Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A497:A493
Extra
PDB:
ATOM 1 O3' A A 496 14.492 152.460 62.790 1.00 54.44 O
ATOM 2 P A A 497 14.635 153.859 63.519 1.00 53.45 P
ATOM 3 OP1 A A 497 13.892 153.786 64.787 1.00 56.10 O
ATOM 4 OP2 A A 497 14.310 154.893 62.529 1.00 55.07 O
ATOM 5 O5' A A 497 16.164 153.953 63.885 1.00 54.54 O
ATOM 6 C5' A A 497 17.110 154.187 62.873 1.00 55.89 C
ATOM 7 C4' A A 497 18.478 154.078 63.449 1.00 59.40 C
ATOM 8 O4' A A 497 19.445 154.370 62.417 1.00 59.48 O
ATOM 9 C3' A A 497 18.746 155.069 64.572 1.00 61.68 C
ATOM 10 O3' A A 497 19.668 154.536 65.510 1.00 65.28 O
ATOM 11 C2' A A 497 19.285 156.284 63.826 1.00 61.28 C
ATOM 12 O2' A A 497 20.212 157.029 64.590 1.00 61.28 O
ATOM 13 C1' A A 497 19.970 155.660 62.611 1.00 59.50 C
ATOM 14 N9 A A 497 19.750 156.422 61.383 1.00 57.94 N
ATOM 15 C8 A A 497 18.804 157.375 61.081 1.00 57.13 C
ATOM 16 N7 A A 497 18.954 157.905 59.895 1.00 56.62 N
ATOM 17 C5 A A 497 20.058 157.245 59.375 1.00 57.34 C
ATOM 18 C6 A A 497 20.752 157.360 58.150 1.00 58.24 C
ATOM 19 N6 A A 497 20.430 158.220 57.182 1.00 59.04 N
ATOM 20 N1 A A 497 21.814 156.553 57.956 1.00 57.34 N
ATOM 21 C2 A A 497 22.150 155.698 58.926 1.00 57.37 C
ATOM 22 N3 A A 497 21.584 155.501 60.109 1.00 56.85 N
ATOM 23 C4 A A 497 20.539 156.318 60.274 1.00 56.83 C
ATOM 24 P U A 498 19.452 154.788 67.090 1.00 68.50 P
ATOM 25 OP1 U A 498 18.008 154.816 67.458 1.00 66.58 O
ATOM 26 OP2 U A 498 20.324 155.922 67.481 1.00 67.72 O
ATOM 27 O5' U A 498 20.076 153.466 67.705 1.00 70.93 O
TER
ATOM 1 O3' G B 492 12.673 165.690 57.783 1.00 58.03 O
ATOM 2 P C B 493 12.093 164.214 57.518 1.00 57.28 P
ATOM 3 OP1 C B 493 10.990 164.379 56.557 1.00 58.55 O
ATOM 4 OP2 C B 493 11.849 163.507 58.808 1.00 58.10 O
ATOM 5 O5' C B 493 13.255 163.483 56.729 1.00 54.49 O
ATOM 6 C5' C B 493 13.724 164.010 55.482 1.00 54.78 C
ATOM 7 C4' C B 493 14.817 163.136 54.950 1.00 54.27 C
ATOM 8 O4' C B 493 15.896 163.128 55.913 1.00 54.23 O
ATOM 9 C3' C B 493 14.416 161.679 54.832 1.00 54.27 C
ATOM 10 O3' C B 493 13.724 161.450 53.606 1.00 53.58 O
ATOM 11 C2' C B 493 15.749 160.951 54.957 1.00 54.01 C
ATOM 12 O2' C B 493 16.494 160.921 53.755 1.00 52.94 O
ATOM 13 C1' C B 493 16.459 161.829 55.989 1.00 53.13 C
ATOM 14 N1 C B 493 16.356 161.349 57.377 1.00 52.41 N
ATOM 15 C2 C B 493 17.185 160.313 57.768 1.00 51.11 C
ATOM 16 O2 C B 493 17.908 159.780 56.916 1.00 50.54 O
ATOM 17 N3 C B 493 17.174 159.903 59.054 1.00 50.07 N
ATOM 18 C4 C B 493 16.354 160.481 59.933 1.00 50.23 C
ATOM 19 N4 C B 493 16.405 160.071 61.204 1.00 49.03 N
ATOM 20 C5 C B 493 15.455 161.512 59.552 1.00 51.18 C
ATOM 21 C6 C B 493 15.488 161.914 58.273 1.00 52.89 C
ATOM 22 P G B 494 12.447 160.470 53.577 1.00 51.74 P
ATOM 23 OP1 G B 494 11.937 160.470 52.192 1.00 52.81 O
ATOM 24 OP2 G B 494 11.531 160.793 54.707 1.00 49.29 O
ATOM 25 O5' G B 494 13.071 159.034 53.799 1.00 51.82 O
TER
ATOM 2 P A A 497 14.635 153.859 63.519 1.00 53.45 P
ATOM 3 OP1 A A 497 13.892 153.786 64.787 1.00 56.10 O
ATOM 4 OP2 A A 497 14.310 154.893 62.529 1.00 55.07 O
ATOM 5 O5' A A 497 16.164 153.953 63.885 1.00 54.54 O
ATOM 6 C5' A A 497 17.110 154.187 62.873 1.00 55.89 C
ATOM 7 C4' A A 497 18.478 154.078 63.449 1.00 59.40 C
ATOM 8 O4' A A 497 19.445 154.370 62.417 1.00 59.48 O
ATOM 9 C3' A A 497 18.746 155.069 64.572 1.00 61.68 C
ATOM 10 O3' A A 497 19.668 154.536 65.510 1.00 65.28 O
ATOM 11 C2' A A 497 19.285 156.284 63.826 1.00 61.28 C
ATOM 12 O2' A A 497 20.212 157.029 64.590 1.00 61.28 O
ATOM 13 C1' A A 497 19.970 155.660 62.611 1.00 59.50 C
ATOM 14 N9 A A 497 19.750 156.422 61.383 1.00 57.94 N
ATOM 15 C8 A A 497 18.804 157.375 61.081 1.00 57.13 C
ATOM 16 N7 A A 497 18.954 157.905 59.895 1.00 56.62 N
ATOM 17 C5 A A 497 20.058 157.245 59.375 1.00 57.34 C
ATOM 18 C6 A A 497 20.752 157.360 58.150 1.00 58.24 C
ATOM 19 N6 A A 497 20.430 158.220 57.182 1.00 59.04 N
ATOM 20 N1 A A 497 21.814 156.553 57.956 1.00 57.34 N
ATOM 21 C2 A A 497 22.150 155.698 58.926 1.00 57.37 C
ATOM 22 N3 A A 497 21.584 155.501 60.109 1.00 56.85 N
ATOM 23 C4 A A 497 20.539 156.318 60.274 1.00 56.83 C
ATOM 24 P U A 498 19.452 154.788 67.090 1.00 68.50 P
ATOM 25 OP1 U A 498 18.008 154.816 67.458 1.00 66.58 O
ATOM 26 OP2 U A 498 20.324 155.922 67.481 1.00 67.72 O
ATOM 27 O5' U A 498 20.076 153.466 67.705 1.00 70.93 O
TER
ATOM 1 O3' G B 492 12.673 165.690 57.783 1.00 58.03 O
ATOM 2 P C B 493 12.093 164.214 57.518 1.00 57.28 P
ATOM 3 OP1 C B 493 10.990 164.379 56.557 1.00 58.55 O
ATOM 4 OP2 C B 493 11.849 163.507 58.808 1.00 58.10 O
ATOM 5 O5' C B 493 13.255 163.483 56.729 1.00 54.49 O
ATOM 6 C5' C B 493 13.724 164.010 55.482 1.00 54.78 C
ATOM 7 C4' C B 493 14.817 163.136 54.950 1.00 54.27 C
ATOM 8 O4' C B 493 15.896 163.128 55.913 1.00 54.23 O
ATOM 9 C3' C B 493 14.416 161.679 54.832 1.00 54.27 C
ATOM 10 O3' C B 493 13.724 161.450 53.606 1.00 53.58 O
ATOM 11 C2' C B 493 15.749 160.951 54.957 1.00 54.01 C
ATOM 12 O2' C B 493 16.494 160.921 53.755 1.00 52.94 O
ATOM 13 C1' C B 493 16.459 161.829 55.989 1.00 53.13 C
ATOM 14 N1 C B 493 16.356 161.349 57.377 1.00 52.41 N
ATOM 15 C2 C B 493 17.185 160.313 57.768 1.00 51.11 C
ATOM 16 O2 C B 493 17.908 159.780 56.916 1.00 50.54 O
ATOM 17 N3 C B 493 17.174 159.903 59.054 1.00 50.07 N
ATOM 18 C4 C B 493 16.354 160.481 59.933 1.00 50.23 C
ATOM 19 N4 C B 493 16.405 160.071 61.204 1.00 49.03 N
ATOM 20 C5 C B 493 15.455 161.512 59.552 1.00 51.18 C
ATOM 21 C6 C B 493 15.488 161.914 58.273 1.00 52.89 C
ATOM 22 P G B 494 12.447 160.470 53.577 1.00 51.74 P
ATOM 23 OP1 G B 494 11.937 160.470 52.192 1.00 52.81 O
ATOM 24 OP2 G B 494 11.531 160.793 54.707 1.00 49.29 O
ATOM 25 O5' G B 494 13.071 159.034 53.799 1.00 51.82 O
TER
Atoms:
OP1: (13.892,153.786,64.787)
OP2: (14.310,154.893,62.529)
C3': (18.746,155.069,64.572)
C1': (19.970,155.660,62.611)
C5': (17.110,154.187,62.873)
O4': (19.445,154.370,62.417)
C8: (18.804,157.375,61.081)
O2': (20.212,157.029,64.590)
C6: (20.752,157.360,58.150)
C5: (20.058,157.245,59.375)
C4: (20.539,156.318,60.274)
P: (14.635,153.859,63.519)
C4': (18.478,154.078,63.449)
C2': (19.285,156.284,63.826)
C2: (22.150,155.698,58.926)
N1: (21.814,156.553,57.956)
N3: (21.584,155.501,60.109)
N6: (20.430,158.220,57.182)
N7: (18.954,157.905,59.895)
N9: (19.750,156.422,61.383)
O5': (16.164,153.953,63.885)
O3': (19.668,154.536,65.510)
OP2: (14.310,154.893,62.529)
C3': (18.746,155.069,64.572)
C1': (19.970,155.660,62.611)
C5': (17.110,154.187,62.873)
O4': (19.445,154.370,62.417)
C8: (18.804,157.375,61.081)
O2': (20.212,157.029,64.590)
C6: (20.752,157.360,58.150)
C5: (20.058,157.245,59.375)
C4: (20.539,156.318,60.274)
P: (14.635,153.859,63.519)
C4': (18.478,154.078,63.449)
C2': (19.285,156.284,63.826)
C2: (22.150,155.698,58.926)
N1: (21.814,156.553,57.956)
N3: (21.584,155.501,60.109)
N6: (20.430,158.220,57.182)
N7: (18.954,157.905,59.895)
N9: (19.750,156.422,61.383)
O5': (16.164,153.953,63.885)
O3': (19.668,154.536,65.510)
C2: (17.185,160.313,57.768)
OP1: (10.990,164.379,56.557)
OP2: (11.849,163.507,58.808)
C4: (16.354,160.481,59.933)
O5': (13.255,163.483,56.729)
C3': (14.416,161.679,54.832)
C1': (16.459,161.829,55.989)
O4': (15.896,163.128,55.913)
C5': (13.724,164.010,55.482)
P: (12.093,164.214,57.518)
O2: (17.908,159.780,56.916)
C4': (14.817,163.136,54.950)
C2': (15.749,160.951,54.957)
O2': (16.494,160.921,53.755)
N1: (16.356,161.349,57.377)
N3: (17.174,159.903,59.054)
N4: (16.405,160.071,61.204)
C6: (15.488,161.914,58.273)
C5: (15.455,161.512,59.552)
O3': (13.724,161.450,53.606)
OP1: (10.990,164.379,56.557)
OP2: (11.849,163.507,58.808)
C4: (16.354,160.481,59.933)
O5': (13.255,163.483,56.729)
C3': (14.416,161.679,54.832)
C1': (16.459,161.829,55.989)
O4': (15.896,163.128,55.913)
C5': (13.724,164.010,55.482)
P: (12.093,164.214,57.518)
O2: (17.908,159.780,56.916)
C4': (14.817,163.136,54.950)
C2': (15.749,160.951,54.957)
O2': (16.494,160.921,53.755)
N1: (16.356,161.349,57.377)
N3: (17.174,159.903,59.054)
N4: (16.405,160.071,61.204)
C6: (15.488,161.914,58.273)
C5: (15.455,161.512,59.552)
O3': (13.724,161.450,53.606)
Image (generated by PyMOL):