Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3G9C:P4:P3
Extra
PDB:
ATOM 1 O3' A A 3 11.037 2.111 12.587 1.00 55.68 O
ATOM 2 P C A 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 3 OP1 C A 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 4 OP2 C A 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 5 O5' C A 4 10.744 3.414 10.484 1.00 55.23 O
ATOM 6 C5' C A 4 12.029 3.262 9.880 1.00 54.23 C
ATOM 7 C4' C A 4 11.900 2.873 8.418 1.00 53.61 C
ATOM 8 O4' C A 4 11.106 1.665 8.308 1.00 53.54 O
ATOM 9 C3' C A 4 11.142 3.849 7.532 1.00 53.49 C
ATOM 10 O3' C A 4 11.947 4.962 7.144 1.00 53.41 O
ATOM 11 C2' C A 4 10.781 2.948 6.353 1.00 53.29 C
ATOM 12 O2' C A 4 11.856 2.743 5.455 1.00 53.45 O
ATOM 13 C1' C A 4 10.414 1.649 7.069 1.00 52.87 C
ATOM 14 N1 C A 4 8.933 1.500 7.300 1.00 51.99 N
ATOM 15 C2 C A 4 8.075 1.114 6.249 1.00 51.89 C
ATOM 16 O2 C A 4 8.528 0.885 5.119 1.00 51.95 O
ATOM 17 N3 C A 4 6.743 0.999 6.496 1.00 51.53 N
ATOM 18 C4 C A 4 6.260 1.246 7.716 1.00 51.24 C
ATOM 19 N4 C A 4 4.946 1.114 7.909 1.00 51.06 N
ATOM 20 C5 C A 4 7.106 1.638 8.795 1.00 51.53 C
ATOM 21 C6 C A 4 8.416 1.750 8.542 1.00 51.75 C
ATOM 22 P C A 5 11.269 6.391 6.873 1.00 53.00 P
ATOM 23 OP1 C A 5 12.357 7.324 6.505 1.00 53.22 O
ATOM 24 OP2 C A 5 10.395 6.714 8.025 1.00 52.91 O
ATOM 25 O5' C A 5 10.354 6.152 5.578 1.00 52.01 O
TER
ATOM 1 O3' C B 2 7.363 -0.836 16.619 1.00 56.29 O
ATOM 2 P A B 3 7.306 0.666 16.071 1.00 56.50 P
ATOM 3 OP1 A B 3 7.949 1.545 17.075 1.00 56.44 O
ATOM 4 OP2 A B 3 5.921 0.939 15.622 1.00 56.01 O
ATOM 5 O5' A B 3 8.256 0.615 14.780 1.00 56.63 O
ATOM 6 C5' A B 3 9.669 0.440 14.912 1.00 56.23 C
ATOM 7 C4' A B 3 10.316 0.019 13.601 1.00 55.92 C
ATOM 8 O4' A B 3 9.713 -1.199 13.089 1.00 55.72 O
ATOM 9 C3' A B 3 10.163 0.989 12.440 1.00 55.80 C
ATOM 10 O3' A B 3 11.037 2.111 12.587 1.00 55.68 O
ATOM 11 C2' A B 3 10.517 0.076 11.263 1.00 55.65 C
ATOM 12 O2' A B 3 11.907 -0.148 11.100 1.00 55.75 O
ATOM 13 C1' A B 3 9.823 -1.223 11.674 1.00 55.09 C
ATOM 14 N9 A B 3 8.493 -1.380 11.083 1.00 54.06 N
ATOM 15 C8 A B 3 7.286 -1.238 11.715 1.00 53.79 C
ATOM 16 N7 A B 3 6.247 -1.433 10.934 1.00 53.42 N
ATOM 17 C5 A B 3 6.809 -1.721 9.703 1.00 53.27 C
ATOM 18 C6 A B 3 6.243 -2.026 8.444 1.00 53.33 C
ATOM 19 N6 A B 3 4.923 -2.089 8.231 1.00 53.17 N
ATOM 20 N1 A B 3 7.086 -2.262 7.410 1.00 53.16 N
ATOM 21 C2 A B 3 8.408 -2.196 7.628 1.00 52.97 C
ATOM 22 N3 A B 3 9.053 -1.920 8.766 1.00 52.98 N
ATOM 23 C4 A B 3 8.193 -1.691 9.774 1.00 53.32 C
ATOM 24 P C B 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 25 OP1 C B 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 26 OP2 C B 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 27 O5' C B 4 10.744 3.414 10.484 1.00 55.23 O
TER
ATOM 2 P C A 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 3 OP1 C A 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 4 OP2 C A 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 5 O5' C A 4 10.744 3.414 10.484 1.00 55.23 O
ATOM 6 C5' C A 4 12.029 3.262 9.880 1.00 54.23 C
ATOM 7 C4' C A 4 11.900 2.873 8.418 1.00 53.61 C
ATOM 8 O4' C A 4 11.106 1.665 8.308 1.00 53.54 O
ATOM 9 C3' C A 4 11.142 3.849 7.532 1.00 53.49 C
ATOM 10 O3' C A 4 11.947 4.962 7.144 1.00 53.41 O
ATOM 11 C2' C A 4 10.781 2.948 6.353 1.00 53.29 C
ATOM 12 O2' C A 4 11.856 2.743 5.455 1.00 53.45 O
ATOM 13 C1' C A 4 10.414 1.649 7.069 1.00 52.87 C
ATOM 14 N1 C A 4 8.933 1.500 7.300 1.00 51.99 N
ATOM 15 C2 C A 4 8.075 1.114 6.249 1.00 51.89 C
ATOM 16 O2 C A 4 8.528 0.885 5.119 1.00 51.95 O
ATOM 17 N3 C A 4 6.743 0.999 6.496 1.00 51.53 N
ATOM 18 C4 C A 4 6.260 1.246 7.716 1.00 51.24 C
ATOM 19 N4 C A 4 4.946 1.114 7.909 1.00 51.06 N
ATOM 20 C5 C A 4 7.106 1.638 8.795 1.00 51.53 C
ATOM 21 C6 C A 4 8.416 1.750 8.542 1.00 51.75 C
ATOM 22 P C A 5 11.269 6.391 6.873 1.00 53.00 P
ATOM 23 OP1 C A 5 12.357 7.324 6.505 1.00 53.22 O
ATOM 24 OP2 C A 5 10.395 6.714 8.025 1.00 52.91 O
ATOM 25 O5' C A 5 10.354 6.152 5.578 1.00 52.01 O
TER
ATOM 1 O3' C B 2 7.363 -0.836 16.619 1.00 56.29 O
ATOM 2 P A B 3 7.306 0.666 16.071 1.00 56.50 P
ATOM 3 OP1 A B 3 7.949 1.545 17.075 1.00 56.44 O
ATOM 4 OP2 A B 3 5.921 0.939 15.622 1.00 56.01 O
ATOM 5 O5' A B 3 8.256 0.615 14.780 1.00 56.63 O
ATOM 6 C5' A B 3 9.669 0.440 14.912 1.00 56.23 C
ATOM 7 C4' A B 3 10.316 0.019 13.601 1.00 55.92 C
ATOM 8 O4' A B 3 9.713 -1.199 13.089 1.00 55.72 O
ATOM 9 C3' A B 3 10.163 0.989 12.440 1.00 55.80 C
ATOM 10 O3' A B 3 11.037 2.111 12.587 1.00 55.68 O
ATOM 11 C2' A B 3 10.517 0.076 11.263 1.00 55.65 C
ATOM 12 O2' A B 3 11.907 -0.148 11.100 1.00 55.75 O
ATOM 13 C1' A B 3 9.823 -1.223 11.674 1.00 55.09 C
ATOM 14 N9 A B 3 8.493 -1.380 11.083 1.00 54.06 N
ATOM 15 C8 A B 3 7.286 -1.238 11.715 1.00 53.79 C
ATOM 16 N7 A B 3 6.247 -1.433 10.934 1.00 53.42 N
ATOM 17 C5 A B 3 6.809 -1.721 9.703 1.00 53.27 C
ATOM 18 C6 A B 3 6.243 -2.026 8.444 1.00 53.33 C
ATOM 19 N6 A B 3 4.923 -2.089 8.231 1.00 53.17 N
ATOM 20 N1 A B 3 7.086 -2.262 7.410 1.00 53.16 N
ATOM 21 C2 A B 3 8.408 -2.196 7.628 1.00 52.97 C
ATOM 22 N3 A B 3 9.053 -1.920 8.766 1.00 52.98 N
ATOM 23 C4 A B 3 8.193 -1.691 9.774 1.00 53.32 C
ATOM 24 P C B 4 10.588 3.564 12.070 1.00 55.56 P
ATOM 25 OP1 C B 4 11.594 4.544 12.538 1.00 55.59 O
ATOM 26 OP2 C B 4 9.157 3.780 12.394 1.00 54.86 O
ATOM 27 O5' C B 4 10.744 3.414 10.484 1.00 55.23 O
TER
Atoms:
C2: (8.075,1.114,6.249)
OP1: (11.594,4.544,12.538)
OP2: (9.157,3.780,12.394)
C4: (6.260,1.246,7.716)
O5': (10.744,3.414,10.484)
C3': (11.142,3.849,7.532)
C1': (10.414,1.649,7.069)
O4': (11.106,1.665,8.308)
C5': (12.029,3.262,9.880)
P: (10.588,3.564,12.070)
O2: (8.528,0.885,5.119)
C4': (11.900,2.873,8.418)
C2': (10.781,2.948,6.353)
O2': (11.856,2.743,5.455)
N1: (8.933,1.500,7.300)
N3: (6.743,0.999,6.496)
N4: (4.946,1.114,7.909)
C6: (8.416,1.750,8.542)
C5: (7.106,1.638,8.795)
O3': (11.947,4.962,7.144)
OP1: (11.594,4.544,12.538)
OP2: (9.157,3.780,12.394)
C4: (6.260,1.246,7.716)
O5': (10.744,3.414,10.484)
C3': (11.142,3.849,7.532)
C1': (10.414,1.649,7.069)
O4': (11.106,1.665,8.308)
C5': (12.029,3.262,9.880)
P: (10.588,3.564,12.070)
O2: (8.528,0.885,5.119)
C4': (11.900,2.873,8.418)
C2': (10.781,2.948,6.353)
O2': (11.856,2.743,5.455)
N1: (8.933,1.500,7.300)
N3: (6.743,0.999,6.496)
N4: (4.946,1.114,7.909)
C6: (8.416,1.750,8.542)
C5: (7.106,1.638,8.795)
O3': (11.947,4.962,7.144)
OP1: (7.949,1.545,17.075)
OP2: (5.921,0.939,15.622)
C3': (10.163,0.989,12.440)
C1': (9.823,-1.223,11.674)
C5': (9.669,0.440,14.912)
O4': (9.713,-1.199,13.089)
C8: (7.286,-1.238,11.715)
O2': (11.907,-0.148,11.100)
C6: (6.243,-2.026,8.444)
C5: (6.809,-1.721,9.703)
C4: (8.193,-1.691,9.774)
P: (7.306,0.666,16.071)
C4': (10.316,0.019,13.601)
C2': (10.517,0.076,11.263)
C2: (8.408,-2.196,7.628)
N1: (7.086,-2.262,7.410)
N3: (9.053,-1.920,8.766)
N6: (4.923,-2.089,8.231)
N7: (6.247,-1.433,10.934)
N9: (8.493,-1.380,11.083)
O5': (8.256,0.615,14.780)
O3': (11.037,2.111,12.587)
OP2: (5.921,0.939,15.622)
C3': (10.163,0.989,12.440)
C1': (9.823,-1.223,11.674)
C5': (9.669,0.440,14.912)
O4': (9.713,-1.199,13.089)
C8: (7.286,-1.238,11.715)
O2': (11.907,-0.148,11.100)
C6: (6.243,-2.026,8.444)
C5: (6.809,-1.721,9.703)
C4: (8.193,-1.691,9.774)
P: (7.306,0.666,16.071)
C4': (10.316,0.019,13.601)
C2': (10.517,0.076,11.263)
C2: (8.408,-2.196,7.628)
N1: (7.086,-2.262,7.410)
N3: (9.053,-1.920,8.766)
N6: (4.923,-2.089,8.231)
N7: (6.247,-1.433,10.934)
N9: (8.493,-1.380,11.083)
O5': (8.256,0.615,14.780)
O3': (11.037,2.111,12.587)
Image (generated by PyMOL):