' C A1234 3.032 85.213 66.793 1.00 53.44 C
ATOM 14 N1 C A1234 4.401 85.704 67.049 1.00 55.90 N
ATOM 15 C2 C A1234 4.619 87.091 67.101 1.00 56.28 C
ATOM 16 O2 C A1234 3.656 87.864 66.974 1.00 57.28 O
ATOM 17 N3 C A1234 5.869 87.553 67.290 1.00 57.30 N
ATOM 18 C4 C A1234 6.881 86.701 67.433 1.00 57.50 C
ATOM 19 N4 C A1234 8.100 87.216 67.602 1.00 58.77 N
ATOM 20 C5 C A1234 6.690 85.287 67.406 1.00 57.14 C
ATOM 21 C6 C A1234 5.447 84.836 67.214 1.00 55.76 C
ATOM 22 P U A1235 3.370 82.840 62.619 1.00 54.93 P
ATOM 23 OP1 U A1235 2.480 82.361 61.530 1.00 54.64 O
ATOM 24 OP2 U A1235 4.509 81.996 63.065 1.00 51.67 O
ATOM 25 O5' U A1235 3.892 84.298 62.233 1.00 55.55 O
TER
ATOM 1 O3' C B1232 10.208 79.700 71.605 1.00 50.67 O
ATOM 2 P A B1233 9.666 79.816 70.102 1.00 50.47 P
ATOM 3 OP1 A B1233 9.622 78.421 69.602 1.00 51.48 O
ATOM 4 OP2 A B1233 10.451 80.829 69.367 1.00 51.68 O
ATOM 5 O5' A B1233 8.186 80.385 70.271 1.00 48.77 O
ATOM 6 C5' A B1233 7.140 79.563 70.828 1.00 45.53 C
ATOM 7 C4' A B1233 5.812 80.283 70.789 1.00 44.54 C
ATOM 8 O4' A B1233 5.823 81.398 71.714 1.00 44.90 O
ATOM 9 C3' A B1233 5.424 80.928 69.473 1.00 44.63 C
ATOM 10 O3' A B1233 4.940 80.007 68.519 1.00 44.75 O
ATOM 11 C2' A B1233 4.373 81.932 69.914 1.00 44.71 C
ATOM 12 O2' A B1233 3.121 81.351 70.200 1.00 43.07 O
ATOM 13 C1' A B1233 4.996 82.440 71.213 1.00 46.98 C
ATOM 14 N9 A B1233 5.817 83.637 70.992 1.00 50.85 N
ATOM 15 C8 A B1233 7.176 83.739 70.786 1.00 51.66 C
ATOM 16 N7 A B1233 7.593 84.971 70.607 1.00 51.75 N
ATOM 17 C5 A B1233 6.434 85.731 70.705 1.00 52.01 C
ATOM 18 C6 A B1233 6.196 87.112 70.613 1.00 51.82 C
ATOM 19 N6 A B1233 7.146 88.017 70.392 1.00 53.06 N
ATOM 20 N1 A B1233 4.926 87.540 70.757 1.00 53.03 N
ATOM 21 C2 A B1233 3.966 86.638 70.979 1.00 52.88 C
ATOM 22 N3 A B1233 4.061 85.319 71.089 1.00 52.30 N
ATOM 23 C4 A B1233 5.336 84.923 70.941 1.00 51.71 C
ATOM 24 P C B1234 5.268 80.245 66.971 1.00 46.92 P
ATOM 25 OP1 C B1234 4.687 79.131 66.194 1.00 45.63 O
ATOM 26 OP2 C B1234 6.723 80.523 66.873 1.00 48.02 O
ATOM 27 O5' C B1234 4.466 81.576 66.614 1.00 46.63 O
TER
ATOM 2 P C A1234 5.268 80.245 66.971 1.00 46.92 P
ATOM 3 OP1 C A1234 4.687 79.131 66.194 1.00 45.63 O
ATOM 4 OP2 C A1234 6.723 80.523 66.873 1.00 48.02 O
ATOM 5 O5' C A1234 4.466 81.576 66.614 1.00 46.63 O
ATOM 6 C5' C A1234 3.036 81.600 66.660 1.00 46.58 C
ATOM 7 C4' C A1234 2.515 82.976 66.326 1.00 49.49 C
ATOM 8 O4' C A1234 2.886 83.918 67.359 1.00 51.90 O
ATOM 9 C3' C A1234 3.063 83.615 65.071 1.00 51.02 C
ATOM 10 O3' C A1234 2.462 83.108 63.905 1.00 51.99 O
ATOM 11 C2' C A1234 2.747 85.084 65.298 1.00 52.49 C
ATOM 12 O2' C A1234 1.401 85.425 65.050 1.00 53.57 O
ATOM 13 C1' C A1234 3.032 85.213 66.793 1.00 53.44 C
ATOM 14 N1 C A1234 4.401 85.704 67.049 1.00 55.90 N
ATOM 15 C2 C A1234 4.619 87.091 67.101 1.00 56.28 C
ATOM 16 O2 C A1234 3.656 87.864 66.974 1.00 57.28 O
ATOM 17 N3 C A1234 5.869 87.553 67.290 1.00 57.30 N
ATOM 18 C4 C A1234 6.881 86.701 67.433 1.00 57.50 C
ATOM 19 N4 C A1234 8.100 87.216 67.602 1.00 58.77 N
ATOM 20 C5 C A1234 6.690 85.287 67.406 1.00 57.14 C
ATOM 21 C6 C A1234 5.447 84.836 67.214 1.00 55.76 C
ATOM 22 P U A1235 3.370 82.840 62.619 1.00 54.93 P
ATOM 23 OP1 U A1235 2.480 82.361 61.530 1.00 54.64 O
ATOM 24 OP2 U A1235 4.509 81.996 63.065 1.00 51.67 O
ATOM 25 O5' U A1235 3.892 84.298 62.233 1.00 55.55 O
TER
ATOM 1 O3' C B1232 10.208 79.700 71.605 1.00 50.67 O
ATOM 2 P A B1233 9.666 79.816 70.102 1.00 50.47 P
ATOM 3 OP1 A B1233 9.622 78.421 69.602 1.00 51.48 O
ATOM 4 OP2 A B1233 10.451 80.829 69.367 1.00 51.68 O
ATOM 5 O5' A B1233 8.186 80.385 70.271 1.00 48.77 O
ATOM 6 C5' A B1233 7.140 79.563 70.828 1.00 45.53 C
ATOM 7 C4' A B1233 5.812 80.283 70.789 1.00 44.54 C
ATOM 8 O4' A B1233 5.823 81.398 71.714 1.00 44.90 O
ATOM 9 C3' A B1233 5.424 80.928 69.473 1.00 44.63 C
ATOM 10 O3' A B1233 4.940 80.007 68.519 1.00 44.75 O
ATOM 11 C2' A B1233 4.373 81.932 69.914 1.00 44.71 C
ATOM 12 O2' A B1233 3.121 81.351 70.200 1.00 43.07 O
ATOM 13 C1' A B1233 4.996 82.440 71.213 1.00 46.98 C
ATOM 14 N9 A B1233 5.817 83.637 70.992 1.00 50.85 N
ATOM 15 C8 A B1233 7.176 83.739 70.786 1.00 51.66 C
ATOM 16 N7 A B1233 7.593 84.971 70.607 1.00 51.75 N
ATOM 17 C5 A B1233 6.434 85.731 70.705 1.00 52.01 C
ATOM 18 C6 A B1233 6.196 87.112 70.613 1.00 51.82 C
ATOM 19 N6 A B1233 7.146 88.017 70.392 1.00 53.06 N
ATOM 20 N1 A B1233 4.926 87.540 70.757 1.00 53.03 N
ATOM 21 C2 A B1233 3.966 86.638 70.979 1.00 52.88 C
ATOM 22 N3 A B1233 4.061 85.319 71.089 1.00 52.30 N
ATOM 23 C4 A B1233 5.336 84.923 70.941 1.00 51.71 C
ATOM 24 P C B1234 5.268 80.245 66.971 1.00 46.92 P
ATOM 25 OP1 C B1234 4.687 79.131 66.194 1.00 45.63 O
ATOM 26 OP2 C B1234 6.723 80.523 66.873 1.00 48.02 O
ATOM 27 O5' C B1234 4.466 81.576 66.614 1.00 46.63 O
TER
Atoms:
C2: (4.619,87.091,67.101)
OP1: (4.687,79.131,66.194)
OP2: (6.723,80.523,66.873)
C4: (6.881,86.701,67.433)
O5': (4.466,81.576,66.614)
C3': (3.063,83.615,65.071)
C1': (3.032,85.213,66.793)
O4': (2.886,83.918,67.359)
C5': (3.036,81.600,66.660)
P: (5.268,80.245,66.971)
O2: (3.656,87.864,66.974)
C4': (2.515,82.976,66.326)
C2': (2.747,85.084,65.298)
O2': (1.401,85.425,65.050)
N1: (4.401,85.704,67.049)
N3: (5.869,87.553,67.290)
N4: (8.100,87.216,67.602)
C6: (5.447,84.836,67.214)
C5: (6.690,85.287,67.406)
O3': (2.462,83.108,63.905)
OP1: (4.687,79.131,66.194)
OP2: (6.723,80.523,66.873)
C4: (6.881,86.701,67.433)
O5': (4.466,81.576,66.614)
C3': (3.063,83.615,65.071)
C1': (3.032,85.213,66.793)
O4': (2.886,83.918,67.359)
C5': (3.036,81.600,66.660)
P: (5.268,80.245,66.971)
O2: (3.656,87.864,66.974)
C4': (2.515,82.976,66.326)
C2': (2.747,85.084,65.298)
O2': (1.401,85.425,65.050)
N1: (4.401,85.704,67.049)
N3: (5.869,87.553,67.290)
N4: (8.100,87.216,67.602)
C6: (5.447,84.836,67.214)
C5: (6.690,85.287,67.406)
O3': (2.462,83.108,63.905)
OP1: (9.622,78.421,69.602)
OP2: (10.451,80.829,69.367)
C3': (5.424,80.928,69.473)
C1': (4.996,82.440,71.213)
C5': (7.140,79.563,70.828)
O4': (5.823,81.398,71.714)
C8: (7.176,83.739,70.786)
O2': (3.121,81.351,70.200)
C6: (6.196,87.112,70.613)
C5: (6.434,85.731,70.705)
C4: (5.336,84.923,70.941)
P: (9.666,79.816,70.102)
C4': (5.812,80.283,70.789)
C2': (4.373,81.932,69.914)
C2: (3.966,86.638,70.979)
N1: (4.926,87.540,70.757)
N3: (4.061,85.319,71.089)
N6: (7.146,88.017,70.392)
N7: (7.593,84.971,70.607)
N9: (5.817,83.637,70.992)
O5': (8.186,80.385,70.271)
O3': (4.940,80.007,68.519)
OP2: (10.451,80.829,69.367)
C3': (5.424,80.928,69.473)
C1': (4.996,82.440,71.213)
C5': (7.140,79.563,70.828)
O4': (5.823,81.398,71.714)
C8: (7.176,83.739,70.786)
O2': (3.121,81.351,70.200)
C6: (6.196,87.112,70.613)
C5: (6.434,85.731,70.705)
C4: (5.336,84.923,70.941)
P: (9.666,79.816,70.102)
C4': (5.812,80.283,70.789)
C2': (4.373,81.932,69.914)
C2: (3.966,86.638,70.979)
N1: (4.926,87.540,70.757)
N3: (4.061,85.319,71.089)
N6: (7.146,88.017,70.392)
N7: (7.593,84.971,70.607)
N9: (5.817,83.637,70.992)
O5': (8.186,80.385,70.271)
O3': (4.940,80.007,68.519)
Image (generated by PyMOL):